GBrowse Details

Vigan.07G233700.01

Basic Information:
Name: Vigan.07G233700.01
Multiple alignment
Variant Information
Position: Chr07:31655538..31657334 (+ strand)
Length: 1797
Functional Information:
Description: Similar to Uncharacterized protein. [I1LLD6, Glycine max]
GO: Biological Process: phosphorelay signal transduction system (GO:0000160)
Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: phosphorelay response regulator activity (GO:0000156)
InterPro: Signal transduction response regulator, receiver domain (IPR001789)
CheY-like superfamily (IPR011006)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.07,11.91,0.87,26.76,3.52,5.42,9.97
Automatic updates:
Name: NM_001255250 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max two-component response regulator ARR9-like (LOC100818762), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:31655538..31656037 (+ strand)
Length: 500
Type: five_prime_UTR
Position: Chr07:31656038..31656140 (+ strand)
Length: 103
Type: CDS
Position: Chr07:31656265..31656368 (+ strand)
Length: 104
Type: CDS
Position: Chr07:31656461..31656538 (+ strand)
Length: 78
Type: CDS
Position: Chr07:31656673..31656743 (+ strand)
Length: 71
Type: CDS
Position: Chr07:31656872..31657079 (+ strand)
Length: 208
Type: CDS
Position: Chr07:31657080..31657334 (+ strand)
Length: 255
Type: three_prime_UTR


>Vigan.07G233700.01
ATAGAATAGA GTTCACACGA CTCTGAACAG TGAGAAGAAT GACGACAACA ACGTTTGATA ATTAAGAATA ATAGTTTGGT
CTGATGAAAG GGTAATGGAT TAAGGAGAAG AGAAGAGAAT AGTTTTTTGT CTTTAACCCT AAGCAAAAGG GTGAAATAGA
ATAATGAAAA GAATAGTAAT AATGAACAAG TCAGATTTTG ATGTGTTTGG TACAATAACA GCACTTTCTT TGCTTGTTTT
TCAATTCAAA AATCAACCCA AAAGATCCGC CAGATTCTTG ATGAAATCTG TCGGATCTTG CTTTCCAAAC TGTCAGATTT
CCTTCGTGGA TTTTCTATCT TCTTGACCAT GATGTGCCCC CTTTTAAAAT CTCTGCATGC CACCCTCTTT CATCACATTT
CAGCACTCTT TTCATCTTTT TCCCTTCTTC TTTTCTTCTT ATTCTTCTTA TTCTTCTCCT GTTTTCGCCT GCAACTGCAC
ACATCGTTAT CATAATAATC ATGGGTATGG CTGCAGAGGC ACAGTTTCAT GTTTTGGCTG TTGATGATAG CCTTATCGAC
AGAATGTTGA TTGAGAGACT CCTCAAAACC TCTTCTTTTC ATGTTACTGC TGTGGATTCT GGTAGTAAGG CTTTGAGGTT
TCTTGGTTTG GTTGAAGATG AGAAGAGAAC TGAAGAGCCT CCCACCATTG CTTTACAAGC CAATCAGGAT GTAGAAGTAA
ACCTGATCAT AACTGATTAC TGTATGCCAG AAATGACAGG ATATGATCTG CTGAGAAAAA TCAAGGAATC TAAATCTCTT
AAAGACATAC CAGTGGTGAT TATGTCCTCA GAGAATGTTC CATCAAGGAT CAACAGATGC CTAGAAGATG GAGCTGATGA
ATTCTTTTTG AAACCAGTTC AACAGTCAGA TGTGAACAGG CTGAGACCTC ATCTGATGAA ATCAAAAGTT AAGGATGAAG
AAGAGGAACA GATCAATAAC AAAAGGAAGG AAACAGAAGA AGAAGAAGAG CATTCCCCAG ATAAAACCAG GACAAAAATG
GAGCCTCAAA AAGTGGTTAA TTGAAGTTAA AAACTTGATG AAACATCATA GATTGTACCT AAAACATTTA CCTCTCCTCT
GCCTCACCAG CTAACAAGTG AGAAGAGTAG ATCGCACCTC AATCATACTA AAGAAATCTC TAGTATAGCA CCTGACAAAA
CAGATTTCAT TTTTCATTCA ATTTTCTGAC ACATAATTTA TACTTTTTCT CTTATATCTC CAATTCACCA CAAGATTTCT
TTTTTCTTGC CTGTTAGCAA CCCCTTTCGG AAGGTAAAA

>Vigan.07G233700.01
ATGGGTATGG CTGCAGAGGC ACAGTTTCAT GTTTTGGCTG TTGATGATAG CCTTATCGAC AGAATGTTGA TTGAGAGACT
CCTCAAAACC TCTTCTTTTC ATGTTACTGC TGTGGATTCT GGTAGTAAGG CTTTGAGGTT TCTTGGTTTG GTTGAAGATG
AGAAGAGAAC TGAAGAGCCT CCCACCATTG CTTTACAAGC CAATCAGGAT GTAGAAGTAA ACCTGATCAT AACTGATTAC
TGTATGCCAG AAATGACAGG ATATGATCTG CTGAGAAAAA TCAAGGAATC TAAATCTCTT AAAGACATAC CAGTGGTGAT
TATGTCCTCA GAGAATGTTC CATCAAGGAT CAACAGATGC CTAGAAGATG GAGCTGATGA ATTCTTTTTG AAACCAGTTC
AACAGTCAGA TGTGAACAGG CTGAGACCTC ATCTGATGAA ATCAAAAGTT AAGGATGAAG AAGAGGAACA GATCAATAAC
AAAAGGAAGG AAACAGAAGA AGAAGAAGAG CATTCCCCAG ATAAAACCAG GACAAAAATG GAGCCTCAAA AAGTGGTTAA
TTGA

>Vigan.07G233700.01
MGMAAEAQFH VLAVDDSLID RMLIERLLKT SSFHVTAVDS GSKALRFLGL VEDEKRTEEP PTIALQANQD VEVNLIITDY
CMPEMTGYDL LRKIKESKSL KDIPVVIMSS ENVPSRINRC LEDGADEFFL KPVQQSDVNR LRPHLMKSKV KDEEEEQINN
KRKETEEEEE HSPDKTRTKM EPQKVVN*