GBrowse Details

Vigan.07G238500.01

Basic Information:
Name: Vigan.07G238500.01
Multiple alignment
Variant Information
Position: Chr07:32136722..32138582 (+ strand)
Length: 1861
Functional Information:
Description: Similar to NADPH:quinone oxidoreductase-like. [XP_008231677.1, Prunus mume]
GO: Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: NADPH-dependent FMN reductase-like (IPR005025)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:54.73,17.48,10.44,26.42,11.21,9.18,86.68,11.21
Arabidopsis thaliana homolog: AT3G27890.1
Automatic updates:
Name: NM_001248934 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative NADPH:quinone oxidoreductase (LOC100305983), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249757 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526972 (LOC100526972), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:32136722..32136813 (+ strand)
Length: 92
Type: five_prime_UTR
Position: Chr07:32136814..32136913 (+ strand)
Length: 100
Type: CDS
Position: Chr07:32136990..32137181 (+ strand)
Length: 192
Type: CDS
Position: Chr07:32137965..32138269 (+ strand)
Length: 305
Type: CDS
Position: Chr07:32138270..32138582 (+ strand)
Length: 313
Type: three_prime_UTR


>Vigan.07G238500.01
CTATAAAGAA AGAAAAACTG ATTTGATTTT TAGTTATAAA CTTCCCTCGT CATTGTTTGG AGTCAACGAA AGAAGCCACA
CAGCAAAGAA ACATGGCAGC GGTGGCCGGA GCATCCTCGT CGCTGATTAA AGTGGCGGCG CTTTCCGGTT CTCTTCGGAA
AGGCTCTTAC AACAGAGGCC TGGTTCGTGC TGCGATTGAA CTGAGCAAAG AAAGGAATGT GGGACTTCAG ATCGAGTACG
TTGATATTTC GCCTTTGCCC TTTTTGAACA CGGATCTTGA GATAAACGGC ACTTACCCAT CCGAAGTTGA AGCGTTTCGC
CAGAAGATTG TTGCAGCTGA TAGCATCCTC TTTGCTTCCC CTGAATACAA TTACTCTGTT ACAGGACCAC TAAAAAATGC
AATTGACTGG GCATCAAGAG CACCAAATGT TTGGGCTGGT AAACCTGCTG CCATAGTGAG TGCTGGAGGA GGCTTTGGTG
GGGGAAGATC ACAGTATCAT CTACGCCAAA TTGGAGTATT TTTGGATCTT CATTTCATCA ACAAACCTGA ATTCTTCATC
AATGCATTCC AGCCACCAGC AAAGTTTAAC AGTGATGGTG ACTTGATTGA TGAAGATGCC AAAATTAGGT TGAAGGAAAT
CCTTCTGTCC TTGAAGACAT TTACCCTTAG ACTTCAAGGG AAAAATTGAG ACAACCATGA TTCCCAAAAA GTGTTGAATG
GATTTTGGCT CATACCTTTT ATGACTGCAT GAAAACTGTT GTCTGCAAAG ACAAGATAAC GTACATGTTT TTACATTTTG
CAACTTTTGT CTATATTGGT GTGTCGTGGT TTGTTTTGTT GCTATTTGAG TAAAATCTAC ATGCCTTAAA CTATCTTCAA
TTCTATGACG TGATATGGCC ATGCATGGGC TTTCTGTTAT ATCAGTTTCC TATATCAATC TATATATTTG TAATATAACA
CAGATCTATC CCTTCATTCA TAATAATAAT TCCTTTCTTC CA

>Vigan.07G238500.01
ATGGCAGCGG TGGCCGGAGC ATCCTCGTCG CTGATTAAAG TGGCGGCGCT TTCCGGTTCT CTTCGGAAAG GCTCTTACAA
CAGAGGCCTG GTTCGTGCTG CGATTGAACT GAGCAAAGAA AGGAATGTGG GACTTCAGAT CGAGTACGTT GATATTTCGC
CTTTGCCCTT TTTGAACACG GATCTTGAGA TAAACGGCAC TTACCCATCC GAAGTTGAAG CGTTTCGCCA GAAGATTGTT
GCAGCTGATA GCATCCTCTT TGCTTCCCCT GAATACAATT ACTCTGTTAC AGGACCACTA AAAAATGCAA TTGACTGGGC
ATCAAGAGCA CCAAATGTTT GGGCTGGTAA ACCTGCTGCC ATAGTGAGTG CTGGAGGAGG CTTTGGTGGG GGAAGATCAC
AGTATCATCT ACGCCAAATT GGAGTATTTT TGGATCTTCA TTTCATCAAC AAACCTGAAT TCTTCATCAA TGCATTCCAG
CCACCAGCAA AGTTTAACAG TGATGGTGAC TTGATTGATG AAGATGCCAA AATTAGGTTG AAGGAAATCC TTCTGTCCTT
GAAGACATTT ACCCTTAGAC TTCAAGGGAA AAATTGA

>Vigan.07G238500.01
MAAVAGASSS LIKVAALSGS LRKGSYNRGL VRAAIELSKE RNVGLQIEYV DISPLPFLNT DLEINGTYPS EVEAFRQKIV
AADSILFASP EYNYSVTGPL KNAIDWASRA PNVWAGKPAA IVSAGGGFGG GRSQYHLRQI GVFLDLHFIN KPEFFINAFQ
PPAKFNSDGD LIDEDAKIRL KEILLSLKTF TLRLQGKN*