GBrowse Details

Vigan.07G244600.01

Basic Information:
Name: Vigan.07G244600.01
Multiple alignment
Variant Information
Position: Chr07:33342736..33353888 (+ strand)
Length: 11153
Functional Information:
Description: Similar to Uncharacterized protein. [I1LKG1, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: WD40 repeat (IPR001680)
F-box domain (IPR001810)
WD40/YVTN repeat-like-containing domain (IPR015943)
WD40-repeat-containing domain (IPR017986)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.72,8.21,4.27,11.73,2.91,3.71,5.14,5.10
Arabidopsis thaliana homolog: AT3G52030.1
Automatic updates:
Name: BT097347 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-21L20 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:33342736..33342919 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr07:33342920..33343107 (+ strand)
Length: 188
Type: CDS
Position: Chr07:33343218..33343400 (+ strand)
Length: 183
Type: CDS
Position: Chr07:33344518..33344572 (+ strand)
Length: 55
Type: CDS
Position: Chr07:33348915..33349013 (+ strand)
Length: 99
Type: CDS
Position: Chr07:33350575..33350678 (+ strand)
Length: 104
Type: CDS
Position: Chr07:33351307..33351396 (+ strand)
Length: 90
Type: CDS
Position: Chr07:33351786..33351925 (+ strand)
Length: 140
Type: CDS
Position: Chr07:33352725..33352809 (+ strand)
Length: 85
Type: CDS
Position: Chr07:33353377..33353746 (+ strand)
Length: 370
Type: CDS
Position: Chr07:33353747..33353888 (+ strand)
Length: 142
Type: three_prime_UTR


>Vigan.07G244600.01
CCTCATTCAA AATATACACA TCACTTCATG GAGTGGTGTG GTTACGTCTA TCACTCACCA CCCATTTTCT TAAGGTCACC
CCCGTTATCT CGGTTTTCCC TTCCGATTCT TCCTTCACCA TTTGCTCCGT TAAATCACTG TCTTAGTGTT CTGTCACTGT
GATTTTGATT CCCTCCTTTA AACAATGAAC AAACATCAAC AGAGTTTCAC GGCGGCGAAG AACGGTCCTT CGCCGGCGAC
CGCCGACCAA ATATATGAAC GGCGGAAAAC TCCGACGAAC ATACTGTCTC TAGACCCCGA CATCGTGTGC ACCATTTTCG
CTTTCCTCGA CATGTTCGAC CTCGTTCGTT GCTCCCTCGT TTGCAAACTC TGGAACGCCA TCGTCGAGTC CCGCTCGCTG
CGAGAGTTTT GTGAGAGGAA CATAAAGAAT TCGTCGTCTG AATTTACCGA AAAGCCCTTG AGGGTCATTT TAGGAGAGAT
GGTTATGGAG CAGCATAGAT TGGCTCTTCT AGATGGTGGC TTTTACGTTG ATCAGTGGAA GGGTCATTCA ACAACGGTTG
CTCAGTGCCG AATGAAAATG GGCGTGCTAG GTACTGGCGT GGGTGATAAG GTTATTCGTC TCTGGTCTTT AGACAGCTAC
AAATGCATAG AAGAACACTC AATGCCAGCT ATATTCCCTT TAATTGACTT TGATTTTGAT GAGAGCAAGA TTGTTGGTCT
AATTGGTAGC CATTTATGCA TATGGAGGCG GAATGGGAAA AGAAGCATAT TTCCTTCACT TGGAGGCAAA TTTGTAAAAG
GTTCATGCAT GCGCTATGTT GATCCAGAAG CTGTGGTTGG GTGTGATGAT GGAGCCGTTC GTGTTTTTGA CATGTACAGT
AGGAGATGTT CTCAAATATT AAGAATGCAC CCTGTACCAA TAACATGCTT ATGTTTGAAC GAAGATCGAT TGATAGTAAG
TGGCTCCACT TCAGGGGATA TAAGAATATC AGATCCATCC TCTGTTCAAC AGGTAGCAAC ACTTAGATCA AGTGATGTCA
GAGGCATAAG GACCATGTGC TTCAATCCCT CCTCTCAGCT ACTATTCGCA GGATCAGCTG TTGGATGTGC ATATTGTTGG
GACCTTAGAA CAAGGAAACT GTTGTGGAGC AGCCGAGTGT GTCCTAATGT TATATACTCC CTACAGCACA TGCAAAATGA
CACATCAACA TTAGTCGTTG GTGGAATAGA TGGTATCTTA AGATTGCTAA ATCAGAACGA TGGCAAAACT GTTGCTTGTT
TTTCTATGGA TGATAAATTG TTATCAACCT TTCAAAGTCC TTCTGGTTCC GTTCAAAGAA TAAAAGGGCA GAGGTTGCCC
GAGGATGACT TAATAAATAT TGAGCACCTC GTTTGTATAA CTGATCGACC TTCTATTACC TGCCTCGCTG TTGGAATGAA
GAAGATTGTT ACCACACACA ATACCAGTGA CATCAGATTA TGGAAATTCA GAAGCTGACA TTTCTTTGTA AAATTAAGTA
TTTAATTTTC CGAATAGTGT TTGTAAATAA TTATCTTTTT GAAGAGCTGT AGTGTGACGA AGAAAAGTTT ATCGTTCTAA
ATAATTATCA CTATTATATA ATCCATGAAT TTTATCAAGC 

>Vigan.07G244600.01
ATGAACAAAC ATCAACAGAG TTTCACGGCG GCGAAGAACG GTCCTTCGCC GGCGACCGCC GACCAAATAT ATGAACGGCG
GAAAACTCCG ACGAACATAC TGTCTCTAGA CCCCGACATC GTGTGCACCA TTTTCGCTTT CCTCGACATG TTCGACCTCG
TTCGTTGCTC CCTCGTTTGC AAACTCTGGA ACGCCATCGT CGAGTCCCGC TCGCTGCGAG AGTTTTGTGA GAGGAACATA
AAGAATTCGT CGTCTGAATT TACCGAAAAG CCCTTGAGGG TCATTTTAGG AGAGATGGTT ATGGAGCAGC ATAGATTGGC
TCTTCTAGAT GGTGGCTTTT ACGTTGATCA GTGGAAGGGT CATTCAACAA CGGTTGCTCA GTGCCGAATG AAAATGGGCG
TGCTAGGTAC TGGCGTGGGT GATAAGGTTA TTCGTCTCTG GTCTTTAGAC AGCTACAAAT GCATAGAAGA ACACTCAATG
CCAGCTATAT TCCCTTTAAT TGACTTTGAT TTTGATGAGA GCAAGATTGT TGGTCTAATT GGTAGCCATT TATGCATATG
GAGGCGGAAT GGGAAAAGAA GCATATTTCC TTCACTTGGA GGCAAATTTG TAAAAGGTTC ATGCATGCGC TATGTTGATC
CAGAAGCTGT GGTTGGGTGT GATGATGGAG CCGTTCGTGT TTTTGACATG TACAGTAGGA GATGTTCTCA AATATTAAGA
ATGCACCCTG TACCAATAAC ATGCTTATGT TTGAACGAAG ATCGATTGAT AGTAAGTGGC TCCACTTCAG GGGATATAAG
AATATCAGAT CCATCCTCTG TTCAACAGGT AGCAACACTT AGATCAAGTG ATGTCAGAGG CATAAGGACC ATGTGCTTCA
ATCCCTCCTC TCAGCTACTA TTCGCAGGAT CAGCTGTTGG ATGTGCATAT TGTTGGGACC TTAGAACAAG GAAACTGTTG
TGGAGCAGCC GAGTGTGTCC TAATGTTATA TACTCCCTAC AGCACATGCA AAATGACACA TCAACATTAG TCGTTGGTGG
AATAGATGGT ATCTTAAGAT TGCTAAATCA GAACGATGGC AAAACTGTTG CTTGTTTTTC TATGGATGAT AAATTGTTAT
CAACCTTTCA AAGTCCTTCT GGTTCCGTTC AAAGAATAAA AGGGCAGAGG TTGCCCGAGG ATGACTTAAT AAATATTGAG
CACCTCGTTT GTATAACTGA TCGACCTTCT ATTACCTGCC TCGCTGTTGG AATGAAGAAG ATTGTTACCA CACACAATAC
CAGTGACATC AGATTATGGA AATTCAGAAG CTGA

>Vigan.07G244600.01
MNKHQQSFTA AKNGPSPATA DQIYERRKTP TNILSLDPDI VCTIFAFLDM FDLVRCSLVC KLWNAIVESR SLREFCERNI
KNSSSEFTEK PLRVILGEMV MEQHRLALLD GGFYVDQWKG HSTTVAQCRM KMGVLGTGVG DKVIRLWSLD SYKCIEEHSM
PAIFPLIDFD FDESKIVGLI GSHLCIWRRN GKRSIFPSLG GKFVKGSCMR YVDPEAVVGC DDGAVRVFDM YSRRCSQILR
MHPVPITCLC LNEDRLIVSG STSGDIRISD PSSVQQVATL RSSDVRGIRT MCFNPSSQLL FAGSAVGCAY CWDLRTRKLL
WSSRVCPNVI YSLQHMQNDT STLVVGGIDG ILRLLNQNDG KTVACFSMDD KLLSTFQSPS GSVQRIKGQR LPEDDLINIE
HLVCITDRPS ITCLAVGMKK IVTTHNTSDI RLWKFRS*