GBrowse Details

Vigan.08G001200.01

Basic Information:
Name: Vigan.08G001200.01
Multiple alignment
Variant Information
Position: Chr08:58764..64742 (+ strand)
Length: 5979
Functional Information:
Description: Similar to 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X2. [XP_004497427.1, Cicer arietinum]
GO: Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)
InterPro: Amidohydrolase 1 (IPR006680)
Metal-dependent hydrolase, composite domain (IPR011059)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:50.11,41.95,23.06,19.14,26.41,17.20,18.51,26.11
Structure :
Position: Chr08:58764..58876 (+ strand)
Length: 113
Type: five_prime_UTR
Position: Chr08:58877..59081 (+ strand)
Length: 205
Type: CDS
Position: Chr08:59169..59500 (+ strand)
Length: 332
Type: CDS
Position: Chr08:61193..61342 (+ strand)
Length: 150
Type: CDS
Position: Chr08:61610..61753 (+ strand)
Length: 144
Type: CDS
Position: Chr08:61947..62103 (+ strand)
Length: 157
Type: CDS
Position: Chr08:62475..62647 (+ strand)
Length: 173
Type: CDS
Position: Chr08:63339..63394 (+ strand)
Length: 56
Type: CDS
Position: Chr08:63771..63873 (+ strand)
Length: 103
Type: CDS
Position: Chr08:64427..64516 (+ strand)
Length: 90
Type: CDS
Position: Chr08:64517..64742 (+ strand)
Length: 226
Type: three_prime_UTR


>Vigan.08G001200.01
ATTAGATAAC CCCCCGCCTT GACTTTGAAG ATACTGATTC AAGAAGAAAA AGTATAAAAT AAGTATACAT TTGTAGAGTA
AAGTAACCAA GAGAGGAGAA AGGGGCGGTG GAGATGGAGA GAGAGAGGGA GGTGGTGAGT GTGCTGCACG GTGGTATGAT
CATAACCATG GACGAGGAGC AGCGAGTGTT TAGGGACGGG GGAATCGTGA TCGAAGGAGA TAGAATCAAA GCTATTGGAC
AATCTGCACA AATTCTTGCT GAATTTTCTG ATGTGGCCCA CCACATCCTC GATCTCACCG GCCACATCTT ACTCCCTGGA
TTTATTAACA CCCACGTCCA TAGTTCCCAA CAACTCGCTA GAGGCATAGC CGATGATGTG GACTTGATGA CCTGGTTGCA
TCACCGCATC TGGCCCTACG AATCCAACAT GACCCAACAC GATTCTTACC TCTCTACTTT GCTTTGCGGG ATCGAGCTCA
TTCACTCCGG CGTAACCTGT TTTGCTGAAG CTGGGGGTCA ACATGTGTCT GAAATGGCTA GAGCAGTCAG TTTACTGGGT
CTGCGAGCTT GTTTAACCCA GTCCACCATG GACTCTGGCC ACGGTTTGCC TCCATCCTGG GCCACTCGTA CCACGGATCA
ATGCATTCAG TCTCAAAAGG ACAATTATGA CAAGTACCAC AACACAGCCC ATGGTCGCAT CAGAATCTGG TTCGGAATAC
GACAAATCAT GAACTCTACT CCTCGCTTGC TTATCGAAAC AAGAGATGCT GCAACACAAC TAAAAACTGG AATACACATG
CATGTTGCAG AGATACCGTA TGAGAACCAA CTAGTCAGGG ATGTTCACAA AGTAGATCAC GGAACTGTTA CATACTTGGA
CAAGATAGAT TTCCTTCAAA GCAATCTGCT AGCAGCTCAC TCAGTTTGGC TTGATAATAA CGAGATATCT CTTCTTTCAA
GATCAGGGGT CAAAGTGTCC CACTGTCCTG CTGCTGCAAT GCGAATGCTT GGATTTGCAC CTGTAAGGGA GATGCTTGAT
GCTGGCGTTT GTGTCTCTCT GGGAACTGAT GGGGCCCCAT CAAACAATCG CATGAGCATC GTTGATGAAA TGTACCTAGC
TTCTCTAATT AATAAAGGAC GGGAAGTTTA TGCTAATGGA ACCACAGATC CAACAGCATT GCCCGCTGAA ACTATTCTTA
GAATGGTTAC AGTTAATGGT GCAAAGTCGG TATTGTGGGA TGACGAACTA GGTTCTCTTG AGGTTGGGAA AAAGGCGGAC
ATTGTTGTAG TCAATCCTTC CTCTTGGCCT ATGGTTCCTG TTCATGACTG CATTTCCAGC ATAGTGTATT CCATGCGATC
AGAAAATGTG ATATCTGTCA TGTGCAATGG CGTGTGGATA ATGAAGAACA AGAAGATTAT ACACGTGGAC GAGGAAGAAG
TTATTTTGAA GGCAAAAGAG GCTTCTGTTG AACTTCTGAA GAGGGCAGGC ATAACATTAC CAAGCAGAAT GAACATGATT
TGAGTATTTG TTTTCAAGTG TATACAGATT GCTAATGCAA TACAGGAAAT AATGTATGCA CTATAGAGAC AGTACAGTAT
CCAATGAATT TAATTGTGTG GATGATGATA TTACAGAGTG AGCGTATGAC TGCATGACTC TGTAAATTGG TCAAGGGAGA
GATTGAATAT TTGAATATTC TTTAGTTTTT CAATTATCTT TTAACTATTA GTTGTCAAAA TCTAAACAT

>Vigan.08G001200.01
ATGGAGAGAG AGAGGGAGGT GGTGAGTGTG CTGCACGGTG GTATGATCAT AACCATGGAC GAGGAGCAGC GAGTGTTTAG
GGACGGGGGA ATCGTGATCG AAGGAGATAG AATCAAAGCT ATTGGACAAT CTGCACAAAT TCTTGCTGAA TTTTCTGATG
TGGCCCACCA CATCCTCGAT CTCACCGGCC ACATCTTACT CCCTGGATTT ATTAACACCC ACGTCCATAG TTCCCAACAA
CTCGCTAGAG GCATAGCCGA TGATGTGGAC TTGATGACCT GGTTGCATCA CCGCATCTGG CCCTACGAAT CCAACATGAC
CCAACACGAT TCTTACCTCT CTACTTTGCT TTGCGGGATC GAGCTCATTC ACTCCGGCGT AACCTGTTTT GCTGAAGCTG
GGGGTCAACA TGTGTCTGAA ATGGCTAGAG CAGTCAGTTT ACTGGGTCTG CGAGCTTGTT TAACCCAGTC CACCATGGAC
TCTGGCCACG GTTTGCCTCC ATCCTGGGCC ACTCGTACCA CGGATCAATG CATTCAGTCT CAAAAGGACA ATTATGACAA
GTACCACAAC ACAGCCCATG GTCGCATCAG AATCTGGTTC GGAATACGAC AAATCATGAA CTCTACTCCT CGCTTGCTTA
TCGAAACAAG AGATGCTGCA ACACAACTAA AAACTGGAAT ACACATGCAT GTTGCAGAGA TACCGTATGA GAACCAACTA
GTCAGGGATG TTCACAAAGT AGATCACGGA ACTGTTACAT ACTTGGACAA GATAGATTTC CTTCAAAGCA ATCTGCTAGC
AGCTCACTCA GTTTGGCTTG ATAATAACGA GATATCTCTT CTTTCAAGAT CAGGGGTCAA AGTGTCCCAC TGTCCTGCTG
CTGCAATGCG AATGCTTGGA TTTGCACCTG TAAGGGAGAT GCTTGATGCT GGCGTTTGTG TCTCTCTGGG AACTGATGGG
GCCCCATCAA ACAATCGCAT GAGCATCGTT GATGAAATGT ACCTAGCTTC TCTAATTAAT AAAGGACGGG AAGTTTATGC
TAATGGAACC ACAGATCCAA CAGCATTGCC CGCTGAAACT ATTCTTAGAA TGGTTACAGT TAATGGTGCA AAGTCGGTAT
TGTGGGATGA CGAACTAGGT TCTCTTGAGG TTGGGAAAAA GGCGGACATT GTTGTAGTCA ATCCTTCCTC TTGGCCTATG
GTTCCTGTTC ATGACTGCAT TTCCAGCATA GTGTATTCCA TGCGATCAGA AAATGTGATA TCTGTCATGT GCAATGGCGT
GTGGATAATG AAGAACAAGA AGATTATACA CGTGGACGAG GAAGAAGTTA TTTTGAAGGC AAAAGAGGCT TCTGTTGAAC
TTCTGAAGAG GGCAGGCATA ACATTACCAA GCAGAATGAA CATGATTTGA 

>Vigan.08G001200.01
MEREREVVSV LHGGMIITMD EEQRVFRDGG IVIEGDRIKA IGQSAQILAE FSDVAHHILD LTGHILLPGF INTHVHSSQQ
LARGIADDVD LMTWLHHRIW PYESNMTQHD SYLSTLLCGI ELIHSGVTCF AEAGGQHVSE MARAVSLLGL RACLTQSTMD
SGHGLPPSWA TRTTDQCIQS QKDNYDKYHN TAHGRIRIWF GIRQIMNSTP RLLIETRDAA TQLKTGIHMH VAEIPYENQL
VRDVHKVDHG TVTYLDKIDF LQSNLLAAHS VWLDNNEISL LSRSGVKVSH CPAAAMRMLG FAPVREMLDA GVCVSLGTDG
APSNNRMSIV DEMYLASLIN KGREVYANGT TDPTALPAET ILRMVTVNGA KSVLWDDELG SLEVGKKADI VVVNPSSWPM
VPVHDCISSI VYSMRSENVI SVMCNGVWIM KNKKIIHVDE EEVILKAKEA SVELLKRAGI TLPSRMNMI*