GBrowse Details

Vigan.08G011200.01

Basic Information:
Name: Vigan.08G011200.01
Multiple alignment
Variant Information
Position: Chr08:781558..784904 (+ strand)
Length: 3347
Functional Information:
Description: Similar to Glutathione S-transferase. [W9RCX8, Morus notabilis.]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:709.09,381.85,97.68,59.52,66.66,200.92,57.88,110.08
Arabidopsis thaliana homolog: AT1G75270.1
Automatic updates:
Name: KM818410 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818413 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR4) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001250008 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR4), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:781558..781732 (+ strand)
Length: 175
Type: five_prime_UTR
Position: Chr08:781733..781790 (+ strand)
Length: 58
Type: CDS
Position: Chr08:781894..781984 (+ strand)
Length: 91
Type: CDS
Position: Chr08:782055..782198 (+ strand)
Length: 144
Type: CDS
Position: Chr08:782555..782672 (+ strand)
Length: 118
Type: CDS
Position: Chr08:782750..782890 (+ strand)
Length: 141
Type: CDS
Position: Chr08:784575..784664 (+ strand)
Length: 90
Type: CDS
Position: Chr08:784665..784904 (+ strand)
Length: 240
Type: three_prime_UTR


>Vigan.08G011200.01
CTTAGAAATG CTATTTCTGC CTATGTCATT TAATTATTTA ATATTTAAAA AAAAATGACA GGAGCTGTCT GATAAAGGTT
CTAAGTGAAG CAGATCGTGC ACTGAGTTGG ATTCTCCTAG TTTCTGGTTT CTTCTTTTTT CCTCTGTCTC TCTTACATTT
GATCGTCCAT CGGAAATGGC TCTTGAGGTT GCTGTCAAGG CTGCTGCTGG TGCTCCAGAT GTTCTCGGAG ACTGTCCATT
TTGCCAAAGG GTCCTTTTAA CTTTAGAGGA GAAGAAGATT CCGTACAAGC TCAACCTAAT TGATCTCAGT AACAAACCCG
AATGGTTTTT GGGTGTGAAT CCTGAAGGAA AGGTGCCAGT GGCTCTTTTT GATGGAAAAT GGGTGCCTGA TTCTGATGTA
ATTGTGGGGA TTCTCCAAGA AAAGTACCCA GAAATCTCTC TCGTTACTCC TCCTGAATTT GCCACCGTGG GATCAAAGAT
ATTTGGGTCT TTTGTGAGTT TTCTTAAGAG CAAGGATCCG AATGATGGAA CAGAGCAAGC GTTGCTGGCT GAATTGAGTG
CTCTGGATGA ACATCTTAAG GCCCATGGTC CATATATTGC TGGGGAGAAA GTCACTGCTG TTGACCTGAG TTTGGCACCA
AAACTGTACC ATCTTGTGGT CGTACTTGGC CACTTCAAGA AATGGAGTGT TCCAGAAAGT TTGTCACATG TCCACATCTA
CACTAAGCTG CTCTTCTCCC GTGAGTCATT TGAGAAAACC AAGCCTCCAA AGGAAGAGTT TGTTATTGCT GGATGGGCAC
CAAAAGTGAA TGCTTGAAGT AGTTCTAAAT TATGAGGTAT CTGAACATCA TTTGTGTACT GTGACTGAAA CTTGTTAACA
ATAGGATGTT CAACTCATCA AGTTTAAGAA TGTGTTGTTC ACCTATTAAG TAATAATAAT AATAATAAAT ATGTAGTTTG
CTGGTGTGTA CATTATGAAT TTCAAAGCTA TATATACTTT ATTTCTTCAT CAATTGATTG TTAAATTACT ATGATTAATG
AGATGCCCTT CTGTTTA

>Vigan.08G011200.01
ATGGCTCTTG AGGTTGCTGT CAAGGCTGCT GCTGGTGCTC CAGATGTTCT CGGAGACTGT CCATTTTGCC AAAGGGTCCT
TTTAACTTTA GAGGAGAAGA AGATTCCGTA CAAGCTCAAC CTAATTGATC TCAGTAACAA ACCCGAATGG TTTTTGGGTG
TGAATCCTGA AGGAAAGGTG CCAGTGGCTC TTTTTGATGG AAAATGGGTG CCTGATTCTG ATGTAATTGT GGGGATTCTC
CAAGAAAAGT ACCCAGAAAT CTCTCTCGTT ACTCCTCCTG AATTTGCCAC CGTGGGATCA AAGATATTTG GGTCTTTTGT
GAGTTTTCTT AAGAGCAAGG ATCCGAATGA TGGAACAGAG CAAGCGTTGC TGGCTGAATT GAGTGCTCTG GATGAACATC
TTAAGGCCCA TGGTCCATAT ATTGCTGGGG AGAAAGTCAC TGCTGTTGAC CTGAGTTTGG CACCAAAACT GTACCATCTT
GTGGTCGTAC TTGGCCACTT CAAGAAATGG AGTGTTCCAG AAAGTTTGTC ACATGTCCAC ATCTACACTA AGCTGCTCTT
CTCCCGTGAG TCATTTGAGA AAACCAAGCC TCCAAAGGAA GAGTTTGTTA TTGCTGGATG GGCACCAAAA GTGAATGCTT
GA

>Vigan.08G011200.01
MALEVAVKAA AGAPDVLGDC PFCQRVLLTL EEKKIPYKLN LIDLSNKPEW FLGVNPEGKV PVALFDGKWV PDSDVIVGIL
QEKYPEISLV TPPEFATVGS KIFGSFVSFL KSKDPNDGTE QALLAELSAL DEHLKAHGPY IAGEKVTAVD LSLAPKLYHL
VVVLGHFKKW SVPESLSHVH IYTKLLFSRE SFEKTKPPKE EFVIAGWAPK VNA*