GBrowse Details

Vigan.08G022400.01

Basic Information:
Name: Vigan.08G022400.01
Multiple alignment
Variant Information
Position: Chr08:1669126..1672296 (- strand)
Length: 3171
Functional Information:
Description: Similar to uncharacterized protein. [C6T1U5, Glycine max]
GO: Biological Process: mitochondrial pyruvate transport (GO:0006850)
Cellular Component: mitochondrial inner membrane (GO:0005743)
InterPro: Mitochondrial pyruvate carrier (IPR005336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:39.56,24.11,18.22,12.53,24.05,26.61,28.31,13.79
Arabidopsis thaliana homolog: AT5G20090.1
Automatic updates:
Name: NM_001251638 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500468 (LOC100500468), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:1669126..1669354 (- strand)
Length: 229
Type: three_prime_UTR
Position: Chr08:1669355..1669394 (- strand)
Length: 40
Type: CDS
Position: Chr08:1670438..1670573 (- strand)
Length: 136
Type: CDS
Position: Chr08:1670663..1670717 (- strand)
Length: 55
Type: CDS
Position: Chr08:1670839..1670931 (- strand)
Length: 93
Type: CDS
Position: Chr08:1670932..1672296 (- strand)
Length: 1365
Type: five_prime_UTR


>Vigan.08G022400.01
GTGAAACGCA AATAGTGATG GCGTTTGAAG AGGTGTGAGT TGTTAAATCA AAAGCAATAA AACCCTTCCT TCAGATTTGA
CTCTCCGGCG CTGTCCTCGT CCGCATTGAA CAGGCGATTC TCATTCCTAC AGTTCTTGGT ATCTCTCATC TTCCCATTTC
TCTCCATCTT ATTCATTCTT GAGCATAATT TTTTAAATTC ATTCTATAAA CTACTCAGTA ATTTGACCTA ATTGAATCCT
TTTTATTATA ATACAACATT CTCTCCCACA ATCAACATCG ATTCTCTCTC CTTCTATCTT TAATTCCAGT TCTTGATATA
TCTCAGCTTC CTAATTCTCT CCATCTCATT CTTTCTTTAG TGTAATTATT GAAATTCATT CTATAAACTA CACTTAGTAA
TTTGACCTAA TTGAATCCCT TTTTATTATT ATACAACATT CTTTGTTCCA TCATTTTATT GATTGGCTGA ATCTAGACAG
TTACTCCTAT GTTTTTTTAT TTATTTAATT TTTTAATGGA TGCGAACGGT GTGTTGCCTG TTTGTACAGT AGACATTGCA
CACTAAAACG GGAAGTAAAT AAATGAAAGG ATAGGAGAAG AGAAGAAATC ATGCTTTTGT ATTGGCAAAT GTTTGATTAG
ATCTTCGTAG TCATACCTTT GTTTTGCTCT TTACAGAGAA GAATTAGAGG GAGTTTCTGC TTACCCTCTC AGTGGTTTAG
TGAATCTGTT GTGATCAGGG TTTATGACTT TGTTTGGTTA GAGAAACCGT TGTCAAGGAT CTCGAAAATC TAAAACTGAT
AAAATGATTG AAAGAGTAGC ACATAATTTT TCGGGGATTA TTACTAAATT ATTGTCATGT TTGGATTTCC CTTTTAGGAG
AAGAAAGCAT GAAAAAACAT GAAGAAAAAC TAAGTTTAAG TTATACATAA ACTATCTCTA GTGGATGAAA TTCAATTCAT
TTGTTCATCT TATTTTATTT TTTATAAGAT GACTGGAGGT TATGAAAATG TTTGTCCAAA CAGTATATAA ACAATTCATC
ATTTTGATAG CCATCAATAA CAGACTCAGA GGTCTCGTAG AACTGTTACA CTGTACTCCG TGATGTAGTG GGTGATTGCT
GACCTTTGTT TCTTCTTTCC TGTGAGTGGA ATAACTGTAT GATGCAATGG GATGTTATTG AATATGTAGG AGGGCTCATG
GTCATGAGTC TTTTTCTGAG AAACCACCTT ACTTTCACGT CTTACTTTGG CGGGTTTTAA TATTAAATAT ATATTTGCAT
TTTACATACA TAGTTATTAT ATTTCTGTTG TGTTGAAGTC ATCTTACAAT TTGTAATGAC AAATCAGAAG TAGCACCGGT
ATTGTATGGC TTCCTTCAGA GCATTTTGGA ACAGTCCAAT GGGTCCCAAA ACTACACACT TTTGGGGACC TGTTGCCAAC
TGGGGATTTG TGGCAGCTGG ATTAGCTGAC ATGAAGAAAC CTCCAGAAAT GATCTCTGGC AACATGACAG GAGCAATGTG
TATCTATTCA GCATTGTTCA TGAGATTTGC ATGGATGGTA CAGCCACGCA ATTATCTACT TTTTGTTTGT CATGCCTCAA
ATGAAACTGT TCAACTTTAT CAATTCTCTC GATGGGCAAG GGCAGAGGGG AATCTGTCTG ATAAGAAGGA GGAAACTTCA
TCTCAGTAAC ATGATGATAA CACTTTCCTC GGTGTAGTGA TTTAAAAGAT TTTGCATTTG AACTTGTCGA CGTTTGAATA
AGTGATCAGT GGTGGTAAGA AGGGCCTTGT GGAAACTGCT AAGGATTCTG GCCTAGTTCA GCAGAAGTCT AAATTATTTG
AAGGCGTATG GGTGGGTTTT ATATGTCTTA CATATTGACT GACCCATGAA TGTTTAATCT TAAAGCATAA ACAAAGAT

>Vigan.08G022400.01
ATGGCTTCCT TCAGAGCATT TTGGAACAGT CCAATGGGTC CCAAAACTAC ACACTTTTGG GGACCTGTTG CCAACTGGGG
ATTTGTGGCA GCTGGATTAG CTGACATGAA GAAACCTCCA GAAATGATCT CTGGCAACAT GACAGGAGCA ATGTGTATCT
ATTCAGCATT GTTCATGAGA TTTGCATGGA TGGTACAGCC ACGCAATTAT CTACTTTTTG TTTGTCATGC CTCAAATGAA
ACTGTTCAAC TTTATCAATT CTCTCGATGG GCAAGGGCAG AGGGGAATCT GTCTGATAAG AAGGAGGAAA CTTCATCTCA
GTAA

>Vigan.08G022400.01
MASFRAFWNS PMGPKTTHFW GPVANWGFVA AGLADMKKPP EMISGNMTGA MCIYSALFMR FAWMVQPRNY LLFVCHASNE
TVQLYQFSRW ARAEGNLSDK KEETSSQ*