VIGGS:GBrowse

Vigan.08G063400.01

Basic Information:

Name:	Vigan.08G063400.01 Multiple alignment Variant Information
Position:	Chr08:4926891..4927463 (+ strand)
Length:	573

Functional Information:

Description:	Similar to Uncharacterized protein. [I1GT73, Brachypodium distachyon]
Expression level (FPKM):	Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.19,3.32,0.00,18.19,14.20,15.96

Automatic updates:

Name:	NM_001364686 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max uncharacterized LOC100527065 (LOC100527065), mRNA.
PubMed ID:	20075913 NCBI(pubmed)
Status:	Known Variant

Structure :

[show][hide]Parts:

Position:	Chr08:4926891..4926963 (+ strand)
Length:	73
Type:	CDS

Position:	Chr08:4927321..4927463 (+ strand)
Length:	143
Type:	CDS

[hide all][show all]SEQUENCES

[show][hide][copy]EXON + INTRON

[show][hide][copy]TRANSCRIPT

>Vigan.08G063400.01
ATGGGGTGGC TGCAATCCCT CCTCTCTCCA CTCAAGAAGT TCTGGCTCCG CTTGAATTCA ACTCAAAAGA AGAGAAGAGG
GATTTACATT CTGTATGAAG ATGTCAAGTC TTGCCCCTAT GAGGACGTGC ACGTCCTCTG GTCAATACTG GTGGAACCGC
ATTCACCTTC TATGCCATCC AAAAAAATGA AGCCTTTGGA CCCAAGACAA AACTGA

[show][hide][copy]CDS

>Vigan.08G063400.01
ATGGGGTGGC TGCAATCCCT CCTCTCTCCA CTCAAGAAGT TCTGGCTCCG CTTGAATTCA ACTCAAAAGA AGAGAAGAGG
GATTTACATT CTGTATGAAG ATGTCAAGTC TTGCCCCTAT GAGGACGTGC ACGTCCTCTG GTCAATACTG GTGGAACCGC
ATTCACCTTC TATGCCATCC AAAAAAATGA AGCCTTTGGA CCCAAGACAA AACTGA

[show][hide][copy]PROTEIN

>Vigan.08G063400.01
MGWLQSLLSP LKKFWLRLNS TQKKRRGIYI LYEDVKSCPY EDVHVLWSIL VEPHSPSMPS KKMKPLDPRQ N*