GBrowse Details

Vigan.08G070900.01

Basic Information:
Name: Vigan.08G070900.01
Multiple alignment
Variant Information
Position: Chr08:5600110..5604210 (+ strand)
Length: 4101
Functional Information:
Description: Similar to Uncharacterized protein. [I1NGL3, Glycine max]
GO: Biological Process: sulfate assimilation (GO:0000103)
Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781)
InterPro: Sulphate adenylyltransferase (IPR002650)
Rossmann-like alpha/beta/alpha sandwich fold (IPR014729)
PUA-like domain (IPR015947)
Sulphate adenylyltransferase catalytic domain (IPR024951)
ATP-sulfurylase PUA-like domain (IPR025980)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:256.11,271.31,86.87,131.87,297.41,560.66,335.91,168.52
Arabidopsis thaliana homolog: AT1G19920.1, AT3G22890.1, AT4G14680.1, AT5G43780.1
Automatic updates:
Name: NM_001248739 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ATP sulfurylase (LOC547634), mRNA.
PubMed ID: 24584934 NCBI(pubmed)
23789618 NCBI(pubmed)
16684499 NCBI(pubmed)
16657005 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:5600110..5600406 (+ strand)
Length: 297
Type: five_prime_UTR
Position: Chr08:5600407..5600912 (+ strand)
Length: 506
Type: CDS
Position: Chr08:5602364..5602769 (+ strand)
Length: 406
Type: CDS
Position: Chr08:5602943..5603203 (+ strand)
Length: 261
Type: CDS
Position: Chr08:5603308..5603394 (+ strand)
Length: 87
Type: CDS
Position: Chr08:5603482..5603619 (+ strand)
Length: 138
Type: CDS
Position: Chr08:5603620..5604210 (+ strand)
Length: 591
Type: three_prime_UTR


>Vigan.08G070900.01
GCACAGTAAA GACAAAAGTA TCTCTCTCTA ACACGGGTAA AAAAGAAAGT GTCTAGGTTC ATCCTCTTGA ACCAGTCTCT
ATCAAAGGAA CCCCTTTAAA TATAAAATCC CAAACTCATC GTTTTTGAGC AACCCAGGTT GTCTGTTACG ATCAGCATCA
ATCAGAGTAA GAAAGCAAGT TCACAATTTG GGCCTCCTTC AATTACCCAT CTGCCCCTCC TTCTCCACTA ACTCAACCTT
TTCTATTTTA TAAAGCACAT TTTAATAAGG GTCCTCAACA CAACACAACT CACTTCAATG GCGTCCATGG CCACTTTTTT
CACCCAAACC TCCTTTCCCT CCCATTCTCT CTCAAAAACC TTCGACACCC ATTTCGCCAC TGCCCCGAAA GTCAACTCCT
GTGTCAGTTT CAGGGCGAGG AGGCAAGTGG GGGTGCGTGT TTCGAGCGGG TTGATCGAAC CTGACGGAGG GAAGCTGGTT
GAGCTCGTGG TGAAGGATTC GGAGAGAGAT TTGAAGAAGG GCGAGGCGCT GTCGTTGCCA AGGATCAAGC TTTCGCGAAT
CGACTTGCAG TGCGTTCACG TCCTCAGTGA AGGATGGGCC ACACCCCTCA AGGGCTTCAT GAAGGAAGCC GAGTTCCTCC
AAACGCTTCA TTTCAACTCG CTCCGACTCG ACGATGGCTC CATCGTCAAC ATGTCGGTGC CTATCGTCCT CGCCATCGAT
GATGAACAGA AGCATCGGAT CGGGGATAAC AAAAGGGTAG CTCTTTTCGA TTCCAAAGGA GACCCTGTTG CCATTCTCAA
TGATATTGAA ATTTATAAGC ACCCTAAAGA AGAAAGAATA GCCCGAACTT GGGGAACCAC TGCCCCTGGC CTACCTTATG
TTGAACAAAC AATAACCAAT GCTGGAAATT GGTTGATTGG GGGTGACCTA GAGGTCATTG AACCTATCAA GTACAATGAT
GGACTTGATC ATTTTCGGCT GTCCCCTGCA GAACTTCGTT CAGAGTTTAC AAGGCGCAAT GCTGATGCTG TTTTTGCCTT
CCAGCTCCGG AATCCTGTTC ACAATGGCCA TGCTTTGCTG ATGACCGACA CCCGAAGGAG GCTTCTTGAG ATGGGCTATA
AGAATCCTGT TCTCTTGCTT CATCCACTGG GAGGCTATAC CAAAGCTGAT GATGTCCCCC TTGACTGGAG AATGAAACAA
CACGAAAAGG TACTGGAGGA TGGTGTTCTT GATCCAGAGA CAACTGTTGT ATCTATATTC CCTTCTCCCA TGCACTATGC
TGGACCCACA GAGGTGCAGT GGCATGCAAA GGCTAGGATA AATGCAGGGG CTAACTTCTA CATTGTTGGT CGTGACCCTG
CAGGCATGAG CCATCCAGTT GAGAAAAGAG ATCTGTATGA TGCTGACCAT GGGAAGAAAG TATTGAGCAT GGCACCAGGA
TTAGAACGAC TGAACATTCT TCCTTTCAGG GTTGCTGCAT ATGACAAGAC TCAGGGTAAA ATGGCATTCT TTGACCCTTC
AAGGCCTCAG GACTTCCTGT TCATCTCAGG CACAAAGATG CGTACACTCG CAAGGAATAA AGAAAGTCCT CCAGATGGAT
TTATGTGCCC CGGTGGATGG AAGGTGCTGG TTGAATATTA TGATAGCTTG GTACCCTCAA GCAATGGCAA AGTGCCGGAA
GCTGTTCCAG CTTAATGTTG TATCATAATG TATATCTCAT GATGATTGGG AGAAACCTTA AGCTTACATA TTCTCCTTCT
AAAGGCCATA TATTCCTCCA GGATCCTGTG GTCCAATCTC TCTAATAATA ATAATGAAAA GTTTGGAGAG GCAGAAGCAC
ATACAAATTG CCTCTCTCTG TATGTATGGC ATTTACTCAC CTTTTGCACT TGCAGTGCAA TTGAGCTTGC CAGCTTTGTA
ATATAATCTG GTTGTGCTGA TTATTTGGTT GGATAGTTTT CGTTTACAAC ACTTTATTTC ATCGTTGTTT TAGTCGTGCG
GTCCTTTTTA TCAATTTAAA ACTCACTTCA ACCAAAAATT GATATTATTA CGCACATAAG ATTATTCCAT AGTAATTGGT
CCATTATTCT TAGGCGTCAC TTACACATTA TTACAATTAC GTTATTTATG TAAGTTACTG GCGGACCTGG GTGGACATTT
AAACCTTTTA TTTTTTTCAA ATTGCATGAA ATTATATTAA GTATTGCGTC CCTTAAATTT ATATATTGAC TCCAATGTAA
GAAGGTGTAA AATCATATTT GTGTAGTGAT AATGTTTATT AAATAA

>Vigan.08G070900.01
ATGGCGTCCA TGGCCACTTT TTTCACCCAA ACCTCCTTTC CCTCCCATTC TCTCTCAAAA ACCTTCGACA CCCATTTCGC
CACTGCCCCG AAAGTCAACT CCTGTGTCAG TTTCAGGGCG AGGAGGCAAG TGGGGGTGCG TGTTTCGAGC GGGTTGATCG
AACCTGACGG AGGGAAGCTG GTTGAGCTCG TGGTGAAGGA TTCGGAGAGA GATTTGAAGA AGGGCGAGGC GCTGTCGTTG
CCAAGGATCA AGCTTTCGCG AATCGACTTG CAGTGCGTTC ACGTCCTCAG TGAAGGATGG GCCACACCCC TCAAGGGCTT
CATGAAGGAA GCCGAGTTCC TCCAAACGCT TCATTTCAAC TCGCTCCGAC TCGACGATGG CTCCATCGTC AACATGTCGG
TGCCTATCGT CCTCGCCATC GATGATGAAC AGAAGCATCG GATCGGGGAT AACAAAAGGG TAGCTCTTTT CGATTCCAAA
GGAGACCCTG TTGCCATTCT CAATGATATT GAAATTTATA AGCACCCTAA AGAAGAAAGA ATAGCCCGAA CTTGGGGAAC
CACTGCCCCT GGCCTACCTT ATGTTGAACA AACAATAACC AATGCTGGAA ATTGGTTGAT TGGGGGTGAC CTAGAGGTCA
TTGAACCTAT CAAGTACAAT GATGGACTTG ATCATTTTCG GCTGTCCCCT GCAGAACTTC GTTCAGAGTT TACAAGGCGC
AATGCTGATG CTGTTTTTGC CTTCCAGCTC CGGAATCCTG TTCACAATGG CCATGCTTTG CTGATGACCG ACACCCGAAG
GAGGCTTCTT GAGATGGGCT ATAAGAATCC TGTTCTCTTG CTTCATCCAC TGGGAGGCTA TACCAAAGCT GATGATGTCC
CCCTTGACTG GAGAATGAAA CAACACGAAA AGGTACTGGA GGATGGTGTT CTTGATCCAG AGACAACTGT TGTATCTATA
TTCCCTTCTC CCATGCACTA TGCTGGACCC ACAGAGGTGC AGTGGCATGC AAAGGCTAGG ATAAATGCAG GGGCTAACTT
CTACATTGTT GGTCGTGACC CTGCAGGCAT GAGCCATCCA GTTGAGAAAA GAGATCTGTA TGATGCTGAC CATGGGAAGA
AAGTATTGAG CATGGCACCA GGATTAGAAC GACTGAACAT TCTTCCTTTC AGGGTTGCTG CATATGACAA GACTCAGGGT
AAAATGGCAT TCTTTGACCC TTCAAGGCCT CAGGACTTCC TGTTCATCTC AGGCACAAAG ATGCGTACAC TCGCAAGGAA
TAAAGAAAGT CCTCCAGATG GATTTATGTG CCCCGGTGGA TGGAAGGTGC TGGTTGAATA TTATGATAGC TTGGTACCCT
CAAGCAATGG CAAAGTGCCG GAAGCTGTTC CAGCTTAA

>Vigan.08G070900.01
MASMATFFTQ TSFPSHSLSK TFDTHFATAP KVNSCVSFRA RRQVGVRVSS GLIEPDGGKL VELVVKDSER DLKKGEALSL
PRIKLSRIDL QCVHVLSEGW ATPLKGFMKE AEFLQTLHFN SLRLDDGSIV NMSVPIVLAI DDEQKHRIGD NKRVALFDSK
GDPVAILNDI EIYKHPKEER IARTWGTTAP GLPYVEQTIT NAGNWLIGGD LEVIEPIKYN DGLDHFRLSP AELRSEFTRR
NADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPVLL LHPLGGYTKA DDVPLDWRMK QHEKVLEDGV LDPETTVVSI
FPSPMHYAGP TEVQWHAKAR INAGANFYIV GRDPAGMSHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
KMAFFDPSRP QDFLFISGTK MRTLARNKES PPDGFMCPGG WKVLVEYYDS LVPSSNGKVP EAVPA*