GBrowse Details

Vigan.08G073700.01

Basic Information:
Name: Vigan.08G073700.01
Multiple alignment
Variant Information
Position: Chr08:5848720..5852768 (+ strand)
Length: 4049
Functional Information:
Description: Similar to uncharacterized protein. [D7T1T6, Vitis vinifera]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.40,10.60,14.36,9.97,15.74,11.66,14.58,14.32
Arabidopsis thaliana homolog: AT5G51840.1
Automatic updates:
Name: BT095425 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-19I10 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:5848720..5848957 (+ strand)
Length: 238
Type: five_prime_UTR
Position: Chr08:5848958..5849041 (+ strand)
Length: 84
Type: CDS
Position: Chr08:5849119..5849150 (+ strand)
Length: 32
Type: CDS
Position: Chr08:5850758..5850855 (+ strand)
Length: 98
Type: CDS
Position: Chr08:5850970..5851052 (+ strand)
Length: 83
Type: CDS
Position: Chr08:5851673..5851750 (+ strand)
Length: 78
Type: CDS
Position: Chr08:5851823..5851921 (+ strand)
Length: 99
Type: CDS
Position: Chr08:5852308..5852601 (+ strand)
Length: 294
Type: CDS
Position: Chr08:5852602..5852768 (+ strand)
Length: 167
Type: three_prime_UTR


>Vigan.08G073700.01
GGCGACTCCG GCTAACGTGC TATGCACGTG CAAAAGATTG AATCATCCAT CCACGCTAAC TGAATCTGTA ACAGCGTGAC
ACAGGCCATC TCCGCTTTGG GTTCTTCAAA CCGCGTTTCT CTCGAACCGG ACGTCGTTGG ATACGGTCCA ACCGGGTTGA
AGCCGCTGCT TGGAAATCAC AGACCTGGAG GCGGCGGCAC ACGACGGATT TGTGGAATGC GAGTGATTGG ATTCCAAAAT
GACTTCGAAC CCTTCACTTC TCCCTGAGAT CGGACCTGAC GGTCTCGCTA AAGAAGCCCC CGTCATCAGC TACACAGAGA
AGATCATCGA AGCAGAACAG CTTCAATTGC AGAAATACAT TCAAGAAAAC TATTCTAAAA TTCGTGATGT GGAGCGTGAG
CTTGCAAATC TTTCACTGGA GATGAAACTT ACAGCTGGTC CGAAAAAAGC AGCACTTGAA CATTTGAGAA AGAAAATTGA
GACGTCAACA GAAAGAATCC GTGTGGCCAA GCTAAAGGAA GAGCAGGCAC GGAAGGTGTG GGAATCAGCC TCACAAGTAG
TACGAGATGA GGAAGCAATG AAACAAAAGC TATGTGAAGA CTTGAGTAAT CTGGTTCAAG AAAGCAGTAA CTCTCAGTTT
GCTCGGCTGG AGGAATTAAA AAGAAGATTG GAAGCTTTGA ATCCAAGTCG TGCATCAACT AATCTTTATC ATGATGGGAG
ATCGGCAGCT TCTTCTCAGG ATAGTACACC CCAGCATGGT TCCTCTGTCC CCAATGCAAA GGAGTCGAAT GAGGGATCAA
CCGAGAGCGT TTCCAACCAA AGTAATTGTC AGAAAGCTGC AGCGAGAAAT GGACCTAATC AGCAGCCACA TAATGAAGGC
GAAGGAAGAA GTAAGAAGAA AGTCAACTTG CAATCAAAAG GGAAGGGAAT TGGTGTTGTG ACCAAGGGTA GATCTTCAAC
TCCTGGCTGG ACTGGGGCTG GCTTCGATGT AGATGGCAGA ACCTGAGAGC ACTATACTAT CGTAAGATAT TACTGAACTA
AATATTTTTT TGGGTGAGAT GTCCATGGTA GGTACATATC CTTCCGTCCT TTGTTCTTGT TGCCCATTAA CTTGGAAGTG
TAATCTTCTT TCTCCCATTA TATTATTTCC GTGACAGTTG GTTTAGCCAT GAT

>Vigan.08G073700.01
ATGACTTCGA ACCCTTCACT TCTCCCTGAG ATCGGACCTG ACGGTCTCGC TAAAGAAGCC CCCGTCATCA GCTACACAGA
GAAGATCATC GAAGCAGAAC AGCTTCAATT GCAGAAATAC ATTCAAGAAA ACTATTCTAA AATTCGTGAT GTGGAGCGTG
AGCTTGCAAA TCTTTCACTG GAGATGAAAC TTACAGCTGG TCCGAAAAAA GCAGCACTTG AACATTTGAG AAAGAAAATT
GAGACGTCAA CAGAAAGAAT CCGTGTGGCC AAGCTAAAGG AAGAGCAGGC ACGGAAGGTG TGGGAATCAG CCTCACAAGT
AGTACGAGAT GAGGAAGCAA TGAAACAAAA GCTATGTGAA GACTTGAGTA ATCTGGTTCA AGAAAGCAGT AACTCTCAGT
TTGCTCGGCT GGAGGAATTA AAAAGAAGAT TGGAAGCTTT GAATCCAAGT CGTGCATCAA CTAATCTTTA TCATGATGGG
AGATCGGCAG CTTCTTCTCA GGATAGTACA CCCCAGCATG GTTCCTCTGT CCCCAATGCA AAGGAGTCGA ATGAGGGATC
AACCGAGAGC GTTTCCAACC AAAGTAATTG TCAGAAAGCT GCAGCGAGAA ATGGACCTAA TCAGCAGCCA CATAATGAAG
GCGAAGGAAG AAGTAAGAAG AAAGTCAACT TGCAATCAAA AGGGAAGGGA ATTGGTGTTG TGACCAAGGG TAGATCTTCA
ACTCCTGGCT GGACTGGGGC TGGCTTCGAT GTAGATGGCA GAACCTGA

>Vigan.08G073700.01
MTSNPSLLPE IGPDGLAKEA PVISYTEKII EAEQLQLQKY IQENYSKIRD VERELANLSL EMKLTAGPKK AALEHLRKKI
ETSTERIRVA KLKEEQARKV WESASQVVRD EEAMKQKLCE DLSNLVQESS NSQFARLEEL KRRLEALNPS RASTNLYHDG
RSAASSQDST PQHGSSVPNA KESNEGSTES VSNQSNCQKA AARNGPNQQP HNEGEGRSKK KVNLQSKGKG IGVVTKGRSS
TPGWTGAGFD VDGRT*