GBrowse Details

Vigan.08G077700.01

Basic Information:
Name: Vigan.08G077700.01
Multiple alignment
Variant Information
Position: Chr08:6314981..6317687 (+ strand)
Length: 2707
Functional Information:
Description: Similar to Uncharacterized protein. [I1NGS7, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.41,0.03,0.43,0.00,6.63,0.13
Automatic updates:
Name: DQ822974 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB94 (MYB94) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: NM_001254391 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor LAF1-like (LOC100790724), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:6314981..6315177 (+ strand)
Length: 197
Type: five_prime_UTR
Position: Chr08:6315178..6315313 (+ strand)
Length: 136
Type: CDS
Position: Chr08:6316040..6316169 (+ strand)
Length: 130
Type: CDS
Position: Chr08:6316814..6317363 (+ strand)
Length: 550
Type: CDS
Position: Chr08:6317364..6317687 (+ strand)
Length: 324
Type: three_prime_UTR


>Vigan.08G077700.01
ATTAAGTAAT GGAAAAAGAA ATGCACAAGC ACGACTATTT CGTGGAATTT TTATATATAA GTCTGTTTGT GCACTGTTTC
CCTGTCAAAT ACTTTCCCTT CCTTCTCTTA GTCTTCTCTG CCACCTCTGT GAGTTCTGTT TTGGAGATTC CAATTCCAAG
CCTAACATTG AAGTGAAACT CTGTGAGGCA AGGCAAAATG GGGTGCCAGC CATTGGAAAA GGGAAAACCA AAACATAAGA
AGGGGTTATG GTCACCAGAA GAAGACAATA AACTCAGAAA CTACATCCTT AAACAAGGTC ATGGCTGTTG GAGTTCTGTT
CCCATTAAGG CAGGCTTGCA AAGAAGTGGA AAGAGTTGCA GACTAAGATG GATAAACTAT CTGAGACCAG GACTAAAGAG
AGGGAAGTTC ACCAAACAGG AAGAAGAGAC AATCCTCACC CTTCACCACA TGCTAGGCAA CAAGTGGTCA CAGATATCAC
AGCATTTGCC AGGAAGAACA GATAATGAGA TTAAAAACTA CTGGCATTCA TATTTGAAAA AGAAAGAGGC AAAAGCTAAG
GAAATGGATT CTCATAACCA AATAAAGTAT GCTAGCTCAA GCTCAGATAC CATGGAGTCT TCAAACTCTC TCAAAAACCT
TGCAACTCAA GGTACACAGA GTTGTAACTT CACCAAAGAG GCTAGCCAAA GCTCCTTGCC AAAACTGTTA TTTGCTGAGT
GGCTTTCATT GGATCAAGTA AACTCTGCAA ATTCAGTTGA CTCTTTTGGT TTGAGGAATG GATTTGATCA AAATTCAACT
CTTCAGGAGG CTGCAATCCA TGATATGTCA GATATACCCT TTGGTGGAGG GTACCATAGA TGCTTGGCTA ACATTTCAGC
CCCTGAGATT TTGAATTCAG AGCTGAAGTA TGCAAATCAG ATGGCGGAAA ATGGTTTCAT CCATTGTGTG CCTGGAGTTG
ACTTGATGAG TAGCAATTTC AGCATGAGCA ATGATGCGAT AATGTACATA TGAGAAGTAA GTTTCGGAGT TGGTCAACAA
AGAATAATAT CATTTTCTAA TTTTATACAT ACACAAAACA ATCAAACTTA AGCTATATAA AATAAAAGTT GCATTCCAAG
TTGTATGTTC TATTCTTCTA CCCACTTCCA ATTATTTCAA TGCGATACAG CTATGTAATT TCGTTTCAGT TTAAGAAGTC
AACTTCTGAT GGTCTTCGTT GTTTTTACAG AAAATCACAT TTGATTAAGT GCTATTTGGC TAATGTCTAC AGTTTTGGAC
ATGCATGTGA AAATTACTAC GAAATATCAC GCTAAGGTTA AAACGAAGTA ATTAAAT

>Vigan.08G077700.01
ATGGGGTGCC AGCCATTGGA AAAGGGAAAA CCAAAACATA AGAAGGGGTT ATGGTCACCA GAAGAAGACA ATAAACTCAG
AAACTACATC CTTAAACAAG GTCATGGCTG TTGGAGTTCT GTTCCCATTA AGGCAGGCTT GCAAAGAAGT GGAAAGAGTT
GCAGACTAAG ATGGATAAAC TATCTGAGAC CAGGACTAAA GAGAGGGAAG TTCACCAAAC AGGAAGAAGA GACAATCCTC
ACCCTTCACC ACATGCTAGG CAACAAGTGG TCACAGATAT CACAGCATTT GCCAGGAAGA ACAGATAATG AGATTAAAAA
CTACTGGCAT TCATATTTGA AAAAGAAAGA GGCAAAAGCT AAGGAAATGG ATTCTCATAA CCAAATAAAG TATGCTAGCT
CAAGCTCAGA TACCATGGAG TCTTCAAACT CTCTCAAAAA CCTTGCAACT CAAGGTACAC AGAGTTGTAA CTTCACCAAA
GAGGCTAGCC AAAGCTCCTT GCCAAAACTG TTATTTGCTG AGTGGCTTTC ATTGGATCAA GTAAACTCTG CAAATTCAGT
TGACTCTTTT GGTTTGAGGA ATGGATTTGA TCAAAATTCA ACTCTTCAGG AGGCTGCAAT CCATGATATG TCAGATATAC
CCTTTGGTGG AGGGTACCAT AGATGCTTGG CTAACATTTC AGCCCCTGAG ATTTTGAATT CAGAGCTGAA GTATGCAAAT
CAGATGGCGG AAAATGGTTT CATCCATTGT GTGCCTGGAG TTGACTTGAT GAGTAGCAAT TTCAGCATGA GCAATGATGC
GATAATGTAC ATATGA

>Vigan.08G077700.01
MGCQPLEKGK PKHKKGLWSP EEDNKLRNYI LKQGHGCWSS VPIKAGLQRS GKSCRLRWIN YLRPGLKRGK FTKQEEETIL
TLHHMLGNKW SQISQHLPGR TDNEIKNYWH SYLKKKEAKA KEMDSHNQIK YASSSSDTME SSNSLKNLAT QGTQSCNFTK
EASQSSLPKL LFAEWLSLDQ VNSANSVDSF GLRNGFDQNS TLQEAAIHDM SDIPFGGGYH RCLANISAPE ILNSELKYAN
QMAENGFIHC VPGVDLMSSN FSMSNDAIMY I*