GBrowse Details

Vigan.08G089300.01

Basic Information:
Name: Vigan.08G089300.01
Multiple alignment
Variant Information
Position: Chr08:7422256..7426217 (+ strand)
Length: 3962
Functional Information:
Description: Similar to Inositol monophosphatase family protein isoform 1. [XP_007019451.1, Theobroma cacao]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Molecular Function: fructose 1,6-bisphosphate 1-phosphatase activity (GO:0042132)
Molecular Function: phosphoric ester hydrolase activity (GO:0042578)
InterPro: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase (IPR000146)
Fructose-1,6-bisphosphatase, active site (IPR020548)
Fructose-1,6-bisphosphatase (IPR028343)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.46,0.04,5.80,144.62,0.00,2.19,0.07,4.03
Arabidopsis thaliana homolog: AT1G43670.1
Automatic updates:
Name: MK469994 NCBI(nuccore)
Organism: Vigna radiata var. radiata
Description: Vigna radiata var. radiata fructose-1,6-bisphosphatase mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: NM_001255239 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max fructose-1,6-bisphosphatase (LOC100815943), mRNA.
PubMed ID: 26314767 NCBI(pubmed)
Status: Known Variant
Name: NM_001255521 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max fructose-1,6-bisphosphatase, cytosolic-like (LOC100812684), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:7422256..7422496 (+ strand)
Length: 241
Type: five_prime_UTR
Position: Chr08:7422497..7422655 (+ strand)
Length: 159
Type: CDS
Position: Chr08:7422964..7423011 (+ strand)
Length: 48
Type: CDS
Position: Chr08:7423160..7423234 (+ strand)
Length: 75
Type: CDS
Position: Chr08:7423308..7423369 (+ strand)
Length: 62
Type: CDS
Position: Chr08:7423470..7423536 (+ strand)
Length: 67
Type: CDS
Position: Chr08:7423788..7423901 (+ strand)
Length: 114
Type: CDS
Position: Chr08:7424246..7424332 (+ strand)
Length: 87
Type: CDS
Position: Chr08:7424895..7424965 (+ strand)
Length: 71
Type: CDS
Position: Chr08:7425060..7425125 (+ strand)
Length: 66
Type: CDS
Position: Chr08:7425428..7425514 (+ strand)
Length: 87
Type: CDS
Position: Chr08:7425627..7425702 (+ strand)
Length: 76
Type: CDS
Position: Chr08:7425927..7426040 (+ strand)
Length: 114
Type: CDS
Position: Chr08:7426041..7426217 (+ strand)
Length: 177
Type: three_prime_UTR


>Vigan.08G089300.01
GTGGTATCTT GTCGTGTCGT GCATGACGAC GAAAATCGTT ATCCGCCGCC ATCACCACGA GCTCACCCTC TCCCTACGCC
TTCCACGTGT CACCCAAACT TCCTTTCCCC ACAGATAATA TCATCTCTTT CTCTTTCTCT ATATTGAAAC CAAAAACTCA
TATGTGATAT ACAATCATAC GTATGTAGTG TAAGAAGATC CTGTTGAAGT CATAACTTTG TGGGTTAGTG AAGAGTGAAA
GATGGATCAC AGTGCAGATG CTCAACGCAC AGACTTGATG ACCATAACCC GTTTCGTGCT CAACGAACAG TCGAAGCAAC
CTGAGGCTCG TGGCGATTTC ACAATCTTGC TCAGTCACAT TGTTCTTGGC TGCAAGTTCG TTTGTTCTGC TGTTAACAAG
GCGGGTCTTG CTAAGCTTAT TGGGCTTGCT GGAGAGACAA ATGTCCAGGG TGAGGAGCAA AAGAAACTGG ACGTCCTTTC
CAATGATGTC TTTGTCAAGG CTCTGGTCAG CAGTGGACGA ACATGCATCT TGGTGTCTGA AGAAGATGAG GAAGCAACAT
TTGTGGAGCC TTCTAAGCGT GGAAAGTACA TAGTTGTTTT TGATCCGCTG GATGGTTCCT CTAACATCGA TTGTGGTGTT
TCTATTGGCA CAATTTTTGG GATTTATTTG GTGAAAGAAA ACCGTGAACC AACCATAGAA GATGTTTTGC AACCAGGGAA
GAACATGTTG GCTGCTGGTT ATTGTATGTA TGGAAGCTCT TGCACGTTTG TGCTAAGCAC CGGAAGTGGT GTGAATGGTT
TCACCCTTGA TCCATCTCTT GGAGAGTTCA TTCTTACTCA CCCTGACATC AAGGTCCCGA AGAAAGGAAA GATATATTCA
GTGAATGAAG GAAATGCTAA AAATTGGGAT GGTCCTACTA CCAAGTATGT GGAAAACTGC AAGTTTCCAA AAGACGGTTC
ATCACCAAAG TCCTTAAGAT ATGTTGGAAG CATGGTAGCT GATGTTCACC GCACATTTCT TTATGGAGGT ATCTTTCTGT
ACCCGGCTGA TAAAAAGAGT CCAAATGGGA AACTTCGTGT TCTCTACGAA GTCTTCCCAA TGTCATTCTT GATGGAGCAG
GCAGGAGGGC AGGCTTTCAC TGGCAAGCAA AGGGCACTTG ATTTGGTTCC AACAAAGTTG CACGAGAGAT CTCCCATATT
CCTTGGTAGC TATGAGGATG TAGAGGAAAT CAAAGCCCTT TATGCTGCTG ATCAAAAATT GGAATGAAAG AAACCATAAT
TCTTTGTCTT TTTCAACTTA CAATCAAGTC TCATCTAATT GTTGCACAGA TACATGGTCA TGTATATGCC AAGAAGGCTT
GTTAATGTTT TTGTGATTTA CAAAAAGTAT TATATTACGT CATATCTAAA TACATTTTAA TTTAATATTT TCAATATATA
GCAA

>Vigan.08G089300.01
ATGGATCACA GTGCAGATGC TCAACGCACA GACTTGATGA CCATAACCCG TTTCGTGCTC AACGAACAGT CGAAGCAACC
TGAGGCTCGT GGCGATTTCA CAATCTTGCT CAGTCACATT GTTCTTGGCT GCAAGTTCGT TTGTTCTGCT GTTAACAAGG
CGGGTCTTGC TAAGCTTATT GGGCTTGCTG GAGAGACAAA TGTCCAGGGT GAGGAGCAAA AGAAACTGGA CGTCCTTTCC
AATGATGTCT TTGTCAAGGC TCTGGTCAGC AGTGGACGAA CATGCATCTT GGTGTCTGAA GAAGATGAGG AAGCAACATT
TGTGGAGCCT TCTAAGCGTG GAAAGTACAT AGTTGTTTTT GATCCGCTGG ATGGTTCCTC TAACATCGAT TGTGGTGTTT
CTATTGGCAC AATTTTTGGG ATTTATTTGG TGAAAGAAAA CCGTGAACCA ACCATAGAAG ATGTTTTGCA ACCAGGGAAG
AACATGTTGG CTGCTGGTTA TTGTATGTAT GGAAGCTCTT GCACGTTTGT GCTAAGCACC GGAAGTGGTG TGAATGGTTT
CACCCTTGAT CCATCTCTTG GAGAGTTCAT TCTTACTCAC CCTGACATCA AGGTCCCGAA GAAAGGAAAG ATATATTCAG
TGAATGAAGG AAATGCTAAA AATTGGGATG GTCCTACTAC CAAGTATGTG GAAAACTGCA AGTTTCCAAA AGACGGTTCA
TCACCAAAGT CCTTAAGATA TGTTGGAAGC ATGGTAGCTG ATGTTCACCG CACATTTCTT TATGGAGGTA TCTTTCTGTA
CCCGGCTGAT AAAAAGAGTC CAAATGGGAA ACTTCGTGTT CTCTACGAAG TCTTCCCAAT GTCATTCTTG ATGGAGCAGG
CAGGAGGGCA GGCTTTCACT GGCAAGCAAA GGGCACTTGA TTTGGTTCCA ACAAAGTTGC ACGAGAGATC TCCCATATTC
CTTGGTAGCT ATGAGGATGT AGAGGAAATC AAAGCCCTTT ATGCTGCTGA TCAAAAATTG GAATGA

>Vigan.08G089300.01
MDHSADAQRT DLMTITRFVL NEQSKQPEAR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNVQG EEQKKLDVLS
NDVFVKALVS SGRTCILVSE EDEEATFVEP SKRGKYIVVF DPLDGSSNID CGVSIGTIFG IYLVKENREP TIEDVLQPGK
NMLAAGYCMY GSSCTFVLST GSGVNGFTLD PSLGEFILTH PDIKVPKKGK IYSVNEGNAK NWDGPTTKYV ENCKFPKDGS
SPKSLRYVGS MVADVHRTFL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT GKQRALDLVP TKLHERSPIF
LGSYEDVEEI KALYAADQKL E*