GBrowse Details

Vigan.08G093900.01

Basic Information:
Name: Vigan.08G093900.01
Multiple alignment
Variant Information
Position: Chr08:7842014..7849061 (- strand)
Length: 7048
Functional Information:
Description: Similar to Low affinity potassium transport system protein kup isoform 1. [XP_007019590.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:16.55,11.91,11.54,13.71,5.44,15.94,11.30,14.71
Arabidopsis thaliana homolog: AT1G22790.1
Automatic updates:
Name: BT092279 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-10F3 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001369299 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527436 (LOC100527436), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:7842014..7842654 (- strand)
Length: 641
Type: three_prime_UTR
Position: Chr08:7842655..7842724 (- strand)
Length: 70
Type: CDS
Position: Chr08:7847429..7847982 (- strand)
Length: 554
Type: CDS
Position: Chr08:7847983..7849061 (- strand)
Length: 1079
Type: five_prime_UTR


>Vigan.08G093900.01
TTGCGCACAT TAAAGAATAG GGTCACGTCG CTATCATGCG CCGTGTGGGT CACTGTCCTA TTCTCCTTTT AAATAATTGA
AACCAGAAGA AAAATATACA TAATCGGATT TTTTTCCTTC TTATTCATCG TTCAATTCAA TCACTCGCCG AGTTTTCGTC
CGGATGCTCC GAATCGTTGC TGTCCATCCA CGCGCCGGCG ACCTTCCGTT CTGATTCTCG GTACTGTAAA CTCGTTCCTT
CTTCTTCGAT CTAGGATTTG CAGTTTGTTT CTCGGAGAAG TGTTGGAAAA CCGACACTTC GAAATCTCGC TCTGCGTTGT
TCGATTTGAG TGTGATTTCA GCGTGCTCGG GGCTCGGTGT TTCTGATTTT CTTTCTCATG CATTTTCAAG TAACTCAGAA
GCTTTCTTTT CTTTTATCTT ACCTTTTTTT GGATTTAGCA ATTTAATTTG GTTTCTTGGA TTTTTTTTAT TGTGTTCGAG
AAATTGCGCA CTAACGTATT TTCGGAGTGG TTGCATTGAA GTAGAGATCT TTCTGTCTCG GTAGTGAATC GACGGAAATT
GTTTATTTAT GTGTGTATCA TATGCATGTT CAGTAGGATG GTAAGAAAAT ATACACGACG GATTATATAA GATGCCTGGG
AGTATTGATA AAGCGAGTTG TGTGGATTTC GAGCTTTCTT TTGTCCAAAT ATTTTGATGA TTTTGGCTAA AATCGTATCT
CAAAGTGTGG CAATTTTAGC TGCGTGGATT TATTATGTGT TTACTTTGAA CAACAGATTC AGCACGTTTT GAGCATCTGG
AAACTTGAAG ATGCCTCGAA ATGGTTCTAG TTCTGTGAGA TTGTGCTTTT GTTAACTCTC ATGGCTTTTC AAATCCGTGT
TTTTGCTATG AAATGTGCTT TTCTAACAGT TGAAAGAGTT AGTGGAATGA AAAGTATTGT TAAGAATGTT AAAAATTTTA
TAACTGAAGG AAATCATTCT GATCTCTGGT TACTTTTGGT TGATAAGGCT GTTAGGTTCT TCAGAGAGAA GGGAGCCTCA
CATAGAAATC ATTTTATGGT GCACCGATGA GAAGAACTGA TGTTATTGGC AGTAGAAGGA GGAGGATTCT TCTCTGCTTC
GGCTTCAGGG TATACTAAGG GCCTGAGCCT TCTCCTCTTG GGTCAGAGGG ATGAGGATAA ACCCATGAGA GTAGCTCCGT
GGAACCAGTA CCAGTTGGTA GACCAAGAAA CTGACCGCGA GCTCCAGCTG GCTTCTACAA AGAATCGCCT CACCCGCGGC
TGTGCCTCCT TTGTTTGCTT TGGTCGCACT TCCGCAGGTC TTGATACTCC GTCTCCTCTT AAAGTGGGCC CTGCCCAGCA
GCATGAAGTC TCTCCAGGAC CTTTGGTTTC CAACAAGGGA AATGATCCTT CCGCACCACT CGATGATGGA AATGATAATA
GAAAGCTTAC ACTTAAAAGT AGCATAAAGA AGCCGCAAAT TGTTAAACCC GTTCATGTTG AGGCTGCTAG TGAGCAGGAA
GCAGCAGGTG GACAGGGGAT TTGTGCTCCT GGTGGTCAAG CAGAAAGAAG GAAAGTGCAG TGGACTGATA ACTGTGGTAG
CGAGCTTGTT GAAATTCGAG AATTTGAGCC CAGTGAAGTG GATGGATCGG ATGATGAATT TGATAGTGGA AACGACAGAA
CTTGTTCATG TACGATTATG TAAATTGGAG TTTCATTAAG TTGATAGGTT CGTCGGGGTC ATTCACTGTA CACAACCCAT
CACTCGGTTT TTCAGTTTCC GTGGAGATAT GTTCAACCAA CACCTTGCCT AAGTGATGTG TTTGTCATTG CTCGCTGCGG
CTTTAAATTT TGTTCCTCTG CTCAGCATCA ATTTGTATCA TTCTTGTATG TGTGAATTCT TTGCCTTTGA TTCATCATTT
TTATGCTACT TTATGTTCTT ATTTTTATAT GGATTAACCA AGTTTTCTTT CTATGCTCTG GCGTTTTCTG GAAGAAAGAT
AATATACAAA TGTAAGATTT TGTAAAAAAG AGTGGAGCAA CTTGGTAACA AACTTACGAT GAGACGGGGA TTGTTAAGGT
ATATTATCTG TTGAGAGGAT AAAGAAAAGT TAATACTGTT GCAATTGCTT TGTTGTTGAA GATTGATCGG GATTTTGATA
GGGATAAAAT TAGTTTTGGT CCATCATGCC TATAAGATGA AGCAGTTTTC TTGCATTCGG GCTCGGATTT GAAATACCAT
TTGTGTCCTA TTTTTCTTTA CCTGCTGTGT GACTTAAAGT ACTCCTGCAG CTCCAATTTC ACTATATCTA ATCAATTAGT
TTGATTTCAT TTTGTTGTCA TAAT

>Vigan.08G093900.01
ATGTTATTGG CAGTAGAAGG AGGAGGATTC TTCTCTGCTT CGGCTTCAGG GTATACTAAG GGCCTGAGCC TTCTCCTCTT
GGGTCAGAGG GATGAGGATA AACCCATGAG AGTAGCTCCG TGGAACCAGT ACCAGTTGGT AGACCAAGAA ACTGACCGCG
AGCTCCAGCT GGCTTCTACA AAGAATCGCC TCACCCGCGG CTGTGCCTCC TTTGTTTGCT TTGGTCGCAC TTCCGCAGGT
CTTGATACTC CGTCTCCTCT TAAAGTGGGC CCTGCCCAGC AGCATGAAGT CTCTCCAGGA CCTTTGGTTT CCAACAAGGG
AAATGATCCT TCCGCACCAC TCGATGATGG AAATGATAAT AGAAAGCTTA CACTTAAAAG TAGCATAAAG AAGCCGCAAA
TTGTTAAACC CGTTCATGTT GAGGCTGCTA GTGAGCAGGA AGCAGCAGGT GGACAGGGGA TTTGTGCTCC TGGTGGTCAA
GCAGAAAGAA GGAAAGTGCA GTGGACTGAT AACTGTGGTA GCGAGCTTGT TGAAATTCGA GAATTTGAGC CCAGTGAAGT
GGATGGATCG GATGATGAAT TTGATAGTGG AAACGACAGA ACTTGTTCAT GTACGATTAT GTAA

>Vigan.08G093900.01
MLLAVEGGGF FSASASGYTK GLSLLLLGQR DEDKPMRVAP WNQYQLVDQE TDRELQLAST KNRLTRGCAS FVCFGRTSAG
LDTPSPLKVG PAQQHEVSPG PLVSNKGNDP SAPLDDGNDN RKLTLKSSIK KPQIVKPVHV EAASEQEAAG GQGICAPGGQ
AERRKVQWTD NCGSELVEIR EFEPSEVDGS DDEFDSGNDR TCSCTIM*