GBrowse Details

Vigan.08G094600.01

Basic Information:
Name: Vigan.08G094600.01
Multiple alignment
Variant Information
Position: Chr08:7939648..7943747 (+ strand)
Length: 4100
Functional Information:
Description: Similar to Uncharacterized protein. [Q42810, Glycine max]
GO: Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase-like domain (IPR011009)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:234.59,49.77,17.80,25.89,2.31,8.19,61.04,13.50
Automatic updates:
Name: NM_001248411 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max choline kinase (LOC547866), mRNA.
PubMed ID: 8934624 NCBI(pubmed)
Status: Known Variant
Name: NM_001255050 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ethanolamine kinase 2-like (LOC100799515), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001415715 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ethanolamine kinase 2-like (LOC100799515), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001415716 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ethanolamine kinase 2-like (LOC100799515), transcript variant 3, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:7939648..7939706 (+ strand)
Length: 59
Type: five_prime_UTR
Position: Chr08:7939707..7940060 (+ strand)
Length: 354
Type: CDS
Position: Chr08:7941785..7941906 (+ strand)
Length: 122
Type: CDS
Position: Chr08:7941990..7942185 (+ strand)
Length: 196
Type: CDS
Position: Chr08:7942388..7942505 (+ strand)
Length: 118
Type: CDS
Position: Chr08:7942616..7942663 (+ strand)
Length: 48
Type: CDS
Position: Chr08:7942963..7943063 (+ strand)
Length: 101
Type: CDS
Position: Chr08:7943194..7943343 (+ strand)
Length: 150
Type: CDS
Position: Chr08:7943344..7943747 (+ strand)
Length: 404
Type: three_prime_UTR


>Vigan.08G094600.01
GAAAGCACTT AACCAAAATC TGTTTCAGCT TCCTCTGTTT TGGGTTCTGT TTTTCGACGA TGGCCATCAA GACAATTGAA
CTGTTGAAAG GATGCGGATC GCAGGAAGAG ATAATGGAAG TGCTTGCTGC GGTGGCGTCG GATATGGGTG ATGTGATCGA
TGATGTGAGC AGCTTGCAGG TGATTCCACT GAAGGGTGCA ATGACCAATG AGGTTTTCCA GGTAAAATGG CCTTCTAAAA
ATGGTGGTGA AGTCAGAAAG GTTCTGGTTC GTTTATATGG GGAAGGTGTT GAAGTTTTCT TCGACAGGGA AGAAGAAGTG
AAAACCTTTG AGTGCATTTC AAAGCATGGT CAAGGACCTC GCCTTCTTGG TCGTTTCACT TCTGGTAGAG TTGAGGAGTT
TATTCATGCC AGAACTCTCT CAGCTGCTGA CCTGCGTGAC CCTGAAGTAT CTGCTTTGGT AGCATCTAAG ATGAGAGAGT
TCCATAATCT TCACATGCCT GGTGCTAAGA AGGCTCAAAT TTGGCAAAGA TTGAGGAATT GGCTTGGCCA AGCCAAGAGT
CTGTGCTCTC CAAAGGATGC AAAAAATTTT GGCTTGGACA ATCTGGATGA GGAAATAAAC ATACTGGAGA AGAAGTTATC
TGAAGGATAT CAAGAGATTG GCTTCTGTCA CAATGATCTA CAGTATGGTA ACATAATGAT GGAGGAGGAG ACAAGATTAA
TCACTATAAT TGACTATGAA TATGCAAGTT ATAATCCTAT TGCTTATGAC ATAGCAAATC ATTTTTGCGA AATGGTAGCT
GATTACCACA GTGACACACC TCATGTTCTT GACTTCAAGA AATATCCAGG ACTAGAGGAA CGTCAAAGAT TTATCCGCAT
CTATCTGAGT TCTGAAGGCA ATAGACCAAG CAATGCTAAA GTGAACCAGT TAGTGAAAGC AACTGAAAAC TACACTGCAG
CAAACCATAT ATTTTGGGGT TTGTGGGGAC TCATTTCGAG TTATGTGAAT AAAATAGACT TTGACTATAA GGAGTATGCA
AGGCAGAGGT TTCAGCAATA CTGGTTAAGG AAGGCTAATT TATTGGACTC GCCAAGCATC GTTTCCCAAG ACCAAACTCT
GAATGAATCT CTACCATCTT TCACGTGATT TTGCTTCAGT TGCTTACTGA AGTTTAGTCT TAGTATTATA CTATATAGTA
TAGTATATAT ATGAATAACA CCTAAGATAT ATGACATGCA CCATCTATAT GTAAATTTAT TTAATCAGCA TGAATGTGTA
ATTTTTATGA ATCCGTCACT TTTGGAGTGA GTTGAGAGAT ATGCAGTCTA TGTATTGTTT GCAATAATGA TGGCATATGC
ATATATACAG AACAGATGGA TTTGTCTTCT CATCTTTACA CATTAACTGA GGTTATTATG ATCTGAAATT AGTCACTCTG
ACATGGAATA TTTATACATG TCTCTTGCAT ATTCTTGAAA TCTATTTTCA ATAGTTCCTC TCATCTAATA TGCTTACCAT
CCTCTCCTCC TTATCTTCAA ACTGTAATCC AT

>Vigan.08G094600.01
ATGGCCATCA AGACAATTGA ACTGTTGAAA GGATGCGGAT CGCAGGAAGA GATAATGGAA GTGCTTGCTG CGGTGGCGTC
GGATATGGGT GATGTGATCG ATGATGTGAG CAGCTTGCAG GTGATTCCAC TGAAGGGTGC AATGACCAAT GAGGTTTTCC
AGGTAAAATG GCCTTCTAAA AATGGTGGTG AAGTCAGAAA GGTTCTGGTT CGTTTATATG GGGAAGGTGT TGAAGTTTTC
TTCGACAGGG AAGAAGAAGT GAAAACCTTT GAGTGCATTT CAAAGCATGG TCAAGGACCT CGCCTTCTTG GTCGTTTCAC
TTCTGGTAGA GTTGAGGAGT TTATTCATGC CAGAACTCTC TCAGCTGCTG ACCTGCGTGA CCCTGAAGTA TCTGCTTTGG
TAGCATCTAA GATGAGAGAG TTCCATAATC TTCACATGCC TGGTGCTAAG AAGGCTCAAA TTTGGCAAAG ATTGAGGAAT
TGGCTTGGCC AAGCCAAGAG TCTGTGCTCT CCAAAGGATG CAAAAAATTT TGGCTTGGAC AATCTGGATG AGGAAATAAA
CATACTGGAG AAGAAGTTAT CTGAAGGATA TCAAGAGATT GGCTTCTGTC ACAATGATCT ACAGTATGGT AACATAATGA
TGGAGGAGGA GACAAGATTA ATCACTATAA TTGACTATGA ATATGCAAGT TATAATCCTA TTGCTTATGA CATAGCAAAT
CATTTTTGCG AAATGGTAGC TGATTACCAC AGTGACACAC CTCATGTTCT TGACTTCAAG AAATATCCAG GACTAGAGGA
ACGTCAAAGA TTTATCCGCA TCTATCTGAG TTCTGAAGGC AATAGACCAA GCAATGCTAA AGTGAACCAG TTAGTGAAAG
CAACTGAAAA CTACACTGCA GCAAACCATA TATTTTGGGG TTTGTGGGGA CTCATTTCGA GTTATGTGAA TAAAATAGAC
TTTGACTATA AGGAGTATGC AAGGCAGAGG TTTCAGCAAT ACTGGTTAAG GAAGGCTAAT TTATTGGACT CGCCAAGCAT
CGTTTCCCAA GACCAAACTC TGAATGAATC TCTACCATCT TTCACGTGA

>Vigan.08G094600.01
MAIKTIELLK GCGSQEEIME VLAAVASDMG DVIDDVSSLQ VIPLKGAMTN EVFQVKWPSK NGGEVRKVLV RLYGEGVEVF
FDREEEVKTF ECISKHGQGP RLLGRFTSGR VEEFIHARTL SAADLRDPEV SALVASKMRE FHNLHMPGAK KAQIWQRLRN
WLGQAKSLCS PKDAKNFGLD NLDEEINILE KKLSEGYQEI GFCHNDLQYG NIMMEEETRL ITIIDYEYAS YNPIAYDIAN
HFCEMVADYH SDTPHVLDFK KYPGLEERQR FIRIYLSSEG NRPSNAKVNQ LVKATENYTA ANHIFWGLWG LISSYVNKID
FDYKEYARQR FQQYWLRKAN LLDSPSIVSQ DQTLNESLPS FT*