GBrowse Details

Vigan.08G097900.01

Basic Information:
Name: Vigan.08G097900.01
Multiple alignment
Variant Information
Position: Chr08:8216141..8223195 (+ strand)
Length: 7055
Functional Information:
Description: Similar to Uncharacterized protein. [I1NH81, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: protein binding (GO:0005515)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Leucine-rich repeat (IPR001611)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Leucine-rich repeat-containing N-terminal, type 2 (IPR013210)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Leucine rich repeat 4 (IPR025875)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.26,3.57,8.65,3.75,7.79,32.02,14.93,15.02
Arabidopsis thaliana homolog: AT1G34210.1, AT1G60800.1, AT1G71830.1, AT2G13790.1, AT2G13800.1, AT2G23950.1, AT3G25560.3, AT4G30520.1, AT4G33430.2, AT5G10290.1, AT5G16000.1, AT5G65240.2
Automatic updates:
Name: MN076320 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max BAK3 (BAK3) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001251345 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max somatic embryogenesis receptor kinase (SERK1), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:8216141..8216698 (+ strand)
Length: 558
Type: five_prime_UTR
Position: Chr08:8216699..8216783 (+ strand)
Length: 85
Type: CDS
Position: Chr08:8218185..8218317 (+ strand)
Length: 133
Type: CDS
Position: Chr08:8218438..8218509 (+ strand)
Length: 72
Type: CDS
Position: Chr08:8219159..8219302 (+ strand)
Length: 144
Type: CDS
Position: Chr08:8219459..8219530 (+ strand)
Length: 72
Type: CDS
Position: Chr08:8219618..8219689 (+ strand)
Length: 72
Type: CDS
Position: Chr08:8219767..8219879 (+ strand)
Length: 113
Type: CDS
Position: Chr08:8220321..8220452 (+ strand)
Length: 132
Type: CDS
Position: Chr08:8220536..8220877 (+ strand)
Length: 342
Type: CDS
Position: Chr08:8221629..8222023 (+ strand)
Length: 395
Type: CDS
Position: Chr08:8222512..8222826 (+ strand)
Length: 315
Type: CDS
Position: Chr08:8222827..8223195 (+ strand)
Length: 369
Type: three_prime_UTR


>Vigan.08G097900.01
CCATGTTAGA GTCACGTCAC TTTCCACGAT CTCGCGCGAG AGCGTTTTTG ACTGCGTTAG GGCAGGGGGC AGCACCGTTC
GGGCAGCTTC ATTTTTCTTT TTCTATCCAT CTATTTTACA CTCTCACTCC ACGCCTCACT CAAAAAAGAT AACAATCTTA
CACTCTCACC AGCTGACAGA GATAGAGAGA GAAAGAGAAA CAGTATCTGT GTTTTCCTTT CCAAGATAGC TAGAGCGAAA
GTGAAAAAAA AAAGTTTTTT ATTTTTTCAT ATACTCGAAG AGAAGGGAAA ATGTTTTGAT TCTTTTAGTT TTTCAGAGCT
TGTTTTGTGT TTCTGGGTTT GAGTCTCTGG AGTTGTCGAA AATTGGCGTA TTTTGGTGAG ATCGGGGTGT GGGTGTAGTG
TGGCTGGTGG TAATGGCGGA GATTTGAGAG TTAGGGTTTG AGTTCATTTG AGTTTGTATT TATAGTGGTG GTGGCGGAAG
AGTGCTGGGG TGTTTTTGTG ATGGTGTATT GGTGTGGGAG GTCTTGTTTG GATCTGAAGT TATTGAGTAC ATAGGTTGAT
GGAGAGAAAG TTGATGGATT TGAGTTTCAT TTGTTGGATA TTGTTGATTC ATCCACTATG CCTGATTTCT GCTAACACGG
AAGGAGATGC TTTGCATAGT CTGAGGACTA ATTTACAGGA CCCTAACAAT GTTTTGCAAA GTTGGGATCC TACACTAGTC
AATCCATGTA CATGGTTTCA TGTGACATGC AACAATGATA ATAGTGTTAT CAGAGTTGAT CTGGGGAATG CTGCTTTGTC
TGGTCAACTT GTTCCACAGC TTGGTCAGCT CAAGAATTTG CAGTATTTGG AACTTTACAG CAATAACATT ACTGGCCCTA
TCCCAAGTGA CCTGGGGAAT CTTACTAACC TGGTGAGCTT GGATCTGTAC CTAAACCGTT TCACTGGCCC AATCCCAGAT
TCATTGGGCA AGTTGTCAAA ATTGCGTTTC CTCCGGCTTA ACAACAACAG CTTGTCAGGT CCTATTCCCA TGTCGCTGAC
TAATATTACT GCTCTCCAAG TTCTGGATTT GTCTAATAAT CATCTATCGG GAGTGGTTCC CGATAATGGC TCCTTCTCAT
TATTCACTCC TATCAGTTTT GCAAATAACT TGGATCTATG TGGACCCGTT ACTGGGCACC CCTGTCCTGG CTCTCCTCCA
TTTTCTCCTC CTCCTCCTTT TGTTCCTCCA CCTCCAATTT CTGCCCCAGG AGGTAATAGT GCCACTGGAG CAATAGCTGG
AGGAGTTGCT GCTGGTGCTG CTCTATTGTT TGCTGCACCT GCAATTGCAT TTGCCTGGTG GCGTAGAAGG AAACCACAAG
AATTTTTCTT TGATGTGCCT GCTGAAGAGG ATCCTGAAGT TCATCTAGGA CAGCTTAAAA GGTTCTCTCT ACGAGAACTG
CAAGTTGCAA CAGATACTTT CAGCAATAAG AACATTCTCG GGAGGGGAGG ATTTGGTAAG GTGTACAAAG GACGGTTGGC
TGATGGTTCA TTAGTGGCTG TGAAACGGTT GAAAGAGGAA CGCACACCTG GTGGGGAGCT TCAGTTTCAG ACCGAAGTAG
AGATGATTAG CATGGCTGTG CATAGAAATC TCCTTCGACT ACGTGGGTTT TGTATGACAC CAACAGAAAG GCTACTTGTT
TATCCCTACA TGGCTAACGG AAGTGTTGCC TCATGCTTAA GAGAGCGTCC TCCACATCAA GAACCCCTGG ATTGGCCAAC
TAGGAAAAGA ATAGCTTTGG GATCTGCAAG GGGTCTTTCA TATTTGCATG ATCACTGTGA TCCAAAGATT ATTCATCGCG
ATGTGAAAGC TGCAAACATA TTGCTGGATG AAGAGTTTGA GGCTGTTGTA GGGGACTTTG GATTGGCCAA ACTCATGGAT
TACAAGGACA CCCATGTGAC AACTGCTGTA AGGGGCACAA TTGGGCACAT AGCTCCTGAG TACCTATCCA CTGGTAAATC
TTCAGAGAAA ACCGATGTTT TTGGTTATGG TATCATGCTT CTGGAGCTGA TCACTGGACA GAGAGCTTTT GACCTTGCTC
GGCTTGCAAA TGACGACGAT GTTATGCTGC TTGATTGGGT AAAAGGACTC CTGAAGGAGA AAAAGCTTGA AATGTTGGTT
GATCCTGATC TACAAAACAA TTACATAGAA GCTGAGGTAG AACAATTAAT CCAGGTTGCA CTGCTCTGCA CACAAGGTTC
CCCTATGGAC CGACCAAAGA TGTCAGAAGT GGTGAGAATG CTTGAAGGTG ATGGGTTGGC AGAGAGATGG GATGAGTGGC
AAAAGGTGGA AGTTCTCCGG CAGGAGGTGG AGCTGGCCCC TCATCCCAAT TCTGATTGGA TTGTCGACTC GACTGAAAAT
CTGCATGCAG TTGAGTTATC TGGTCCAAGG TGACCTTGGC ACAGTAGTAA ATTAAGAAGA AAAAAAAAGA AAAGAATGGA
TTTATTTATG ACTTGTTTTT TAGCTATAAG TTTTCTTTCC ATTTTCCTTT TTGGTTCCTT CAAGTTCCAT ATCCTCTTGA
TTAATCTCAT GTAAGTCCGC TGCATTATAT TCATTTACAT TTGTGCATAG GGGTCGCTTT GTCAAGTTGC AATTTGTATC
ATCTGCTGTA TTTGATGAAG TGATTTTTAC TTAGATGAAA CAATGGCCAC TTAATCTTTT TGTACACCCT TCTTTCATAT
TCCTTCAATC TATATAGCTT ATATACCCTA TCTCATCTCA TCCATGTTTT GAATGATTGT ACTAGTAGCC CTAAAAGCCC
CG

>Vigan.08G097900.01
ATGGAGAGAA AGTTGATGGA TTTGAGTTTC ATTTGTTGGA TATTGTTGAT TCATCCACTA TGCCTGATTT CTGCTAACAC
GGAAGGAGAT GCTTTGCATA GTCTGAGGAC TAATTTACAG GACCCTAACA ATGTTTTGCA AAGTTGGGAT CCTACACTAG
TCAATCCATG TACATGGTTT CATGTGACAT GCAACAATGA TAATAGTGTT ATCAGAGTTG ATCTGGGGAA TGCTGCTTTG
TCTGGTCAAC TTGTTCCACA GCTTGGTCAG CTCAAGAATT TGCAGTATTT GGAACTTTAC AGCAATAACA TTACTGGCCC
TATCCCAAGT GACCTGGGGA ATCTTACTAA CCTGGTGAGC TTGGATCTGT ACCTAAACCG TTTCACTGGC CCAATCCCAG
ATTCATTGGG CAAGTTGTCA AAATTGCGTT TCCTCCGGCT TAACAACAAC AGCTTGTCAG GTCCTATTCC CATGTCGCTG
ACTAATATTA CTGCTCTCCA AGTTCTGGAT TTGTCTAATA ATCATCTATC GGGAGTGGTT CCCGATAATG GCTCCTTCTC
ATTATTCACT CCTATCAGTT TTGCAAATAA CTTGGATCTA TGTGGACCCG TTACTGGGCA CCCCTGTCCT GGCTCTCCTC
CATTTTCTCC TCCTCCTCCT TTTGTTCCTC CACCTCCAAT TTCTGCCCCA GGAGGTAATA GTGCCACTGG AGCAATAGCT
GGAGGAGTTG CTGCTGGTGC TGCTCTATTG TTTGCTGCAC CTGCAATTGC ATTTGCCTGG TGGCGTAGAA GGAAACCACA
AGAATTTTTC TTTGATGTGC CTGCTGAAGA GGATCCTGAA GTTCATCTAG GACAGCTTAA AAGGTTCTCT CTACGAGAAC
TGCAAGTTGC AACAGATACT TTCAGCAATA AGAACATTCT CGGGAGGGGA GGATTTGGTA AGGTGTACAA AGGACGGTTG
GCTGATGGTT CATTAGTGGC TGTGAAACGG TTGAAAGAGG AACGCACACC TGGTGGGGAG CTTCAGTTTC AGACCGAAGT
AGAGATGATT AGCATGGCTG TGCATAGAAA TCTCCTTCGA CTACGTGGGT TTTGTATGAC ACCAACAGAA AGGCTACTTG
TTTATCCCTA CATGGCTAAC GGAAGTGTTG CCTCATGCTT AAGAGAGCGT CCTCCACATC AAGAACCCCT GGATTGGCCA
ACTAGGAAAA GAATAGCTTT GGGATCTGCA AGGGGTCTTT CATATTTGCA TGATCACTGT GATCCAAAGA TTATTCATCG
CGATGTGAAA GCTGCAAACA TATTGCTGGA TGAAGAGTTT GAGGCTGTTG TAGGGGACTT TGGATTGGCC AAACTCATGG
ATTACAAGGA CACCCATGTG ACAACTGCTG TAAGGGGCAC AATTGGGCAC ATAGCTCCTG AGTACCTATC CACTGGTAAA
TCTTCAGAGA AAACCGATGT TTTTGGTTAT GGTATCATGC TTCTGGAGCT GATCACTGGA CAGAGAGCTT TTGACCTTGC
TCGGCTTGCA AATGACGACG ATGTTATGCT GCTTGATTGG GTAAAAGGAC TCCTGAAGGA GAAAAAGCTT GAAATGTTGG
TTGATCCTGA TCTACAAAAC AATTACATAG AAGCTGAGGT AGAACAATTA ATCCAGGTTG CACTGCTCTG CACACAAGGT
TCCCCTATGG ACCGACCAAA GATGTCAGAA GTGGTGAGAA TGCTTGAAGG TGATGGGTTG GCAGAGAGAT GGGATGAGTG
GCAAAAGGTG GAAGTTCTCC GGCAGGAGGT GGAGCTGGCC CCTCATCCCA ATTCTGATTG GATTGTCGAC TCGACTGAAA
ATCTGCATGC AGTTGAGTTA TCTGGTCCAA GGTGA

>Vigan.08G097900.01
MERKLMDLSF ICWILLIHPL CLISANTEGD ALHSLRTNLQ DPNNVLQSWD PTLVNPCTWF HVTCNNDNSV IRVDLGNAAL
SGQLVPQLGQ LKNLQYLELY SNNITGPIPS DLGNLTNLVS LDLYLNRFTG PIPDSLGKLS KLRFLRLNNN SLSGPIPMSL
TNITALQVLD LSNNHLSGVV PDNGSFSLFT PISFANNLDL CGPVTGHPCP GSPPFSPPPP FVPPPPISAP GGNSATGAIA
GGVAAGAALL FAAPAIAFAW WRRRKPQEFF FDVPAEEDPE VHLGQLKRFS LRELQVATDT FSNKNILGRG GFGKVYKGRL
ADGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR LRGFCMTPTE RLLVYPYMAN GSVASCLRER PPHQEPLDWP
TRKRIALGSA RGLSYLHDHC DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK
SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLQN NYIEAEVEQL IQVALLCTQG
SPMDRPKMSE VVRMLEGDGL AERWDEWQKV EVLRQEVELA PHPNSDWIVD STENLHAVEL SGPR*