GBrowse Details

Vigan.08G098700.01

Basic Information:
Name: Vigan.08G098700.01
Multiple alignment
Variant Information
Position: Chr08:8295947..8297295 (+ strand)
Length: 1349
Functional Information:
Description: Similar to cDNA clone:002-135-G05, full insert sequence. [Q9AX20, Oryza sativa subsp. japonica]
InterPro: Protein of unknown function DUF1264 (IPR010686)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:600.32,455.48,0.24,0.36,0.06,461.34,0.07,0.28
Arabidopsis thaliana homolog: AT5G45690.1
Automatic updates:
Name: NM_001250650 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305847 (LOC100305847), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:8295947..8296184 (+ strand)
Length: 238
Type: five_prime_UTR
Position: Chr08:8296185..8296467 (+ strand)
Length: 283
Type: CDS
Position: Chr08:8296554..8296636 (+ strand)
Length: 83
Type: CDS
Position: Chr08:8296737..8296851 (+ strand)
Length: 115
Type: CDS
Position: Chr08:8296923..8297179 (+ strand)
Length: 257
Type: CDS
Position: Chr08:8297180..8297295 (+ strand)
Length: 116
Type: three_prime_UTR


>Vigan.08G098700.01
TAATCATCGC AGCAGGTCTA CGTGAAACCA AAACCTCTAC TATCAGCCAC GCATTCATCG CTGCATGTGC ATGTGGAACC
AAAACCTCTA CAATCAGCCA CGTTACGATC GCTGCATGTC CGCGTGGAAC CAAAGCCTCA ACCGACGATT CTCCATCTTC
GGCTTATATA TACGGGTCAC GAGGGTATGA TATTCCACAC GCTCTAGAGA GGAGACTGAG TTAAACTTGC AATAGTTAAT
GGCTTCCACG GACAAGTCAT CGGAACCAAC TCCGGCGAAG GGTCCGGAAC CAACTCCGGG AAAGGCGATG GGAATGGGAC
AGCACATAAT CGACAAGGGT GCAATGATGA TACAGTCACT GGAACCCATA AAGCAGATTA GTCACCACGC GTGTTCCTTC
GCCATCTATA GCCACGACAT GTCTCGCCAG ATAGAAACTC ACCACTACTG CTCCAGACTC CACCAAAATT TCATGCAATG
CGCCGTCTAC GATTCCGATG AATCCGATGC TCGTCTTCTT GGTGTGGAGT ATATTGTTTC TGATGATATC TTTGAAACTA
TGCCACCGGA GGAACAGAAA CTTTGGCATT CTCATGCTTA TGAGGTCAAA TCGGGTCTCT GGGTGAACCC CAGAGTTCCA
GAGCTTATTG GGAAACCGGA GCTCGAAAAC CTAGCCAAAA CTTACGGCAA ATTCTGGTGT ACGTGGCAGG CTGACAGAGG
GGACAGGCTT CCTATGGGTG CACCTGCGCT GATGATGTCT CCACAAGCAG TAAGTCCTGG TTTGGTGAGG GGAGAGTTGG
TGCATGAGAG GGATGCCAAG TACAGTATTT CCTCAAAGAG CCTGAAAAGC TCAAGGGTGG AGATTCCTGA ACCAGAGATG
ATCAATCCCT TGGCTGACTA CTGGAAGCAG CATGGCAAAG GATTTGCCAT TGACATCGAC GAGACTCAGA TCAAGTTAAG
GGCACCTTTT CCTTGATTCA CTCAATATCC CAACTCTTTC TCTCATTTTC TTAGCTAATA AATGGATTGT ATCTAAAGCT
TAATGACATA AGCTGTTTTT AAGGATAAAT TATAATTTAT TATAACCATT TC

>Vigan.08G098700.01
ATGGCTTCCA CGGACAAGTC ATCGGAACCA ACTCCGGCGA AGGGTCCGGA ACCAACTCCG GGAAAGGCGA TGGGAATGGG
ACAGCACATA ATCGACAAGG GTGCAATGAT GATACAGTCA CTGGAACCCA TAAAGCAGAT TAGTCACCAC GCGTGTTCCT
TCGCCATCTA TAGCCACGAC ATGTCTCGCC AGATAGAAAC TCACCACTAC TGCTCCAGAC TCCACCAAAA TTTCATGCAA
TGCGCCGTCT ACGATTCCGA TGAATCCGAT GCTCGTCTTC TTGGTGTGGA GTATATTGTT TCTGATGATA TCTTTGAAAC
TATGCCACCG GAGGAACAGA AACTTTGGCA TTCTCATGCT TATGAGGTCA AATCGGGTCT CTGGGTGAAC CCCAGAGTTC
CAGAGCTTAT TGGGAAACCG GAGCTCGAAA ACCTAGCCAA AACTTACGGC AAATTCTGGT GTACGTGGCA GGCTGACAGA
GGGGACAGGC TTCCTATGGG TGCACCTGCG CTGATGATGT CTCCACAAGC AGTAAGTCCT GGTTTGGTGA GGGGAGAGTT
GGTGCATGAG AGGGATGCCA AGTACAGTAT TTCCTCAAAG AGCCTGAAAA GCTCAAGGGT GGAGATTCCT GAACCAGAGA
TGATCAATCC CTTGGCTGAC TACTGGAAGC AGCATGGCAA AGGATTTGCC ATTGACATCG ACGAGACTCA GATCAAGTTA
AGGGCACCTT TTCCTTGA

>Vigan.08G098700.01
MASTDKSSEP TPAKGPEPTP GKAMGMGQHI IDKGAMMIQS LEPIKQISHH ACSFAIYSHD MSRQIETHHY CSRLHQNFMQ
CAVYDSDESD ARLLGVEYIV SDDIFETMPP EEQKLWHSHA YEVKSGLWVN PRVPELIGKP ELENLAKTYG KFWCTWQADR
GDRLPMGAPA LMMSPQAVSP GLVRGELVHE RDAKYSISSK SLKSSRVEIP EPEMINPLAD YWKQHGKGFA IDIDETQIKL
RAPFP*