GBrowse Details

Vigan.08G099100.01

Basic Information:
Name: Vigan.08G099100.01
Multiple alignment
Variant Information
Position: Chr08:8347851..8350894 (+ strand)
Length: 3044
Functional Information:
Description: Similar to Uncharacterized protein. [I1LD90, Glycine max]
GO: Biological Process: sucrose transport (GO:0015770)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: integral to plasma membrane (GO:0005887)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: sucrose transmembrane transporter activity (GO:0008515)
Molecular Function: transmembrane transporter activity (GO:0022857)
InterPro: General substrate transporter (IPR005828)
Sucrose/H+ symporter, plant (IPR005989)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:28.10,10.67,99.39,8.64,16.10,125.22,2.31,10.89
Arabidopsis thaliana homolog: AT1G22710.1, AT1G66570.1, AT1G71880.1, AT1G71890.1, AT2G14670.1, AT5G06170.1, AT5G43610.1
Automatic updates:
Name: NM_001249369 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sucrose transporter (SUT1), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001348923 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sucrose transporter (SUT1), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:8347851..8347924 (+ strand)
Length: 74
Type: five_prime_UTR
Position: Chr08:8347925..8349202 (+ strand)
Length: 1278
Type: CDS
Position: Chr08:8350035..8350098 (+ strand)
Length: 64
Type: CDS
Position: Chr08:8350186..8350229 (+ strand)
Length: 44
Type: CDS
Position: Chr08:8350319..8350498 (+ strand)
Length: 180
Type: CDS
Position: Chr08:8350499..8350894 (+ strand)
Length: 396
Type: three_prime_UTR


>Vigan.08G099100.01
CTCAATTATA AAACCCCTCA ACACTCTCGC AAACCACACA TCACAAAACT AAACAACACA CACTCTCTTC CAACATGGAC
TCTCTCTCTG CCACCAAACA CCACAACAAT CTCCCCAAGC CTTCCTCCCT CCACATGGAG GCTCCGCCGC CGGAGCCCAG
TCCTCTCCGG AAGATCATGG TTGTGGCATC CATTGCCGCA GGGGTGCAGT TCGGCTGGGC CCTTCAGCTC TCCCTCCTCA
CCCCATACGT CCAGCTCTTG GGAATTCCCC ACACTTGGGC CTCCTTCATC TGGCTCTGCG GCCCAATCTC CGGCATGCTG
GTCCAGCCCA TCGTCGGCTA CCACAGCGAC CGCTGCACTT CCCGCTTCGG CCGCCGTCGC CCCTTCATCG CCGCCGGAGC
CCTGGCCGTT GCCATCGCCG TCTTTCTCAT AGGCTACGCT GCCGACCTCG GCCACATTTT CGGCGACTCC CTCGCCAAGA
AAACCCGCCC ACGCGCCATC GCCATCTTCG TCGTCGGCTT CTGGATCCTG GACGTGGCCA ATAACATGCT CCAGGGCCCC
TGCCGTGCCC TCCTCGCCGA CCTCTCCGCC GGCGACCACC GCAAGACGCG CAACGCAAAC GCCTTCTTCT CCTTCTTCAT
GGCCGTGGGC AACGTCCTGG GGTACGCCGC GGGGTCCTAC AGCGGCCTCC ACCACGTCTT CCCCTTCACC AAAACTAAAG
CCTGCGACGT CTACTGCGCC AATCTGAAAA GCTGCTTCTT CCTATCCATA GCGCTCCTCC TCAGTCTGGC CACCATCGCC
CTCATTTACG TGAAGGAGAA CACGGTGCCG TCGGAAAAAA GCACCGCGAG CGTTGCGGAA GAAGATGGGT CCCACGGGGG
CATGCCCTGT TTTGGGCAGT TATTCGGTGC GTTTCGGGAA CTGAAGCGTC CCATGTGGAT CCTTCTCTTG GTGACGTGTC
TCAACTGGAT TGCGTGGTTC CCCTTCCTTC TCTTCGACAC CGACTGGATG GGCCATGAGG TCTACGGTGG AACCGTCGGA
GAAGGAAAGG CCTACGATAG AGGCGTGCGC GCCGGTGCGT TAGGTCTCAT GTTGAACTCT CTGGTCCTCG GAGCCACTTC
CTTGGGCGTC GATGTCCTCG CGCGTGGAGT CGGGGGCGTC AAGAGGCTCT GGGGAATTGT CAACTTCCTT CTCGCTGTCT
GTTTGGCCAT GACCGTTTTG GTCACCAAGA TGGCCCAGCA TTCTCGCCAG TACACTGACC TCCCCGGCGG CATCCACGAG
CCCCTCCCTC CTCCCTCCGG CGTCAAAGCC GGCGCGTTGG CCCTCTTTTC CGTCCTCGGA ATCCCTCTCG CGATTACTTA
CAGCATACCC TTTGCTCTGG CGTCAATATT CTCCACCACC TCAGGGGCAG GACAAGGGTT ATCTCTCGGA GTCCTCAATC
TTGCAATCGT CATACCACAG ATGGTGGTGT CTGTGATCAG TGGACCATGG GATGATCTAT TTGGCGGCGG TAACTTGCCG
GCGTTCGTGG TGGGTGCGGT GGCGGCTGCG GCCAGTGGCA TTCTATCCCT AATCCTGCTG CCATCTCCAC CGCCGGATTT
GGCGAAAACT GCAACCGCAG CTGGGGGAGG GTTCCATTAA TGAGTTGATG ATGTTTGTGT TTTTGTCCAA AAAGGAGCAC
GCACGTTTTT TTTTTGTTTG TTTGAAGCCC AAGAAATGCT ACAATTGCCA CTGGCATGAA TGACTAATAA CAGTCATTTT
AATTGTAAAG CTTGAGGTGG GTGTACATAA CCCTGTTGAA GCAGGAGGCA GCCCTGTCCT AATTTATATG GGTTGTGAGG
GGAATCTAGT GATTCCAGTT ACCATGCATG GATGTTAGTC CAGTAATAAC ATATATATAC ATATATATAT ATATATATAT
GTATGTGGGC TACACTACTT TCCTCTTTCC CCACTTACTT TCCATTCTCT TCTTCTCCAC CCATTAGTAT ACTACTACTA
CTATGATAAT AACATTCTCT CTTATCTCCA TCACAA

>Vigan.08G099100.01
ATGGACTCTC TCTCTGCCAC CAAACACCAC AACAATCTCC CCAAGCCTTC CTCCCTCCAC ATGGAGGCTC CGCCGCCGGA
GCCCAGTCCT CTCCGGAAGA TCATGGTTGT GGCATCCATT GCCGCAGGGG TGCAGTTCGG CTGGGCCCTT CAGCTCTCCC
TCCTCACCCC ATACGTCCAG CTCTTGGGAA TTCCCCACAC TTGGGCCTCC TTCATCTGGC TCTGCGGCCC AATCTCCGGC
ATGCTGGTCC AGCCCATCGT CGGCTACCAC AGCGACCGCT GCACTTCCCG CTTCGGCCGC CGTCGCCCCT TCATCGCCGC
CGGAGCCCTG GCCGTTGCCA TCGCCGTCTT TCTCATAGGC TACGCTGCCG ACCTCGGCCA CATTTTCGGC GACTCCCTCG
CCAAGAAAAC CCGCCCACGC GCCATCGCCA TCTTCGTCGT CGGCTTCTGG ATCCTGGACG TGGCCAATAA CATGCTCCAG
GGCCCCTGCC GTGCCCTCCT CGCCGACCTC TCCGCCGGCG ACCACCGCAA GACGCGCAAC GCAAACGCCT TCTTCTCCTT
CTTCATGGCC GTGGGCAACG TCCTGGGGTA CGCCGCGGGG TCCTACAGCG GCCTCCACCA CGTCTTCCCC TTCACCAAAA
CTAAAGCCTG CGACGTCTAC TGCGCCAATC TGAAAAGCTG CTTCTTCCTA TCCATAGCGC TCCTCCTCAG TCTGGCCACC
ATCGCCCTCA TTTACGTGAA GGAGAACACG GTGCCGTCGG AAAAAAGCAC CGCGAGCGTT GCGGAAGAAG ATGGGTCCCA
CGGGGGCATG CCCTGTTTTG GGCAGTTATT CGGTGCGTTT CGGGAACTGA AGCGTCCCAT GTGGATCCTT CTCTTGGTGA
CGTGTCTCAA CTGGATTGCG TGGTTCCCCT TCCTTCTCTT CGACACCGAC TGGATGGGCC ATGAGGTCTA CGGTGGAACC
GTCGGAGAAG GAAAGGCCTA CGATAGAGGC GTGCGCGCCG GTGCGTTAGG TCTCATGTTG AACTCTCTGG TCCTCGGAGC
CACTTCCTTG GGCGTCGATG TCCTCGCGCG TGGAGTCGGG GGCGTCAAGA GGCTCTGGGG AATTGTCAAC TTCCTTCTCG
CTGTCTGTTT GGCCATGACC GTTTTGGTCA CCAAGATGGC CCAGCATTCT CGCCAGTACA CTGACCTCCC CGGCGGCATC
CACGAGCCCC TCCCTCCTCC CTCCGGCGTC AAAGCCGGCG CGTTGGCCCT CTTTTCCGTC CTCGGAATCC CTCTCGCGAT
TACTTACAGC ATACCCTTTG CTCTGGCGTC AATATTCTCC ACCACCTCAG GGGCAGGACA AGGGTTATCT CTCGGAGTCC
TCAATCTTGC AATCGTCATA CCACAGATGG TGGTGTCTGT GATCAGTGGA CCATGGGATG ATCTATTTGG CGGCGGTAAC
TTGCCGGCGT TCGTGGTGGG TGCGGTGGCG GCTGCGGCCA GTGGCATTCT ATCCCTAATC CTGCTGCCAT CTCCACCGCC
GGATTTGGCG AAAACTGCAA CCGCAGCTGG GGGAGGGTTC CATTAA

>Vigan.08G099100.01
MDSLSATKHH NNLPKPSSLH MEAPPPEPSP LRKIMVVASI AAGVQFGWAL QLSLLTPYVQ LLGIPHTWAS FIWLCGPISG
MLVQPIVGYH SDRCTSRFGR RRPFIAAGAL AVAIAVFLIG YAADLGHIFG DSLAKKTRPR AIAIFVVGFW ILDVANNMLQ
GPCRALLADL SAGDHRKTRN ANAFFSFFMA VGNVLGYAAG SYSGLHHVFP FTKTKACDVY CANLKSCFFL SIALLLSLAT
IALIYVKENT VPSEKSTASV AEEDGSHGGM PCFGQLFGAF RELKRPMWIL LLVTCLNWIA WFPFLLFDTD WMGHEVYGGT
VGEGKAYDRG VRAGALGLML NSLVLGATSL GVDVLARGVG GVKRLWGIVN FLLAVCLAMT VLVTKMAQHS RQYTDLPGGI
HEPLPPPSGV KAGALALFSV LGIPLAITYS IPFALASIFS TTSGAGQGLS LGVLNLAIVI PQMVVSVISG PWDDLFGGGN
LPAFVVGAVA AAASGILSLI LLPSPPPDLA KTATAAGGGF H*