GBrowse Details

Vigan.08G129600.01

Basic Information:
Name: Vigan.08G129600.01
Multiple alignment
Variant Information
Position: Chr08:11389501..11390833 (- strand)
Length: 1333
Functional Information:
Description: Similar to Uncharacterized protein. [I1LCF7, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.00,3.97,0.00,0.19,0.02
Arabidopsis thaliana homolog: AT4G13480.1
Automatic updates:
Name: BT097047 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-15J22 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:11389501..11389791 (- strand)
Length: 291
Type: three_prime_UTR
Position: Chr08:11389792..11390293 (- strand)
Length: 502
Type: CDS
Position: Chr08:11390371..11390500 (- strand)
Length: 130
Type: CDS
Position: Chr08:11390577..11390733 (- strand)
Length: 157
Type: CDS
Position: Chr08:11390734..11390833 (- strand)
Length: 100
Type: five_prime_UTR


>Vigan.08G129600.01
CTGGTATAAA TATGCAGCAA ACATTGAACA CAAATCAGTA GCACAGAATT TACAACACAA AAACTTTCCC AAAAGACAAC
AACTTTAGAA GACTTTTTGT ATGTATTGGG GAGTTATGGC AGGCAACATG GGATGGGGAA TGATAGAGGA ACAAGGATGG
AGGAAGGGTC CTTGGACTGC TGAAGAAGAC AGATTGCTCA TTCAGTATGT CAGATTGCAT GGTGAAGGCA GATGGAACTC
TGTTGCAAGA CTTGCAGGAC TGAAAAGAAA TGGAAAGAGC TGCAGACTGA GATGGGTGAA TTACCTGAGA CCAGACCTAA
AGAAGGGTCA GATAACACCA CAGGAAGAAA GCATAATTCA GGAGCTGCAT GCTAGGTGGG GAAACAGGTG GTCAACAATT
GCAAGGAGCT TGCCAGGAAG AACTGACAAT GAGATCAAGA ACTATTGGAG GACCCATTTC AAGAAAAAGG CTAAAAGCCC
TTCTGATGCT GCTGAGAAGG CTAGAATCCG TTCCTCAAGG AGGCAGCAAT TTCAACAGCA ACAACTGCAG TTGAAGCATC
AGCAGCAGGT TCAGCAGCAG CAGCAGCAAT TCCAATTCAA CTTGGACATA AAAGGGATCA TAAACTTGCT TGAAGAAAAT
GATCACAGAG TCCCTTCTAC ATCTCAAGAG ACACAAGAAA TGGTTAACAT GTGTCCAAAC ACTTCAGAGC AGCAGGGTTA
CTTCTACTCT ATGTTCAATG TCAGTGACAA TGTCTCTGCA CCAGAGTCCT CAAACGAAGA AATTCTCTGG GATGGACTGT
GGAACTTGGA CGATGTTCTT TGCAATTTCA ATGCAGCAAG TGCTACAAGC AAAACTAGTT TACACAATTT AGTCACTCCT
TTCAGTTAAA GTTATTTTTC TTTTATCTAT TTAGCCTTGA AAACTGCTAG AAAGATTTGT ACTACAAATA TGAGTCGCGG
CTTGATAAGG CTCCTAAACA AGGAGCTCAG AGTTAGGATT AATTGTTTCT TGAATGTGTG CAAGTCAGTG TAGTGACTAG
TGAGTGATTT TCTGAAGGTG AGTTATTGTA TAACCCCTTA ATAAAGTGTC TCAAATTTTG CTCATAAAGT CTCAAATTTG
TTTGCTTTTT TGCTTTTAAG TTAACAACTT TTCTTGCTAT AGGAAAGTGG AAGAAATGAA 

>Vigan.08G129600.01
ATGTATTGGG GAGTTATGGC AGGCAACATG GGATGGGGAA TGATAGAGGA ACAAGGATGG AGGAAGGGTC CTTGGACTGC
TGAAGAAGAC AGATTGCTCA TTCAGTATGT CAGATTGCAT GGTGAAGGCA GATGGAACTC TGTTGCAAGA CTTGCAGGAC
TGAAAAGAAA TGGAAAGAGC TGCAGACTGA GATGGGTGAA TTACCTGAGA CCAGACCTAA AGAAGGGTCA GATAACACCA
CAGGAAGAAA GCATAATTCA GGAGCTGCAT GCTAGGTGGG GAAACAGGTG GTCAACAATT GCAAGGAGCT TGCCAGGAAG
AACTGACAAT GAGATCAAGA ACTATTGGAG GACCCATTTC AAGAAAAAGG CTAAAAGCCC TTCTGATGCT GCTGAGAAGG
CTAGAATCCG TTCCTCAAGG AGGCAGCAAT TTCAACAGCA ACAACTGCAG TTGAAGCATC AGCAGCAGGT TCAGCAGCAG
CAGCAGCAAT TCCAATTCAA CTTGGACATA AAAGGGATCA TAAACTTGCT TGAAGAAAAT GATCACAGAG TCCCTTCTAC
ATCTCAAGAG ACACAAGAAA TGGTTAACAT GTGTCCAAAC ACTTCAGAGC AGCAGGGTTA CTTCTACTCT ATGTTCAATG
TCAGTGACAA TGTCTCTGCA CCAGAGTCCT CAAACGAAGA AATTCTCTGG GATGGACTGT GGAACTTGGA CGATGTTCTT
TGCAATTTCA ATGCAGCAAG TGCTACAAGC AAAACTAGTT TACACAATTT AGTCACTCCT TTCAGTTAA

>Vigan.08G129600.01
MYWGVMAGNM GWGMIEEQGW RKGPWTAEED RLLIQYVRLH GEGRWNSVAR LAGLKRNGKS CRLRWVNYLR PDLKKGQITP
QEESIIQELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF KKKAKSPSDA AEKARIRSSR RQQFQQQQLQ LKHQQQVQQQ
QQQFQFNLDI KGIINLLEEN DHRVPSTSQE TQEMVNMCPN TSEQQGYFYS MFNVSDNVSA PESSNEEILW DGLWNLDDVL
CNFNAASATS KTSLHNLVTP FS*