GBrowse Details

Vigan.08G132300.01

Basic Information:
Name: Vigan.08G132300.01
Multiple alignment
Variant Information
Position: Chr08:11622631..11626224 (- strand)
Length: 3594
Functional Information:
Description: Similar to Uncharacterized protein. [I1LCE1, Glycine max]
GO: Biological Process: cellulose biosynthetic process (GO:0030244)
Cellular Component: membrane (GO:0016020)
Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760)
InterPro: Cellulose synthase (IPR005150)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.46,1.10,19.90,2.98,6.90,5.14,15.64,1.90
Automatic updates:
Name: LC500230 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Enrei GmCSLM1 mRNA for UDP glucuronic acid:beta-amyrin glucuronosyltransferase, complete cds.
PubMed ID: 33199711 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:11622631..11622792 (- strand)
Length: 162
Type: three_prime_UTR
Position: Chr08:11622793..11623350 (- strand)
Length: 558
Type: CDS
Position: Chr08:11623457..11623804 (- strand)
Length: 348
Type: CDS
Position: Chr08:11623896..11624065 (- strand)
Length: 170
Type: CDS
Position: Chr08:11624181..11624280 (- strand)
Length: 100
Type: CDS
Position: Chr08:11624354..11624566 (- strand)
Length: 213
Type: CDS
Position: Chr08:11624836..11624958 (- strand)
Length: 123
Type: CDS
Position: Chr08:11625299..11625406 (- strand)
Length: 108
Type: CDS
Position: Chr08:11625489..11626094 (- strand)
Length: 606
Type: CDS
Position: Chr08:11626095..11626224 (- strand)
Length: 130
Type: five_prime_UTR


>Vigan.08G132300.01
AAAATATTTT TTTCCGATAA AAGCTAAGTT GGGCAGTGAA AAGTTTCATG CTTTCTATCA GATATTTCAA TGAACTAGAA
GAACAGATAC AGTCTTTAAA CCTTTAGATC ATTGGAAGGA AGGAAGAACA ATGGAGGAAA CTCTTCCTCT CAGTGTTAGC
CATGTGAATA AGTCTTTGGT TCTCACCAAT AGACTATACA TGCTCCTCCA TTTTTCTGCT CTTTGTTTCT TGGTTTATTA
TAGGCTGTGT TTCTTCTTTC AGGATCCACA AACGCGAGAA GCCTCTTTCT TCCCTTGGCT TCTTGTTTTT GCCTCTGAAA
TCATTCTCTC CTTCATTTGG ATTCTTAATC AAGCTTTTCG TTGGCACCCC ATTTCCAGAA CTGTGTTTCC TGAGCGATTA
CCACAAGATG ACAATCTCCC TCCCCTGGAT GTGTTCATAT GCACTGCAGA CCCCACTAAG GAACCCACTT CGGACGTAAT
GAACACTTTG TTATCGGCCA TGGCACTGGA TTACCCACCA GAGAAGCTGC ATCTGTATGT TTCTGATGAT GGGGGTTCGC
CTGTCACCTT GAATGCCATG AAGGAGGCTT CGAAATTTGC GAGGTGGTGG CTTCCTTTCT GCACAAGATA CAAAATAGAA
TGTAGGTGCC CCAAGGCTTA CTTTTCTATC TCAGAGAGTG ATGATGTTGA TTTTGATGTG AGCTTTGAGT TTCTTGCAGA
CAAGAAAATG ATCAAGGAAA AGTATGAGGC TTTTGAAGAA GGCATAAAAA GAGTAAAAGA AGATCAGGAC AACTCTGGAG
ATACTACTGT CAGAAGAAGT CAAAATCATA CACCTATTAT AGAGGTGATA CAGGAGAATA GCAGCAGTGA AATAGAGCAG
GTGAAATTGC CTTTCCTTGT CTATGTTTCC CGTGAGAAAA AGCCTTCTCA TCCCCACCAT TTCAAAGCCG GGGCCCTCAA
TTCCCTTTAC CGAGTCTCTG CTGTCATAAG CAATGCTCCG TACATTCTAG TGCTGGATTG TGACATGTTC TGCAATAGCC
CAGCTTCAGC ACGCCAAGCA TTGTGTTTCC ACCTTAATCC CGAGATATCT CATTCACTTG CTTTTGTTCA ATTTCCTCAG
AAATATCACA ACATAAGCAA GAACGACATA TATGACAGTC AGCACAGATC AGCATATAAA GTTCTATGGC AAGGTATGGA
TGGGCTCATG GGACCGGTAT TGTCTGGCAC AGGCTTCTAT ATAAAAAGGG AATCACTATA TGGAAATTAC AAAATCAAAG
ACACTGACCT TGAACTCCAA CAATATGTTG GCACATCCAA TGAGTTCATG AAATCCTTAA ACCAAAACTG CACTACAGAT
TCAGTCACAG CTGGACGTAC ATTGCCTTTA AAGGAGACTC TTCTATTGGC TTCTTGTAAC TACGAAATTG GGACTCAATG
GGGTAAAGAG GTTGGGTTCC TGTATGGTAC AGTATGTGAA GATGTTCACA CCGGATTCAT ATTGAATTGC AATGGTTGGA
ATTCAGTGTT GTGTGATCCA CCACAGGCAC AGTTTCTAGG AAATGGTACC ACTAATTTGA ATGATTTACT AGTTCAAGGC
ACCAGATGGT ACTGTGGACT GCTTGATATT GGTTTAAGCA GGTTTTGCCC TCTTATATGT GGGCCTTTAA GGATGTCTAT
ACTTCAGAGT CTTTGTTATG CACAACTAAC ATATTTCCCT CTCTATTGCT TGCCCCTTTG GTGTTTAGCA ATTGTCCCTC
AGCTTTGTCT GATAAGTGGA ATTCCTTTGT ACCCAAAGGT CTCAGACCCA TTTTTCTTCA TTTTTCTGTT TATCCCTCTA
TCAGTTCTCA CCAAGCACAT TGTTGAAGTG ATTTCAACTG GAGGAACATT CAGAAAATGG ATAATTGAAC AAAGGATGTG
GATGATTGTA TCAATCACAT CTCATCTATA TGGATGTTTG GATGCTCTAC TGAAGAAATT TGGTTTGAAA GATGCTAGTT
TCTTGCCAAC CAATAAAGTT GAGGATGAGG AACAGACTAG GCTTTACCAA ATGGACAAAT ATGACTTTAG AACATCAAAC
ATGTTTCTGG TCCCAATGGT TGCACTCCTC AGCATCAACA TATCTTGCTT CATAGCGGGC ATATACAGAG TGGTATCAGT
GGGAAATTGG GACCAGATGT CCATACAGCT TTTGCTTACA TCTTATATCA TTGTTTTCAA CTATCCAATA ATTGAAGGGC
TTCTTATAAG AAAAGATGTA GGGCGCATTT ATCCTTCACT TCCTTTAGTT CTAACATCAA ATATCTTGGC CACAACCATC
GCTTGCACAC TTTACTCTTT ACTAAACAAA GTATAAAGAT CACTTTTCTC TGGGCCAAGT AACATTCATC CACCTTTGCT
TTTAATGCAC ATGGATGCTG TGTAGTGGAG AACATAACTG CTGTAACAGT GTAACATGAT GTTCCATCAA ATAAAGCAAT
ACATTCAAAA ATCCACACAC TTCTTACATT AGTCATGC

>Vigan.08G132300.01
ATGGAGGAAA CTCTTCCTCT CAGTGTTAGC CATGTGAATA AGTCTTTGGT TCTCACCAAT AGACTATACA TGCTCCTCCA
TTTTTCTGCT CTTTGTTTCT TGGTTTATTA TAGGCTGTGT TTCTTCTTTC AGGATCCACA AACGCGAGAA GCCTCTTTCT
TCCCTTGGCT TCTTGTTTTT GCCTCTGAAA TCATTCTCTC CTTCATTTGG ATTCTTAATC AAGCTTTTCG TTGGCACCCC
ATTTCCAGAA CTGTGTTTCC TGAGCGATTA CCACAAGATG ACAATCTCCC TCCCCTGGAT GTGTTCATAT GCACTGCAGA
CCCCACTAAG GAACCCACTT CGGACGTAAT GAACACTTTG TTATCGGCCA TGGCACTGGA TTACCCACCA GAGAAGCTGC
ATCTGTATGT TTCTGATGAT GGGGGTTCGC CTGTCACCTT GAATGCCATG AAGGAGGCTT CGAAATTTGC GAGGTGGTGG
CTTCCTTTCT GCACAAGATA CAAAATAGAA TGTAGGTGCC CCAAGGCTTA CTTTTCTATC TCAGAGAGTG ATGATGTTGA
TTTTGATGTG AGCTTTGAGT TTCTTGCAGA CAAGAAAATG ATCAAGGAAA AGTATGAGGC TTTTGAAGAA GGCATAAAAA
GAGTAAAAGA AGATCAGGAC AACTCTGGAG ATACTACTGT CAGAAGAAGT CAAAATCATA CACCTATTAT AGAGGTGATA
CAGGAGAATA GCAGCAGTGA AATAGAGCAG GTGAAATTGC CTTTCCTTGT CTATGTTTCC CGTGAGAAAA AGCCTTCTCA
TCCCCACCAT TTCAAAGCCG GGGCCCTCAA TTCCCTTTAC CGAGTCTCTG CTGTCATAAG CAATGCTCCG TACATTCTAG
TGCTGGATTG TGACATGTTC TGCAATAGCC CAGCTTCAGC ACGCCAAGCA TTGTGTTTCC ACCTTAATCC CGAGATATCT
CATTCACTTG CTTTTGTTCA ATTTCCTCAG AAATATCACA ACATAAGCAA GAACGACATA TATGACAGTC AGCACAGATC
AGCATATAAA GTTCTATGGC AAGGTATGGA TGGGCTCATG GGACCGGTAT TGTCTGGCAC AGGCTTCTAT ATAAAAAGGG
AATCACTATA TGGAAATTAC AAAATCAAAG ACACTGACCT TGAACTCCAA CAATATGTTG GCACATCCAA TGAGTTCATG
AAATCCTTAA ACCAAAACTG CACTACAGAT TCAGTCACAG CTGGACGTAC ATTGCCTTTA AAGGAGACTC TTCTATTGGC
TTCTTGTAAC TACGAAATTG GGACTCAATG GGGTAAAGAG GTTGGGTTCC TGTATGGTAC AGTATGTGAA GATGTTCACA
CCGGATTCAT ATTGAATTGC AATGGTTGGA ATTCAGTGTT GTGTGATCCA CCACAGGCAC AGTTTCTAGG AAATGGTACC
ACTAATTTGA ATGATTTACT AGTTCAAGGC ACCAGATGGT ACTGTGGACT GCTTGATATT GGTTTAAGCA GGTTTTGCCC
TCTTATATGT GGGCCTTTAA GGATGTCTAT ACTTCAGAGT CTTTGTTATG CACAACTAAC ATATTTCCCT CTCTATTGCT
TGCCCCTTTG GTGTTTAGCA ATTGTCCCTC AGCTTTGTCT GATAAGTGGA ATTCCTTTGT ACCCAAAGGT CTCAGACCCA
TTTTTCTTCA TTTTTCTGTT TATCCCTCTA TCAGTTCTCA CCAAGCACAT TGTTGAAGTG ATTTCAACTG GAGGAACATT
CAGAAAATGG ATAATTGAAC AAAGGATGTG GATGATTGTA TCAATCACAT CTCATCTATA TGGATGTTTG GATGCTCTAC
TGAAGAAATT TGGTTTGAAA GATGCTAGTT TCTTGCCAAC CAATAAAGTT GAGGATGAGG AACAGACTAG GCTTTACCAA
ATGGACAAAT ATGACTTTAG AACATCAAAC ATGTTTCTGG TCCCAATGGT TGCACTCCTC AGCATCAACA TATCTTGCTT
CATAGCGGGC ATATACAGAG TGGTATCAGT GGGAAATTGG GACCAGATGT CCATACAGCT TTTGCTTACA TCTTATATCA
TTGTTTTCAA CTATCCAATA ATTGAAGGGC TTCTTATAAG AAAAGATGTA GGGCGCATTT ATCCTTCACT TCCTTTAGTT
CTAACATCAA ATATCTTGGC CACAACCATC GCTTGCACAC TTTACTCTTT ACTAAACAAA GTATAA

>Vigan.08G132300.01
MEETLPLSVS HVNKSLVLTN RLYMLLHFSA LCFLVYYRLC FFFQDPQTRE ASFFPWLLVF ASEIILSFIW ILNQAFRWHP
ISRTVFPERL PQDDNLPPLD VFICTADPTK EPTSDVMNTL LSAMALDYPP EKLHLYVSDD GGSPVTLNAM KEASKFARWW
LPFCTRYKIE CRCPKAYFSI SESDDVDFDV SFEFLADKKM IKEKYEAFEE GIKRVKEDQD NSGDTTVRRS QNHTPIIEVI
QENSSSEIEQ VKLPFLVYVS REKKPSHPHH FKAGALNSLY RVSAVISNAP YILVLDCDMF CNSPASARQA LCFHLNPEIS
HSLAFVQFPQ KYHNISKNDI YDSQHRSAYK VLWQGMDGLM GPVLSGTGFY IKRESLYGNY KIKDTDLELQ QYVGTSNEFM
KSLNQNCTTD SVTAGRTLPL KETLLLASCN YEIGTQWGKE VGFLYGTVCE DVHTGFILNC NGWNSVLCDP PQAQFLGNGT
TNLNDLLVQG TRWYCGLLDI GLSRFCPLIC GPLRMSILQS LCYAQLTYFP LYCLPLWCLA IVPQLCLISG IPLYPKVSDP
FFFIFLFIPL SVLTKHIVEV ISTGGTFRKW IIEQRMWMIV SITSHLYGCL DALLKKFGLK DASFLPTNKV EDEEQTRLYQ
MDKYDFRTSN MFLVPMVALL SINISCFIAG IYRVVSVGNW DQMSIQLLLT SYIIVFNYPI IEGLLIRKDV GRIYPSLPLV
LTSNILATTI ACTLYSLLNK V*