GBrowse Details

Vigan.08G191700.01

Basic Information:
Name: Vigan.08G191700.01
Multiple alignment
Variant Information
Position: Chr08:17005156..17009089 (- strand)
Length: 3934
Functional Information:
Description: Similar to Uncharacterized protein. [I1JBB6, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.54,2.88,16.40,4.45,10.13,9.28,12.91,14.63
Arabidopsis thaliana homolog: AT1G48210.1, AT2G47060.4, AT3G17410.1, AT3G62220.1
Automatic updates:
Name: NM_001254356 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max pto-interacting protein 1-like (LOC100808383), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:17005156..17005611 (- strand)
Length: 456
Type: three_prime_UTR
Position: Chr08:17005612..17005740 (- strand)
Length: 129
Type: CDS
Position: Chr08:17006220..17006306 (- strand)
Length: 87
Type: CDS
Position: Chr08:17006460..17006592 (- strand)
Length: 133
Type: CDS
Position: Chr08:17007014..17007287 (- strand)
Length: 274
Type: CDS
Position: Chr08:17007514..17007640 (- strand)
Length: 127
Type: CDS
Position: Chr08:17007735..17007985 (- strand)
Length: 251
Type: CDS
Position: Chr08:17008215..17008299 (- strand)
Length: 85
Type: CDS
Position: Chr08:17008300..17009089 (- strand)
Length: 790
Type: five_prime_UTR


>Vigan.08G191700.01
TTTGTCATAT CATTTCGTTT CAGGTAGTAA TCGATCTATC ACACTATTCA ATGTCACTTC GCAGAGATGA TTTCTCCGTG
CTGTTTTCAG TTTTCCGATT GGTTCTTCTT TTGTGGATGA ACGTTATTTT TAATATTTCT TCAAACGTTG ATTTCGGCCG
TTATAACTTG TTCTCGGTTT CATTGATCTG TGACTGATGG CATGGACTTT AGTTGCACTT TACTCTGATT GGCGGAAACT
TTTTCGATCC GTTTTCGTTT AGCTTCTGTA TCGATTTAGA CTTTGCTAAT TAAAACTCTG AGTTTATCAT AGTGGACTGG
AAGCAAACGC TGATTTCACG TCTCCGAAGT TCTTACACAT CATTTGTTGT TGAAGGATGG TGAAATTGTG CAAATAATTT
AGACTATAAT AATCTCGGTT TTCTATTTGA TGGTATTTGT AAGAGTTAGA CAATGTTATA TTGCGTGTTT TAATTGATAT
GAATGAAATG AGTGAAAGCA TTGCGTGTAT TCAAATTTCC ATATCATGCA AATGAAACGA AGCTATGCTG AAATACTTCA
AAGTACAAAT CATTGTAAAT GGACAGAAAC CACACCAAAT AGCGCTACCT CTTTCCTTCT TTTCTTTTGA ATTGATGAAA
ACTGCAATTG TCGCTGGGAT GTGTGTTATT TTGTAGGAAT GAACTTCTTC ATCGATGCCT TTTTTTTTTA AATACAATAT
TAAAAATTAA AAGTTGTCTG TTATCTAGTG TGATTTAATG GGCTAATAAA TATTTCAGTG AGAAAGAATC ATGAGTTGTT
TCAGCTGTTG CGAGGAGGAT GAACTCCAGA AGTCTGCTGA AAGTGGAGGA CCCTATGTAG TAAAAAATCC AGCAGGGAAT
GATGGAAATT ATCATGCTTC TGAAACTGCA AAGCAGGGCA CTCAGCCGGT TAAAGCTCAG CCCATTGAAG TTCCTAATAT
ACCAGCAGAT GAACTGAAAG AAGTTACAGA TAACTTTGGT CAAGATGCTC TGATTGGAGA GGGATCCTAT GGAAGAGTAT
ATTATGGTGT TCTTAAAAGT GGGCAGGCAG CCGCAATCAA GAACTTGGAT GCCAGTAAAC AGCCTGATGA GGAATTTTTA
GCCCAGGTTT CAATGGTATC AAGGCTGAAG CATGAAAATT TTGTTCAGTT GCTTGGATAT TGCATTGATG GAAGCTCCCG
TATTCTTGCT TATGAGTTTG CATCTAATGG ATCTCTTCAT GATATTTTGC ATGGCAGAAA AGGTGTTAAA GGAGCACAGC
CTGGTCCAGT TTTGTCATGG GCACAAAGAG TAAAGATTGC AGTAGGGGCT GCAAGAGGAC TTGAATACTT GCACGAGAAG
GCTGATCCCC ACATTATCCA CCGGGACATC AAGTCAAGCA ATGTGCTAAT CTTTGATGAT GATGTTGCTA AAATTGCAGA
TTTTGATTTA TCAAATCAAG CTCCCGACAT GGCTGCACGT CTTCATTCTA CTCGTGTCCT TGGAACCTTT GGTTATCATG
CTCCAGAATA TGCAATGACT GGACAATTGA ATGCTAAGAG TGATGTATAC AGTTTTGGGG TTGTTCTTTT GGAACTTCTG
ACTGGAAGGA AACCTGTAGA TCATACACTA CCACGCGGAC AGCAGAGTCT GGTTACTTGG GCTACACCAA AACTCAGTGA
GGATAAAGTC AGGCAGTGTG TTGATACAAG ACTAGGAGGA GAATACCCAC CCAAAGCTGT TGCTAAGATG GCTGCTGTTG
CTGCACTTTG TGTGCAATAT GAAGCTGATT TCAGACCAAA CATGAGCATT GTAGTCAAAG CTCTTCAACC TTTGCTGGCT
ACTCGACCTG GACCTGCCGG TGAAACACCA AATTAATTCT CTGTTTCTCT TTGTCTCTAT ATTTGTGAGT ATGTGCACCA
GTTTGCATGA AAAATATATA AGGTGCTTCA GAAGATGGTG GCAAATTGCT CCAGCATGAC TTTATATCCA ATTGTTTACA
CTACATTCAT TTTGTTCATA ATCCATGAGG TTCTTTGCTA TTCATTTTAA TGTATTTGTT TTACAAGTTA AAAAAATGTA
TTGGTTCTCT CTATTTTTTC CCCTTTCCAT CCTTTACTTC TGGATTATTG CCATCTTTAC GATAAAGAGT TTGGAAAACT
ACAAAACTAA ATTTAGTATA CTCAAAGCTA AGAGCAAGTC AATGTACTGC TATATGATTG ATTATTTTAA TATTTTATTA
AGATGTGTTA AATTGAGAGC TGTATAAATT ATTCATAATT CAAATTTCAG AACTCTAGGA GAAAAAGGGA AAGTATTGTT
TCACGGTTCC AT

>Vigan.08G191700.01
ATGAGTTGTT TCAGCTGTTG CGAGGAGGAT GAACTCCAGA AGTCTGCTGA AAGTGGAGGA CCCTATGTAG TAAAAAATCC
AGCAGGGAAT GATGGAAATT ATCATGCTTC TGAAACTGCA AAGCAGGGCA CTCAGCCGGT TAAAGCTCAG CCCATTGAAG
TTCCTAATAT ACCAGCAGAT GAACTGAAAG AAGTTACAGA TAACTTTGGT CAAGATGCTC TGATTGGAGA GGGATCCTAT
GGAAGAGTAT ATTATGGTGT TCTTAAAAGT GGGCAGGCAG CCGCAATCAA GAACTTGGAT GCCAGTAAAC AGCCTGATGA
GGAATTTTTA GCCCAGGTTT CAATGGTATC AAGGCTGAAG CATGAAAATT TTGTTCAGTT GCTTGGATAT TGCATTGATG
GAAGCTCCCG TATTCTTGCT TATGAGTTTG CATCTAATGG ATCTCTTCAT GATATTTTGC ATGGCAGAAA AGGTGTTAAA
GGAGCACAGC CTGGTCCAGT TTTGTCATGG GCACAAAGAG TAAAGATTGC AGTAGGGGCT GCAAGAGGAC TTGAATACTT
GCACGAGAAG GCTGATCCCC ACATTATCCA CCGGGACATC AAGTCAAGCA ATGTGCTAAT CTTTGATGAT GATGTTGCTA
AAATTGCAGA TTTTGATTTA TCAAATCAAG CTCCCGACAT GGCTGCACGT CTTCATTCTA CTCGTGTCCT TGGAACCTTT
GGTTATCATG CTCCAGAATA TGCAATGACT GGACAATTGA ATGCTAAGAG TGATGTATAC AGTTTTGGGG TTGTTCTTTT
GGAACTTCTG ACTGGAAGGA AACCTGTAGA TCATACACTA CCACGCGGAC AGCAGAGTCT GGTTACTTGG GCTACACCAA
AACTCAGTGA GGATAAAGTC AGGCAGTGTG TTGATACAAG ACTAGGAGGA GAATACCCAC CCAAAGCTGT TGCTAAGATG
GCTGCTGTTG CTGCACTTTG TGTGCAATAT GAAGCTGATT TCAGACCAAA CATGAGCATT GTAGTCAAAG CTCTTCAACC
TTTGCTGGCT ACTCGACCTG GACCTGCCGG TGAAACACCA AATTAA

>Vigan.08G191700.01
MSCFSCCEED ELQKSAESGG PYVVKNPAGN DGNYHASETA KQGTQPVKAQ PIEVPNIPAD ELKEVTDNFG QDALIGEGSY
GRVYYGVLKS GQAAAIKNLD ASKQPDEEFL AQVSMVSRLK HENFVQLLGY CIDGSSRILA YEFASNGSLH DILHGRKGVK
GAQPGPVLSW AQRVKIAVGA ARGLEYLHEK ADPHIIHRDI KSSNVLIFDD DVAKIADFDL SNQAPDMAAR LHSTRVLGTF
GYHAPEYAMT GQLNAKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSLVTW ATPKLSEDKV RQCVDTRLGG EYPPKAVAKM
AAVAALCVQY EADFRPNMSI VVKALQPLLA TRPGPAGETP N*