GBrowse Details

Vigan.08G207000.01

Basic Information:
Name: Vigan.08G207000.01
Multiple alignment
Variant Information
Position: Chr08:18696106..18699513 (- strand)
Length: 3408
Functional Information:
Description: Similar to serine/threonine-protein kinase 19 homolog isoform X1. [XP_004495087.1, Cicer arietinum]
InterPro: Serine-threonine protein kinase 19 (IPR018865)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:10.72,7.35,2.41,5.02,2.63,2.00,2.48,3.22
Arabidopsis thaliana homolog: AT2G20495.1
Automatic updates:
Name: NM_001255923 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase 19 homolog (LOC100787443), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:18696106..18696602 (- strand)
Length: 497
Type: three_prime_UTR
Position: Chr08:18696603..18696956 (- strand)
Length: 354
Type: CDS
Position: Chr08:18697759..18697830 (- strand)
Length: 72
Type: CDS
Position: Chr08:18698159..18698278 (- strand)
Length: 120
Type: CDS
Position: Chr08:18698784..18698876 (- strand)
Length: 93
Type: CDS
Position: Chr08:18699025..18699105 (- strand)
Length: 81
Type: CDS
Position: Chr08:18699227..18699300 (- strand)
Length: 74
Type: CDS
Position: Chr08:18699381..18699465 (- strand)
Length: 85
Type: CDS
Position: Chr08:18699466..18699513 (- strand)
Length: 48
Type: five_prime_UTR


>Vigan.08G207000.01
CAGATTACGA GTGGTGTGGA AATTGGAATT TGCAGCACCG CGCAGTCCAT GGAGAAATTT CCAGAATCTT CATCGAAAGG
GACAAAACGC CGTCGAGATG AAGATTCCGA CGCCGGAAAT ACATCCTCAC TCGAGGACGA TCTTACGTTC ACCGATACGT
CGGTTGCGCT TCGAATCATG CGAGCTCAGT TTCCCCACAT TCAAAAGGGT TCGGTGGAGC CTTTTATATT GAAGTCACAA
TTGTATAGCA GTGTGAAGGA CAGAACGCAA GTGGATAGGG AATTAGAGTC TCTGAGGAGG GACAAAGTTT TGCGTCTTTT
CAAATTAAAT ACTGGACAGG ACGATCATGC CGTAATGTTT TTGGATGACT ACCTTAACCA GATAGATCGT GTTGTGAAAA
GAATGGAAGG AAAGAAAGTA GAGGAATATG AAGTTTTTGG GTGGTTGAAG ACTCATGTTC TAGATTCAAA GCTAGAAACG
GGTATTGAAC ATCAGGAGCT TTGCTCACTC TTGTCACTCG GGGGAAAGGT GAAGGACAGT CACATCTCTG TTCTAATTAA
TGCTGGCGTC CTTGATGGAC TTGTAACTAA ACCTTCTCAG TCACATATGG TGGTAATGGT TGAACAACAA CATTGGCTAT
CACAATGGGC TCCAATAGAG ACACATGAAA GACTGGATGC ACCCTGCTAT CCTCGGAAAT ATCAATCTAT AAGCCACTTC
TCTAATCTTC TCAATAATTT CATATGGACC ATACTATCTC GGACTAAGTT TCTGGTTAGT TCCCTTGGCC AACTTCTTCA
ATTTGTATGG TTGTATCTTC AAATACACAA CATCCCCAAC CTTATACTCC ACTCCTTTTC TATTTTTTTC AGCATGTTGC
TTCATCCGAT TTTGGGACTG CACCAGGTGA TCCTTCAATA TATCTAACAC TTCATTTTTG TCTTGTATCA TCCCATCCAC
TTCGTTTATA GAGGTTGCTG AAACATTTCC TCTAATCACC GGAGGAGGAT CTCTTGCATA CATTACCTTG AAAGGTGTCA
TCTTAGTGGC CTCATGTTAG TTTGTATTAT ACCAGTGTTC AGCCCAACTA AGCCACCTAT GCCATTTTCT GGGTTTGGTG
CTTGTCATGC ATCTGAAATA AGTCTCCAAG CATCTGTTCA CCACTTTCGT TTGTCCATTA GTCTCCAAGC ATTACGTTGA
CTACACAGTG GTCACCTGTC CGATTCATGT TAAATTTTTT TGTGGTATTT CATTATGAGG CTCATTTGCT TAATACTCAG
TAACATACCA AATGGGTTTT GTACCAACCC TGATTGGAAA CATCGAATCA ATGCACCCTT AAATTCCTCT CAGTTGACCT
CCTGGCTCTG TTCTTCCCAC CATTAATACC AACTGAGCGC CTTATCCTCT AATGCTATAA CCAC

>Vigan.08G207000.01
ATGGAGAAAT TTCCAGAATC TTCATCGAAA GGGACAAAAC GCCGTCGAGA TGAAGATTCC GACGCCGGAA ATACATCCTC
ACTCGAGGAC GATCTTACGT TCACCGATAC GTCGGTTGCG CTTCGAATCA TGCGAGCTCA GTTTCCCCAC ATTCAAAAGG
GTTCGGTGGA GCCTTTTATA TTGAAGTCAC AATTGTATAG CAGTGTGAAG GACAGAACGC AAGTGGATAG GGAATTAGAG
TCTCTGAGGA GGGACAAAGT TTTGCGTCTT TTCAAATTAA ATACTGGACA GGACGATCAT GCCGTAATGT TTTTGGATGA
CTACCTTAAC CAGATAGATC GTGTTGTGAA AAGAATGGAA GGAAAGAAAG TAGAGGAATA TGAAGTTTTT GGGTGGTTGA
AGACTCATGT TCTAGATTCA AAGCTAGAAA CGGGTATTGA ACATCAGGAG CTTTGCTCAC TCTTGTCACT CGGGGGAAAG
GTGAAGGACA GTCACATCTC TGTTCTAATT AATGCTGGCG TCCTTGATGG ACTTGTAACT AAACCTTCTC AGTCACATAT
GGTGGTAATG GTTGAACAAC AACATTGGCT ATCACAATGG GCTCCAATAG AGACACATGA AAGACTGGAT GCACCCTGCT
ATCCTCGGAA ATATCAATCT ATAAGCCACT TCTCTAATCT TCTCAATAAT TTCATATGGA CCATACTATC TCGGACTAAG
TTTCTGGTTA GTTCCCTTGG CCAACTTCTT CAATTTGTAT GGTTGTATCT TCAAATACAC AACATCCCCA ACCTTATACT
CCACTCCTTT TCTATTTTTT TCAGCATGTT GCTTCATCCG ATTTTGGGAC TGCACCAGGT GATCCTTCAA TATATCTAA

>Vigan.08G207000.01
MEKFPESSSK GTKRRRDEDS DAGNTSSLED DLTFTDTSVA LRIMRAQFPH IQKGSVEPFI LKSQLYSSVK DRTQVDRELE
SLRRDKVLRL FKLNTGQDDH AVMFLDDYLN QIDRVVKRME GKKVEEYEVF GWLKTHVLDS KLETGIEHQE LCSLLSLGGK
VKDSHISVLI NAGVLDGLVT KPSQSHMVVM VEQQHWLSQW APIETHERLD APCYPRKYQS ISHFSNLLNN FIWTILSRTK
FLVSSLGQLL QFVWLYLQIH NIPNLILHSF SIFFSMLLHP ILGLHQVILQ YI*