GBrowse Details

Vigan.08G231000.01

Basic Information:
Name: Vigan.08G231000.01
Multiple alignment
Variant Information
Position: Chr08:21477543..21480643 (+ strand)
Length: 3101
Functional Information:
Description: Similar to Uncharacterized protein. [I1L880, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:30.64,32.30,59.33,115.35,14.29,49.33,15.30,35.43
Arabidopsis thaliana homolog: AT3G63410.1
Automatic updates:
Name: KX400819 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 2-methyl-6-phytyl-1,4-benzoquinol methyltransferase (MPBQ-MT) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001253319 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 37 kDa inner envelope membrane protein, chloroplastic-like (LOC100783986), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:21477543..21477902 (+ strand)
Length: 360
Type: five_prime_UTR
Position: Chr08:21477903..21478468 (+ strand)
Length: 566
Type: CDS
Position: Chr08:21478827..21479133 (+ strand)
Length: 307
Type: CDS
Position: Chr08:21479866..21480021 (+ strand)
Length: 156
Type: CDS
Position: Chr08:21480022..21480643 (+ strand)
Length: 622
Type: three_prime_UTR


>Vigan.08G231000.01
TTTTGGTGTA CTAATTGTTC TGAATTCTTA CTAATTGGAG AGGATAAAAA GTGTAAAAAA CTCAATTTGG TGTAACGCTA
TCTTAATAAC GTATAATTTG GTGTTGGTTT CCTTATGTAG TAGCAGTGAG TGGTTAGAAA TGAATCTGAA TTAATAGTAC
TATTTTGTGT GAGCCACACC AAATTCAACC GCCACTTTAA GGTTATGCTT CCCCTTTTTT TTCTTCTTCT TCCTTACCTA
AGCCTAATAA TTTCCCACTT TCCGCCTTCG TTTTTCTGGA TAACATCTCT GTTTCCACGA TAAACTAATG CTTTTTTTCA
ATTGAACTTT TTTTGTGGTT TTTCTGTGTA GATTGGTTCA ATGGCTTCGG TAATGCTCAG TGGAACTGAA AAGCTAACTC
TGAGAACCCT AACCGGAAAC GGGTTGGGTT TCACGGCTTC AGATTTTCAT GGTAAGGCTT TTCCCAGAGT GAGTTTTGTT
ACTACTAGCA GTGCTAGAAT CCCCAACTCT AGGAGCATGG TGGTGCCCAA GTGTAGTGTT TCGGCTTCCA GGCCAACGTC
GCAGCCCAGG TTCATTCAGC ACAAGAAAGA GGCGTTTTGG TTCTATAGGT TTCTCTCTAT TGTTTATGAC CATGTGATTA
ACCCTGGCCA TTGGACCGAG GACATGAGGG ATGAAGCCCT TGAACCCGCT GATCTCAGTT CCAGGGATAT GCTTGTTGTT
GATGTTGGTG GTGGCACGGG TTTCACCACT CTGGGAATTG TCAAGCACGT GAATGCCAAA AATGTCACCA TCCTTGACCA
GTCACCCCAC CAGCTTGCTA AGGCCAAGCA GAAGGAACCA CTCAAGGAAT GCAAGATAAT CGAAGGGGAT GCTGAGGATC
TCCCCTTTCG AACTGATTAT GCTGATCGAT ATGTATCTGC AGGAAGTATT GAGTATTGGC CCGATCCGCA GCGAGGCATC
AAGGAAGCTT ACAGAGTTTT GAAACTTGGA GGCAAGGCGT GTCTAATTGG TCCTGTGTAC CCAACATTTT GGTTGTCTCG
TTTCTTTGCA GATGTTTGGA TGCTCTTTCC CAAGGAGGAG GAGTATATTG ACTGGTTTCA AAAGGCAGGG TTTAAGGATG
TCCAACTGAA AAGGATTGGC CCAAAATGGT ATCGTGGAGT TCGCCGTCAT GGCTTGATTA TGGGTTGTTC TGTGACCGGT
GTTAAACCTG CATCTGGGGA TTCTCCTTTG CAGCTTGGTC CAAAGGAAGA AGATGTTGAA AAGCCCGTCA ATCCATTTGT
CTTCTTAATG CGCTTTCTTT TGGGTGCCTT GGCAGCTACA TGGTTTGTGT TGGTTCCTAT TTACATGTGG CTCAAAGATC
AAATTGTTCC CAAAGGTCAG CCAATCTAAG TAAGAGATAT TGGTAGTTAA ACCTTTTGAT ACTTAATCAA CTTCTAGTTC
AAAGTTTCAT CCAATTTACG TGCAACTAAG AAACATCTAT CAAACGTCAA TTAGTTTATT ATGGAATTGA GCTCAATTTT
TATGGGTGCT CTTAGCTATA TGATAATTTT GGGTGTCAGC ATATTAGTCA AAATCTAAGA GTTAGATGGC AGACTCATAA
GTTTGCACTG TTTCCAAAAA TTATGTTCGT TCCACAGCAA ATTATGATTG GAACAGTTTG AAATATGGGG GATCGTGGCT
AAATTTTGAA AAAACAAAGA ATTGTTTGGA GTTCATTTTT GGGTCAAAGG TTTTTGTTTT CCTCTTCTTC ACATACAAAT
AAATGGTTTG TGTCTTCACC TCTTTCATCT TCAACACTGC TCGTGGTCTT CGTTCTATTT TGGGTGTTGT GTTTGTGCGG
TGGGGGACCT AGTGTTGGTT TCCGTTTCGT TTCTTCATCA AAGGGCATTT ACTTTTCATT TCCAGTGATT GATTTTGATT
TGATTATTGG TTATTTTCAG TCACACACAC ATGTATCTAC TATATGATTA CAATCTCAAG AATTAAGGTT TTGAGCTTTA
TATGATATTA A

>Vigan.08G231000.01
ATGGCTTCGG TAATGCTCAG TGGAACTGAA AAGCTAACTC TGAGAACCCT AACCGGAAAC GGGTTGGGTT TCACGGCTTC
AGATTTTCAT GGTAAGGCTT TTCCCAGAGT GAGTTTTGTT ACTACTAGCA GTGCTAGAAT CCCCAACTCT AGGAGCATGG
TGGTGCCCAA GTGTAGTGTT TCGGCTTCCA GGCCAACGTC GCAGCCCAGG TTCATTCAGC ACAAGAAAGA GGCGTTTTGG
TTCTATAGGT TTCTCTCTAT TGTTTATGAC CATGTGATTA ACCCTGGCCA TTGGACCGAG GACATGAGGG ATGAAGCCCT
TGAACCCGCT GATCTCAGTT CCAGGGATAT GCTTGTTGTT GATGTTGGTG GTGGCACGGG TTTCACCACT CTGGGAATTG
TCAAGCACGT GAATGCCAAA AATGTCACCA TCCTTGACCA GTCACCCCAC CAGCTTGCTA AGGCCAAGCA GAAGGAACCA
CTCAAGGAAT GCAAGATAAT CGAAGGGGAT GCTGAGGATC TCCCCTTTCG AACTGATTAT GCTGATCGAT ATGTATCTGC
AGGAAGTATT GAGTATTGGC CCGATCCGCA GCGAGGCATC AAGGAAGCTT ACAGAGTTTT GAAACTTGGA GGCAAGGCGT
GTCTAATTGG TCCTGTGTAC CCAACATTTT GGTTGTCTCG TTTCTTTGCA GATGTTTGGA TGCTCTTTCC CAAGGAGGAG
GAGTATATTG ACTGGTTTCA AAAGGCAGGG TTTAAGGATG TCCAACTGAA AAGGATTGGC CCAAAATGGT ATCGTGGAGT
TCGCCGTCAT GGCTTGATTA TGGGTTGTTC TGTGACCGGT GTTAAACCTG CATCTGGGGA TTCTCCTTTG CAGCTTGGTC
CAAAGGAAGA AGATGTTGAA AAGCCCGTCA ATCCATTTGT CTTCTTAATG CGCTTTCTTT TGGGTGCCTT GGCAGCTACA
TGGTTTGTGT TGGTTCCTAT TTACATGTGG CTCAAAGATC AAATTGTTCC CAAAGGTCAG CCAATCTAA

>Vigan.08G231000.01
MASVMLSGTE KLTLRTLTGN GLGFTASDFH GKAFPRVSFV TTSSARIPNS RSMVVPKCSV SASRPTSQPR FIQHKKEAFW
FYRFLSIVYD HVINPGHWTE DMRDEALEPA DLSSRDMLVV DVGGGTGFTT LGIVKHVNAK NVTILDQSPH QLAKAKQKEP
LKECKIIEGD AEDLPFRTDY ADRYVSAGSI EYWPDPQRGI KEAYRVLKLG GKACLIGPVY PTFWLSRFFA DVWMLFPKEE
EYIDWFQKAG FKDVQLKRIG PKWYRGVRRH GLIMGCSVTG VKPASGDSPL QLGPKEEDVE KPVNPFVFLM RFLLGALAAT
WFVLVPIYMW LKDQIVPKGQ PI*