GBrowse Details

Vigan.08G232400.01

Basic Information:
Name: Vigan.08G232400.01
Multiple alignment
Variant Information
Position: Chr08:21766229..21768862 (+ strand)
Length: 2634
Functional Information:
Description: Similar to BI1-like protein-like. [XP_004495172.1, Cicer arietinum]
InterPro: Bax inhibitor 1-related (IPR006214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:265.42,148.99,47.21,25.99,47.07,131.40,47.84,28.53
Arabidopsis thaliana homolog: AT1G03070.1
Automatic updates:
Name: NM_001250411 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527528 (LOC100527528), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:21766229..21766414 (+ strand)
Length: 186
Type: five_prime_UTR
Position: Chr08:21766415..21766664 (+ strand)
Length: 250
Type: CDS
Position: Chr08:21766763..21766876 (+ strand)
Length: 114
Type: CDS
Position: Chr08:21767750..21767907 (+ strand)
Length: 158
Type: CDS
Position: Chr08:21768006..21768212 (+ strand)
Length: 207
Type: CDS
Position: Chr08:21768213..21768862 (+ strand)
Length: 650
Type: three_prime_UTR


>Vigan.08G232400.01
CTTTCTTTCA CCTATTCAAT TTCCACGCAC GCGCACCACG GTGGTTTTAT TTATTAATAA AACCCGCTTA ATGAACCACA
CTGATCCCAT TTCATTCCAC GCACGCAAGA TCCAAAAAGC CGTAAGCAAT TTTCTCTCTA TATCCCTACA TTTTCTCTCA
GTTTCTCAGT CGCGAGAAGA AAGAAGATGT GGAACCAGCC ATACGGGAAA ACTGATTTGG AGAGCGGGGC GCGGCCTCTG
TATCCGATGA TGCTGGAGAG CCCCGAACTG CGCTGGTCCT TCATCAGGAA AGTGTACTCC ATCATCGCCA TCCAGTTGCT
CGTCACCATC GTCATCGGCG CCGTCGTCGT CACCGTCCGC CCCATCGGCG TCTTCTTCGC CACCACCGGC GCCGGATTGG
CTCTCTACAT CGTTCTCATC TTTGTCCCCT TCATCACGTT GTGTCCACTT TACTACTATT ACCAGAAGCA TCCCGTCAAC
TACCTACTCC TTGGGCTTTT CACTGTATCT CTTTCTTTTG TCGTTGGATT GAGTTGCGCC TTTACTAGCG AGAAAGTTAT
TCTGGAAGCT GTAATACTGA CCGCCGTGGT GGTGATTGGT CTGACTCTCT ACACATTTTG GGCTGCAAGG AGAGGCCAAG
ATTTCAACTT CCTTGGCCCC TTCTTGTTCG GTGCTGTGCT AGTTCTTATG GTCTTCGCTC TGATTCAGGT TCTGTTTCCA
TTGGGTAAGT TGTCTGTGAT GATCTATGGG TGCTTGGCGG CTCTTATATT TTGTGGGTAC ATCGTATATG ATACAGACAA
CCTGATTAAG AGATATTCGT ATGATGAATT CATTTGGGCT TCGGTCTCTT TGTATCTGGA CATCATCAAT CTCTTCCTCT
CTCTGCTCAC TATTTTTAGA GCCGCTGATA ATTAGATGAT TGTATCATAT ACTGCTTCCT ATCTTGCGCA TTGTTTGTTC
TCTCTGGGAG ATGAGGGTGG GTTCTGAGAA AACAAATTCA TATGATTAAT AAATCTTTAG GGCTCACTCT TTTGCAAGGG
GTACAGTGTG TACAATGGAT TATTGTCAAA GTTGTTCATA AATAGTTTAT TGACAATGAA ATTTTGCTCT TTGTAACTGT
TCCTTTTTGT TACTTGTGCT ACTTTTTTCC TGTTACAGTT GTCAACAGTC GATAGGTGGC CTATGCACCC ATTATGCACG
AATTTATGGA GAAAGTTCAA TAAATTGAAC AAATATGGCA ATAAATGTGC ACATAACCTC GTACCCGCTT TATTTAATGA
GTTTAATAAA TATCATTCAA TAAGCATATG ATATTTTTTA TTAAACAGTA TGCATACAAA AGTCATTCAC AAAAAGACAT
CATTAAGTTT AAATAAGTTA ATTATATGTT TGTGTAATTA ATGTATTTGT TGGAATAATT ATTAGGCCTA TTAAGTCAAA
AGTGGGGAGT AGTGTGTTCA GAAAACTCTT TCAACTATAC CTAGGTTTTT GTCTTACAGT TTTTTATCTT CTTATTGTAT
TGGTTCTTTA TCATTATAAA TAGAAGAACT TGAGAAGTGT TCTTC

>Vigan.08G232400.01
ATGTGGAACC AGCCATACGG GAAAACTGAT TTGGAGAGCG GGGCGCGGCC TCTGTATCCG ATGATGCTGG AGAGCCCCGA
ACTGCGCTGG TCCTTCATCA GGAAAGTGTA CTCCATCATC GCCATCCAGT TGCTCGTCAC CATCGTCATC GGCGCCGTCG
TCGTCACCGT CCGCCCCATC GGCGTCTTCT TCGCCACCAC CGGCGCCGGA TTGGCTCTCT ACATCGTTCT CATCTTTGTC
CCCTTCATCA CGTTGTGTCC ACTTTACTAC TATTACCAGA AGCATCCCGT CAACTACCTA CTCCTTGGGC TTTTCACTGT
ATCTCTTTCT TTTGTCGTTG GATTGAGTTG CGCCTTTACT AGCGAGAAAG TTATTCTGGA AGCTGTAATA CTGACCGCCG
TGGTGGTGAT TGGTCTGACT CTCTACACAT TTTGGGCTGC AAGGAGAGGC CAAGATTTCA ACTTCCTTGG CCCCTTCTTG
TTCGGTGCTG TGCTAGTTCT TATGGTCTTC GCTCTGATTC AGGTTCTGTT TCCATTGGGT AAGTTGTCTG TGATGATCTA
TGGGTGCTTG GCGGCTCTTA TATTTTGTGG GTACATCGTA TATGATACAG ACAACCTGAT TAAGAGATAT TCGTATGATG
AATTCATTTG GGCTTCGGTC TCTTTGTATC TGGACATCAT CAATCTCTTC CTCTCTCTGC TCACTATTTT TAGAGCCGCT
GATAATTAG

>Vigan.08G232400.01
MWNQPYGKTD LESGARPLYP MMLESPELRW SFIRKVYSII AIQLLVTIVI GAVVVTVRPI GVFFATTGAG LALYIVLIFV
PFITLCPLYY YYQKHPVNYL LLGLFTVSLS FVVGLSCAFT SEKVILEAVI LTAVVVIGLT LYTFWAARRG QDFNFLGPFL
FGAVLVLMVF ALIQVLFPLG KLSVMIYGCL AALIFCGYIV YDTDNLIKRY SYDEFIWASV SLYLDIINLF LSLLTIFRAA
DN*