GBrowse Details

Vigan.08G245800.01

Basic Information:
Name: Vigan.08G245800.01
Multiple alignment
Variant Information
Position: Chr08:23928906..23930220 (+ strand)
Length: 1315
Functional Information:
Description: Similar to glutathione S-transferase PARB-like. [XP_004495977.1, Cicer arietinum]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.64,0.00,0.08,0.00,0.00,0.00
Arabidopsis thaliana homolog: AT1G02930.1
Automatic updates:
Name: KM818397 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001317557 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase F2 (GSTF2), mRNA.
PubMed ID: 30555496 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:23928906..23928935 (+ strand)
Length: 30
Type: five_prime_UTR
Position: Chr08:23928936..23929085 (+ strand)
Length: 150
Type: CDS
Position: Chr08:23929182..23929230 (+ strand)
Length: 49
Type: CDS
Position: Chr08:23929579..23930036 (+ strand)
Length: 458
Type: CDS
Position: Chr08:23930037..23930220 (+ strand)
Length: 184
Type: three_prime_UTR


>Vigan.08G245800.01
GAAAAAAATA ATTAATTTTC TGATTCAATC ATGGCGACAA TTAAACTTCA TGGAAGCCCC TTCTCAACAG CCACCATGCG
AGCTACTGCT TCCCTGTACG AGAAGGAGGT TGAATTTGAG TTTGTTCACG TTGACATGAA AAATGGTGAA CACAAAAAGG
AACCCTTCAT TTTGCTCAAC CCATTTGGGC AAGTTCCAGC GTTCGAAGAT GGAGATTTGA AGCTCTTTGA ATCAAGGGCA
ATAACTCAAT ATATTGTTCA TGAGTATGCT GATAAGGGGA CCCAACTGAT ATGCAACGAC TCGAAGAAGA TGGCAATAGT
GAGAATGTGG ATGGAAATAG AGAGCCAAAA GTACGATCAA GCAGCTTCAA AACTTGTATG GGAGGTTGCA GTAAAGCCTA
TGTATGGGAT TCCTACGGAT CCGGCGGCTG TAGAAGAGAC AGAAGGGAAA CTAGGTACTA TTCTTGATTT CTACGAGAAA
ACACTGTCTC AAAACAAATA CTTAGCAGGT GAGTGTTTCA CCTTGGCGGA TCTGCATCAC CTTCCCACCC TTCATTACTT
GATGAACACA CCGAGCAAGA AGTTGTTTGA ATCACGACCA CATGTTACTG CATGGATTGC TGATATTACA GCAAGACCAG
CTTGGTCTAA GGTTCTTGCC ATGCAGCCCA ATCTAAGCAG TAAATAGAGA CCGACCCATT TCACCTCATG TCGTGTTCTC
AATAGTTCAA AAGATGCATT GCCACCATAA GTTCATCAAA TTCGTTGCGC GGCTTCCCAT ATTCATCTTT TCAAGTTTTA
TGTAATGGAA ATTTGCTGTT GTTATCGTTA TCTTTTGAAC AAATTACCCT TGCATATGTT ATATCTTCCA A

>Vigan.08G245800.01
ATGGCGACAA TTAAACTTCA TGGAAGCCCC TTCTCAACAG CCACCATGCG AGCTACTGCT TCCCTGTACG AGAAGGAGGT
TGAATTTGAG TTTGTTCACG TTGACATGAA AAATGGTGAA CACAAAAAGG AACCCTTCAT TTTGCTCAAC CCATTTGGGC
AAGTTCCAGC GTTCGAAGAT GGAGATTTGA AGCTCTTTGA ATCAAGGGCA ATAACTCAAT ATATTGTTCA TGAGTATGCT
GATAAGGGGA CCCAACTGAT ATGCAACGAC TCGAAGAAGA TGGCAATAGT GAGAATGTGG ATGGAAATAG AGAGCCAAAA
GTACGATCAA GCAGCTTCAA AACTTGTATG GGAGGTTGCA GTAAAGCCTA TGTATGGGAT TCCTACGGAT CCGGCGGCTG
TAGAAGAGAC AGAAGGGAAA CTAGGTACTA TTCTTGATTT CTACGAGAAA ACACTGTCTC AAAACAAATA CTTAGCAGGT
GAGTGTTTCA CCTTGGCGGA TCTGCATCAC CTTCCCACCC TTCATTACTT GATGAACACA CCGAGCAAGA AGTTGTTTGA
ATCACGACCA CATGTTACTG CATGGATTGC TGATATTACA GCAAGACCAG CTTGGTCTAA GGTTCTTGCC ATGCAGCCCA
ATCTAAGCAG TAAATAG

>Vigan.08G245800.01
MATIKLHGSP FSTATMRATA SLYEKEVEFE FVHVDMKNGE HKKEPFILLN PFGQVPAFED GDLKLFESRA ITQYIVHEYA
DKGTQLICND SKKMAIVRMW MEIESQKYDQ AASKLVWEVA VKPMYGIPTD PAAVEETEGK LGTILDFYEK TLSQNKYLAG
ECFTLADLHH LPTLHYLMNT PSKKLFESRP HVTAWIADIT ARPAWSKVLA MQPNLSSK*