GBrowse Details

Vigan.08G248000.01

Basic Information:
Name: Vigan.08G248000.01
Multiple alignment
Variant Information
Position: Chr08:24325525..24333114 (+ strand)
Length: 7590
Functional Information:
Description: Similar to hydroxyisourate hydrolase. [XP_006574546.1, Glycine max]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
InterPro: Glycoside hydrolase, family 1 (IPR001360)
Glycoside hydrolase, catalytic domain (IPR013781)
Glycoside hydrolase, superfamily (IPR017853)
Glycoside hydrolase, family 1, active site (IPR018120)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.67,2.09,10.01,63.56,60.84,23.49,87.81,5.11
Arabidopsis thaliana homolog: AT1G02850.4, AT1G45191.1, AT1G60090.1, AT4G22100.1, AT4G27830.1
Structure :
Position: Chr08:24325525..24325559 (+ strand)
Length: 35
Type: five_prime_UTR
Position: Chr08:24325560..24325754 (+ strand)
Length: 195
Type: CDS
Position: Chr08:24325889..24325952 (+ strand)
Length: 64
Type: CDS
Position: Chr08:24328148..24328203 (+ strand)
Length: 56
Type: CDS
Position: Chr08:24329536..24329611 (+ strand)
Length: 76
Type: CDS
Position: Chr08:24329719..24329790 (+ strand)
Length: 72
Type: CDS
Position: Chr08:24329924..24330011 (+ strand)
Length: 88
Type: CDS
Position: Chr08:24330302..24330560 (+ strand)
Length: 259
Type: CDS
Position: Chr08:24330656..24330771 (+ strand)
Length: 116
Type: CDS
Position: Chr08:24330974..24331191 (+ strand)
Length: 218
Type: CDS
Position: Chr08:24331510..24331538 (+ strand)
Length: 29
Type: CDS
Position: Chr08:24331630..24331717 (+ strand)
Length: 88
Type: CDS
Position: Chr08:24332023..24332113 (+ strand)
Length: 91
Type: CDS
Position: Chr08:24332452..24332698 (+ strand)
Length: 247
Type: CDS
Position: Chr08:24332699..24333114 (+ strand)
Length: 416
Type: three_prime_UTR


>Vigan.08G248000.01
CTCCGTTTTG GCACATTCCT TTCTGCTGGT AATAAATGAA GTCCATGATG CCACCGAAAC GAGAAAGCTG TGAATCGATG
GAAACACCAA ACACATGCTT CACCAACGCT TTCATGCTCA CTTTCTTACT TCTGAATTTG GCTTTGGAAA CAGTCGCCGG
CGCTGATACC TATAGCAGAG ATGATTTCCC GGCCAATTTT GTTTTCGGTT CCGGCACCTC TGCTTACCAG ATAGAAGGAG
CTGCTAACGA GGAGGGAAGA AGTAGTAGCA TATGGGATAC CTTTGCACAC GCTGGATATG TGCATGGAGA AAATGGAGAC
GTAGCCTGTG ATGGGTACCA CAAGTATAAA GAAGATGTGA AGCTGATGGT GGAAACAGGA CTTGAAGCCT ATAGATTTTC
CATTTCTTGG TCCAGACTGT TACCAAATGG TAGAGGACCC GTCAATCCCA AAGGATTGCA GTACTACAAC AATCTCATCA
ATCAGCTTAT CAGCAATGGT ATCCAACCAC ATGTCACACT ACACAACTAT GACCTTCCAC AGGTTCTTGA AGATGAATAT
GGAGGATGGG TTAGTCGTCA CATCATAAGA GACTTCACAT ACTATGCTGA TGTATGTTTT AGAGAGTTTG GCGACAGAGT
TTTGTATTGG ACGACTGTCA ACGAACCCAA CGTTTTTTCC TTTGGTGGGT ATGATCAGGG AAGTTCACCA CCTCATCGAT
GTTCTCCCCC ATTTTGTGCT ATAAAGAGCA ATAGGGGCAA CTCGACATAT GAACCCTACT TGGCAGTTCA TCATATTTTG
TTAGCTCACT CTTCAGCGGC CAGATTGTAC CGGAAAAAAT ACAGGCACAA ACAACATGGA TATGTTGGTA TCTCTGTCTA
CTCGTTTGGG TTTTTTCCTC AAACAAATAC AGAGAAAGAC AGGGTAGCAA CTCAACGAGC CCGTGACTTT TTCGTTGGTT
GGGTTATGGA ACCCTTGCAA TATGGAGACT ATCCAATTTC CATGAAGACA AATGCAGGCG TAAGAATTCC GGCTTTCACA
ACTCGTGAAT CTGAACAAGT CAAGGGTTCA TTTGACTTTA TAGGAGTCAT TCACTACACC AACATCAATA TCACAGACAA
TTCTGACACC CTTAAGAACC AATTGAGAGA TTTCAACGCA GACATGGCTG CAAAGTTTTC AGGATTGGAT CTATTTTCAA
ATGAAGAGTA CCCTGTCACA CCGTGGGGTT TGCGGGAAGA ATTGAATAAT TTCAAGCTCC TTTATGGCAA TCCTCCTATA
TTCATTCATG AAAATGGTCA ACGGACAGCA AGCGATTCAT CACTACAAGA CGTGTCAAGG GTGAAATACT TGCATGGATA
TATTGGTGTA GTGCTCGATG CCTTGAGAGA TGGATTAAAC ATAAAGGGGT ATTTTGCCTG GTCTTTCTTG GATTTGTTCG
AGTTGTTGGA TGGATACAAA TCTAGCTTTG GCCTATACTA TGTTGATAGG GATGATCCAG AGTTGAAGAG ACACCCAAAG
CTCTCTGCAA AATGGTACAG CCGATTTTTG AAGAACAGAA GCACTTCTAT AGTTGGAACT GTTGAACTTG AGAAGGATCC
CTCACTCGTT TCAATTGGGC ATTTATTTGA GTAGGTTCTT TGTTTGTTAT CACGAATAAG TCATTGCACA GAGGTGTTAT
TAGTATGCTT ACTTTCCCTT AAATGCATAA GAATAAGATA CCTGGGCATA TTTCAATTCA GATGGTGAAG AAGGATAGAG
AGGCCTGGCA AGTAAAGCCG CATAGGTAAT GTATAACATA CAATAGACTT TGTATGACAT ACCATATGAT ATGCCATGCT
AAAGACAAGG GGATTTCAAA TGACAGTATA GTTTTTGGCA GTCATGTGTT TTTGTACTCA CTTTCCTCTT TCCTCTACTT
TTTTTTTTCC ACGGTAGTTA TTGATAGCTT TTATGAAGCA TTTGTCCACA TTCGTAAAGA GCTAATTGGA TTTGAAATAA
CGTTGTCCCA CACATTAATA ATTTAAGAAT AAATTTATTT TTATCTTCAA 

>Vigan.08G248000.01
ATGAAGTCCA TGATGCCACC GAAACGAGAA AGCTGTGAAT CGATGGAAAC ACCAAACACA TGCTTCACCA ACGCTTTCAT
GCTCACTTTC TTACTTCTGA ATTTGGCTTT GGAAACAGTC GCCGGCGCTG ATACCTATAG CAGAGATGAT TTCCCGGCCA
ATTTTGTTTT CGGTTCCGGC ACCTCTGCTT ACCAGATAGA AGGAGCTGCT AACGAGGAGG GAAGAAGTAG TAGCATATGG
GATACCTTTG CACACGCTGG ATATGTGCAT GGAGAAAATG GAGACGTAGC CTGTGATGGG TACCACAAGT ATAAAGAAGA
TGTGAAGCTG ATGGTGGAAA CAGGACTTGA AGCCTATAGA TTTTCCATTT CTTGGTCCAG ACTGTTACCA AATGGTAGAG
GACCCGTCAA TCCCAAAGGA TTGCAGTACT ACAACAATCT CATCAATCAG CTTATCAGCA ATGGTATCCA ACCACATGTC
ACACTACACA ACTATGACCT TCCACAGGTT CTTGAAGATG AATATGGAGG ATGGGTTAGT CGTCACATCA TAAGAGACTT
CACATACTAT GCTGATGTAT GTTTTAGAGA GTTTGGCGAC AGAGTTTTGT ATTGGACGAC TGTCAACGAA CCCAACGTTT
TTTCCTTTGG TGGGTATGAT CAGGGAAGTT CACCACCTCA TCGATGTTCT CCCCCATTTT GTGCTATAAA GAGCAATAGG
GGCAACTCGA CATATGAACC CTACTTGGCA GTTCATCATA TTTTGTTAGC TCACTCTTCA GCGGCCAGAT TGTACCGGAA
AAAATACAGG CACAAACAAC ATGGATATGT TGGTATCTCT GTCTACTCGT TTGGGTTTTT TCCTCAAACA AATACAGAGA
AAGACAGGGT AGCAACTCAA CGAGCCCGTG ACTTTTTCGT TGGTTGGGTT ATGGAACCCT TGCAATATGG AGACTATCCA
ATTTCCATGA AGACAAATGC AGGCGTAAGA ATTCCGGCTT TCACAACTCG TGAATCTGAA CAAGTCAAGG GTTCATTTGA
CTTTATAGGA GTCATTCACT ACACCAACAT CAATATCACA GACAATTCTG ACACCCTTAA GAACCAATTG AGAGATTTCA
ACGCAGACAT GGCTGCAAAG TTTTCAGGAT TGGATCTATT TTCAAATGAA GAGTACCCTG TCACACCGTG GGGTTTGCGG
GAAGAATTGA ATAATTTCAA GCTCCTTTAT GGCAATCCTC CTATATTCAT TCATGAAAAT GGTCAACGGA CAGCAAGCGA
TTCATCACTA CAAGACGTGT CAAGGGTGAA ATACTTGCAT GGATATATTG GTGTAGTGCT CGATGCCTTG AGAGATGGAT
TAAACATAAA GGGGTATTTT GCCTGGTCTT TCTTGGATTT GTTCGAGTTG TTGGATGGAT ACAAATCTAG CTTTGGCCTA
TACTATGTTG ATAGGGATGA TCCAGAGTTG AAGAGACACC CAAAGCTCTC TGCAAAATGG TACAGCCGAT TTTTGAAGAA
CAGAAGCACT TCTATAGTTG GAACTGTTGA ACTTGAGAAG GATCCCTCAC TCGTTTCAAT TGGGCATTTA TTTGAGTAG

>Vigan.08G248000.01
MKSMMPPKRE SCESMETPNT CFTNAFMLTF LLLNLALETV AGADTYSRDD FPANFVFGSG TSAYQIEGAA NEEGRSSSIW
DTFAHAGYVH GENGDVACDG YHKYKEDVKL MVETGLEAYR FSISWSRLLP NGRGPVNPKG LQYYNNLINQ LISNGIQPHV
TLHNYDLPQV LEDEYGGWVS RHIIRDFTYY ADVCFREFGD RVLYWTTVNE PNVFSFGGYD QGSSPPHRCS PPFCAIKSNR
GNSTYEPYLA VHHILLAHSS AARLYRKKYR HKQHGYVGIS VYSFGFFPQT NTEKDRVATQ RARDFFVGWV MEPLQYGDYP
ISMKTNAGVR IPAFTTRESE QVKGSFDFIG VIHYTNINIT DNSDTLKNQL RDFNADMAAK FSGLDLFSNE EYPVTPWGLR
EELNNFKLLY GNPPIFIHEN GQRTASDSSL QDVSRVKYLH GYIGVVLDAL RDGLNIKGYF AWSFLDLFEL LDGYKSSFGL
YYVDRDDPEL KRHPKLSAKW YSRFLKNRST SIVGTVELEK DPSLVSIGHL FE*