GBrowse Details

Vigan.08G276700.01

Basic Information:
Name: Vigan.08G276700.01
Multiple alignment
Variant Information
Position: Chr08:32207971..32210119 (+ strand)
Length: 2149
Functional Information:
Description: Similar to uncharacterized protein. [A2XAR5, Oryza sativa subsp. indica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.73,1.34,6.91,4.63,10.75,9.03,17.26,8.05
Arabidopsis thaliana homolog: AT2G37195.1
Automatic updates:
Name: NM_001249917 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305799 (LOC100305799), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:32207971..32208121 (+ strand)
Length: 151
Type: five_prime_UTR
Position: Chr08:32208122..32208249 (+ strand)
Length: 128
Type: CDS
Position: Chr08:32208605..32208716 (+ strand)
Length: 112
Type: CDS
Position: Chr08:32209245..32209313 (+ strand)
Length: 69
Type: CDS
Position: Chr08:32209689..32209778 (+ strand)
Length: 90
Type: CDS
Position: Chr08:32209779..32210119 (+ strand)
Length: 341
Type: three_prime_UTR


>Vigan.08G276700.01
GGGTAGATGG ATTTCAAGGC CAAGCAAGGT CCAATGTAGG TGATAGTCAC CGGCAACTTT GGTTGTTTGA AAACCTCAAC
AACTTTGTTG GTAGAAGAAT CGAATGGAAT GAGTGAGTGA AGAAGATCAG AACAGAACAC AGCACAGAAG AATGATTGAA
GCGAAGAGGA GTTCGATCTT AGCCACACTC GCTTTTCTAA TGTTAATGGG CGTTGCAGTC TATTTTAGAC TCTGGGCCAT
TCACTACAAC CTTTCTGCTG ATGACACTCA AATCATAAGG CAACAGTTTG ATATTGCTAA CAGGGAGGCA ATGGATGAAT
CTGCTGAGTG GAGGCTGAGG TACGATGAGG AGGTGGATAG GACGAAGAAG TGCTTGCAGG AGCTTCAAGT GTTTCAGGAG
TCCTCTCAGA AGGGGCAGAA TGCTTCTCAT ATTAACCATA AATTGGCAGT ACTGCAAAAG GAGAATGCAG TCTTACTTGA
AAGGTTGGAA GCATTGAAAA GAGAGCTTGA AGAGGAAAGG TTGAAGTGCA GTACACGATC CATGAAATAA TCATGAAAGT
GTTGACTAGA AGTATATTTT GTCTTTTTGT CCTTGGTGTT CAACCATGGA AGAATCTTGA CAGTATGATT TATGATCTCC
ACCTTACACA CACGGATCAT TCACGGAATA TGGAAATACG TGAGTCACAC TAATCATTCC TTCTTTATTT TTTTTAAGGG
GGTTACATTA TCCTGTGTAC CTTATTATGG ACAAATGTAT ATTTTTTTAA CCTCCATATG TACCTGATAA TTTCATATTT
TAATTTCTTT AAAGAACAAA TGTTCTGTGT ATGCTTAGAT TATGTGTTGT GGGTCACCAT CTAATTAATC CAGTCTGTCT
TTGCGAATTC A

>Vigan.08G276700.01
ATGATTGAAG CGAAGAGGAG TTCGATCTTA GCCACACTCG CTTTTCTAAT GTTAATGGGC GTTGCAGTCT ATTTTAGACT
CTGGGCCATT CACTACAACC TTTCTGCTGA TGACACTCAA ATCATAAGGC AACAGTTTGA TATTGCTAAC AGGGAGGCAA
TGGATGAATC TGCTGAGTGG AGGCTGAGGT ACGATGAGGA GGTGGATAGG ACGAAGAAGT GCTTGCAGGA GCTTCAAGTG
TTTCAGGAGT CCTCTCAGAA GGGGCAGAAT GCTTCTCATA TTAACCATAA ATTGGCAGTA CTGCAAAAGG AGAATGCAGT
CTTACTTGAA AGGTTGGAAG CATTGAAAAG AGAGCTTGAA GAGGAAAGGT TGAAGTGCAG TACACGATCC ATGAAATAA

>Vigan.08G276700.01
MIEAKRSSIL ATLAFLMLMG VAVYFRLWAI HYNLSADDTQ IIRQQFDIAN REAMDESAEW RLRYDEEVDR TKKCLQELQV
FQESSQKGQN ASHINHKLAV LQKENAVLLE RLEALKRELE EERLKCSTRS MK*