GBrowse Details

Vigan.08G280100.01

Basic Information:
Name: Vigan.08G280100.01
Multiple alignment
Variant Information
Position: Chr08:33304195..33312132 (+ strand)
Length: 7938
Functional Information:
Description: Similar to Uncharacterized protein. [C6ZS09, Glycine max]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: Phosphoesterase domain (IPR004843)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:47.83,20.74,14.89,14.30,26.39,18.75,13.03,11.21
Arabidopsis thaliana homolog: AT3G09970.1
Automatic updates:
Name: NM_001250808 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max calcineurin-like phosphoesterase (LOC100499649), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:33304195..33304318 (+ strand)
Length: 124
Type: five_prime_UTR
Position: Chr08:33304319..33304841 (+ strand)
Length: 523
Type: CDS
Position: Chr08:33311186..33311253 (+ strand)
Length: 68
Type: CDS
Position: Chr08:33311415..33311594 (+ strand)
Length: 180
Type: CDS
Position: Chr08:33311742..33311912 (+ strand)
Length: 171
Type: CDS
Position: Chr08:33311913..33312132 (+ strand)
Length: 220
Type: three_prime_UTR


>Vigan.08G280100.01
GTGATGCATT AAGAATCCGA ATTCCCTCCT CTAGCTTAAG ACACGTGCAT AAATCAAATT CTTCAAAACT GAAGCGACCA
AGTAGAACGC TTGGAACCAA ACCAAATCCT AGAAAATCGC ACCAATGTCA GAGCCTCCAA ACCCAAAACC CAGGCTCGTA
ATCTGCGTAG GCGACATCCA CGGCTTCGTA ACGAAGCTGA AAAATATATG GTCGAACCTC GAACGCAGCA TCGAACGATC
CGAATTCGAA ACTGCCACCG TAATCTTCCT CGGCGACTAC TGCGACCGCG GTCCCGACAC CCGCCTCGTC ATCGATTTCC
TCGTGGCATT GCCCTCCCGT TACCCGCGGC AGAAGCACGT CTTCCTTTCC GGCAACCATG ACCTGGCCTT CGCCGCCTTC
CTTCACCTCC TGCCGCCACC TCCTGACGGG TCGCCGTTCT CGGATGGGTG GAAGGAGTAC TCGGCGAGCG AGGATCGTGA
AGGGTGGTTC GGTGGTGAGG GGTTCGAGAA TATGCACCTG CAAGGTCGAA GGTGGAGTGG TAAGATAAAG GTTAAGTATA
ACACTGTCAA GGAGACGGAG TATCAAGGAT CAATTTACGA CGCTAGGCCA ACCTTTGAAT CCTATGGAGT TCCCCATGGT
TCCGCTGATT TGGTTAAGGC TGTTCCTGAT GAGCATAAGA AATTTCTGGC GGATTTGGTT TGGGTCCATG AAGAGGACGA
TGTCTTCATT AACACTGAAG ATGGAAGTAA ATGCTGCAAG TTGATTGCTG TTCATGCTGG TTTGGAGAAA AGAGTAGATG
TGAAAGAACA GTTACAACTT TTGAAAGCTC GAAATACTCG GGTGCCTAAG GTGGAGGCTC TAAGTGGGAG AAAGAGTGTG
TGGGATATTC CAGAGGAACT AAGTGCAAGT CCAACCATCA TTGTGAGTGG TCACCATGCG AAACTTCATA TAGAAGGCTT
AAGGCTGATC ATTGATGAAG GTGGCGGATT TAAAGATAAA CCAGTGGCTG CAATTATTCT TCCTTCACAG AAGATTATTC
GTGATACAGA TGTATTAGCA GAATAGTTTG ATACTCATGA GCATTTAGCG ATGAGATATT TTGTGTTGAT ATGAAATTTA
GGTGGTTAAT AAAGCATGGA ACTATTCCTT TTCCCAATGC TATGGATCTT AATCTTTCAC CTTTTATATG ACAAGTGCAA
TGTGAATGAC TTGTTTATTT GTGAATTGTT TAAGTTTGAC ATGTTAGTAT CAACTTTATT TTGCTGAATA AATAAGCTTT
AGTTAG

>Vigan.08G280100.01
ATGTCAGAGC CTCCAAACCC AAAACCCAGG CTCGTAATCT GCGTAGGCGA CATCCACGGC TTCGTAACGA AGCTGAAAAA
TATATGGTCG AACCTCGAAC GCAGCATCGA ACGATCCGAA TTCGAAACTG CCACCGTAAT CTTCCTCGGC GACTACTGCG
ACCGCGGTCC CGACACCCGC CTCGTCATCG ATTTCCTCGT GGCATTGCCC TCCCGTTACC CGCGGCAGAA GCACGTCTTC
CTTTCCGGCA ACCATGACCT GGCCTTCGCC GCCTTCCTTC ACCTCCTGCC GCCACCTCCT GACGGGTCGC CGTTCTCGGA
TGGGTGGAAG GAGTACTCGG CGAGCGAGGA TCGTGAAGGG TGGTTCGGTG GTGAGGGGTT CGAGAATATG CACCTGCAAG
GTCGAAGGTG GAGTGGTAAG ATAAAGGTTA AGTATAACAC TGTCAAGGAG ACGGAGTATC AAGGATCAAT TTACGACGCT
AGGCCAACCT TTGAATCCTA TGGAGTTCCC CATGGTTCCG CTGATTTGGT TAAGGCTGTT CCTGATGAGC ATAAGAAATT
TCTGGCGGAT TTGGTTTGGG TCCATGAAGA GGACGATGTC TTCATTAACA CTGAAGATGG AAGTAAATGC TGCAAGTTGA
TTGCTGTTCA TGCTGGTTTG GAGAAAAGAG TAGATGTGAA AGAACAGTTA CAACTTTTGA AAGCTCGAAA TACTCGGGTG
CCTAAGGTGG AGGCTCTAAG TGGGAGAAAG AGTGTGTGGG ATATTCCAGA GGAACTAAGT GCAAGTCCAA CCATCATTGT
GAGTGGTCAC CATGCGAAAC TTCATATAGA AGGCTTAAGG CTGATCATTG ATGAAGGTGG CGGATTTAAA GATAAACCAG
TGGCTGCAAT TATTCTTCCT TCACAGAAGA TTATTCGTGA TACAGATGTA TTAGCAGAAT AG

>Vigan.08G280100.01
MSEPPNPKPR LVICVGDIHG FVTKLKNIWS NLERSIERSE FETATVIFLG DYCDRGPDTR LVIDFLVALP SRYPRQKHVF
LSGNHDLAFA AFLHLLPPPP DGSPFSDGWK EYSASEDREG WFGGEGFENM HLQGRRWSGK IKVKYNTVKE TEYQGSIYDA
RPTFESYGVP HGSADLVKAV PDEHKKFLAD LVWVHEEDDV FINTEDGSKC CKLIAVHAGL EKRVDVKEQL QLLKARNTRV
PKVEALSGRK SVWDIPEELS ASPTIIVSGH HAKLHIEGLR LIIDEGGGFK DKPVAAIILP SQKIIRDTDV LAE*