GBrowse Details

Vigan.08G298400.01

Basic Information:
Name: Vigan.08G298400.01
Multiple alignment
Variant Information
Position: Chr08:37704208..37708145 (- strand)
Length: 3938
Functional Information:
Description: Similar to monodehydroascorbate reductase isoform 1. [XP_003535365.1, Glycine max]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
InterPro: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain (IPR001327)
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (IPR004099)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (IPR013027)
FAD/NAD-linked reductase, dimerisation domain (IPR016156)
Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:128.87,94.41,162.61,268.66,162.89,276.22,255.78,189.67
Arabidopsis thaliana homolog: AT3G09940.1, AT3G52880.2, AT5G03630.1
Automatic updates:
Name: NM_001309692 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum monodehydroascorbate reductase (LOC101489296), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:37704208..37704621 (- strand)
Length: 414
Type: three_prime_UTR
Position: Chr08:37704622..37704945 (- strand)
Length: 324
Type: CDS
Position: Chr08:37705090..37705230 (- strand)
Length: 141
Type: CDS
Position: Chr08:37705340..37705465 (- strand)
Length: 126
Type: CDS
Position: Chr08:37705554..37705672 (- strand)
Length: 119
Type: CDS
Position: Chr08:37705810..37706029 (- strand)
Length: 220
Type: CDS
Position: Chr08:37706103..37706221 (- strand)
Length: 119
Type: CDS
Position: Chr08:37706382..37706462 (- strand)
Length: 81
Type: CDS
Position: Chr08:37706722..37706773 (- strand)
Length: 52
Type: CDS
Position: Chr08:37707570..37707641 (- strand)
Length: 72
Type: CDS
Position: Chr08:37708024..37708071 (- strand)
Length: 48
Type: CDS
Position: Chr08:37708072..37708145 (- strand)
Length: 74
Type: five_prime_UTR


>Vigan.08G298400.01
GTTCATCTTT TCCTTACCAG TACCTCTCAT CTCAGACACT CAACAGAGCT TCCAGCGTTT GTAATTTCAC TTCGATGGCC
AAGACCTTCA AATACATCAT CGTCGGTGGA GGAGTTGCCG CTGGTTATGC GGCCAGGGAG TTTGCCAAAC AGGGAGTTAA
GCCAGGGGAG TTGGCTATCA TATCCAAGGA AGCGGTAGCA CCTTATGAAC GTCCTGCTCT GAGCAAGGCT TACCTTTTTC
CAGAGTCCCC TGCTAGACTT CCTGGGTTCC ATGTTTGTGT TGGAAGTGGA GGAGAAAGGT TGCTTCCTGA GTGGTACACT
GAGAAAGGGA TAGAGTTAAT TCTTAGTACT GAAATAGTTA AGGCAGACCT TGCTACAAAA TCACTGATCA GTGCCTCAGG
AGAAACATTC AGTTATCAGA CTTTGATTAT TGCAACTGGC TCAACAGTTA TAAGGCTGTC AGATTTTGGT GTGGAAGGAG
CTGATGCGAA AAACATCTTT TATTTGAGAG AGATTGACGA TGCTGACAAA TTGTACGAGG CAATCAAGGC AAAGAAGAAT
GGGAAAGCTG TGGTTGTTGG GGGAGGATAC ATTGGTCTGG AGCTTAGTGC AGTGTTGAAA CTCAACAATA TTGATGTTAC
CATGGTCTAC CCGGAGCCTT GGTGTATGCC ACGACTTTTT ACTGCTGATA TAGCTGAATT CTATGAGGGG TATTACGCAA
ATAAGGGCAT CAATATTATT AAAGGAACTG TTGCTGTTGG ATTCACTTCT AATTCCGATG GAGAGGTAAA AGAAGTCAAA
CTAAAGGATG GCCGAGTCCT GGAAGCTGAT ATTGTTGTTG TTGGCGTTGG AGGAAGGCCA CAAACAGCCT TATTCAAAGG
GCAGGTTGAA GAGGATAAGG CTGGAATTAA GACCGATTCC TTCTTCAAAA CTAATCTTTC CGACGTATAC GCTGTTGGTG
ATGTTGCCAC TTTCCCCTTG AAATTATACG GTGAATTGAG GAGAGTTGAA CACGTTGATC ATTCTCGAAA ATCAGCTGAA
CAGGCTGTGA AGGCCATCAA GGCAGCTGAG GATGGAAAAA CAGTTGAGGA GTATGATTAC CTTCCATACT TCTATTCCCG
TGCATTTGAT CTATCATGGC AATTCTATGG CGACAATGTT GGTGACACAG TGCTATTTGG AGACAACAAA CCAACGTCAG
CAAAGCCTAA GTTTGGGTCA TACTGGATTA AAGATGGGAA AGTTGTGGGG GCGTTTCTGG AGGGTGGAAC TCCTGAAGAA
AACAGTGCTA TTGCTAAAGT TGCTAGGGCC CAGCCTCCGG TTGCGGATAT AGACCAGCTT GCTAAGGAAG GCCTTTCCTT
TGCTAGTAAA ATATAATTGG TGTGTTAGGA AGGAAACGAT GCTTGGTGAT TTGCATAGAT TGTATTTGAA CTAGCTTCGG
TTTACCTTTG ATCATGTATT TCGGGAACTT TTTTCTTGTG TTTTTTTGTT TGAAATGTGA TTGCCAGGGA TATGTTTTAC
CGTATCTCTA TTTCTTTTCT CTTGCAACTT TCTGGCTCTG CATACGCTTT CCACACTCGA GAAGCAGCAG CTATTTGAAG
TGCAAGCCAC AAAGCAAAAC AAAAACGTAG AAATAAGATT TGGACAATGA TATTTTAACA ATTTTTTTTA ACAACTTTTT
GACAACATAT TATCAAATCA ATCACAATCT ATTACATAGA TTGTTGTAAA AAAGTTATCA AAAATAATTG TTAAAAAGAC
TTTTTCCATA AGATTTACAT GAATTGCTGG 

>Vigan.08G298400.01
ATGGCCAAGA CCTTCAAATA CATCATCGTC GGTGGAGGAG TTGCCGCTGG TTATGCGGCC AGGGAGTTTG CCAAACAGGG
AGTTAAGCCA GGGGAGTTGG CTATCATATC CAAGGAAGCG GTAGCACCTT ATGAACGTCC TGCTCTGAGC AAGGCTTACC
TTTTTCCAGA GTCCCCTGCT AGACTTCCTG GGTTCCATGT TTGTGTTGGA AGTGGAGGAG AAAGGTTGCT TCCTGAGTGG
TACACTGAGA AAGGGATAGA GTTAATTCTT AGTACTGAAA TAGTTAAGGC AGACCTTGCT ACAAAATCAC TGATCAGTGC
CTCAGGAGAA ACATTCAGTT ATCAGACTTT GATTATTGCA ACTGGCTCAA CAGTTATAAG GCTGTCAGAT TTTGGTGTGG
AAGGAGCTGA TGCGAAAAAC ATCTTTTATT TGAGAGAGAT TGACGATGCT GACAAATTGT ACGAGGCAAT CAAGGCAAAG
AAGAATGGGA AAGCTGTGGT TGTTGGGGGA GGATACATTG GTCTGGAGCT TAGTGCAGTG TTGAAACTCA ACAATATTGA
TGTTACCATG GTCTACCCGG AGCCTTGGTG TATGCCACGA CTTTTTACTG CTGATATAGC TGAATTCTAT GAGGGGTATT
ACGCAAATAA GGGCATCAAT ATTATTAAAG GAACTGTTGC TGTTGGATTC ACTTCTAATT CCGATGGAGA GGTAAAAGAA
GTCAAACTAA AGGATGGCCG AGTCCTGGAA GCTGATATTG TTGTTGTTGG CGTTGGAGGA AGGCCACAAA CAGCCTTATT
CAAAGGGCAG GTTGAAGAGG ATAAGGCTGG AATTAAGACC GATTCCTTCT TCAAAACTAA TCTTTCCGAC GTATACGCTG
TTGGTGATGT TGCCACTTTC CCCTTGAAAT TATACGGTGA ATTGAGGAGA GTTGAACACG TTGATCATTC TCGAAAATCA
GCTGAACAGG CTGTGAAGGC CATCAAGGCA GCTGAGGATG GAAAAACAGT TGAGGAGTAT GATTACCTTC CATACTTCTA
TTCCCGTGCA TTTGATCTAT CATGGCAATT CTATGGCGAC AATGTTGGTG ACACAGTGCT ATTTGGAGAC AACAAACCAA
CGTCAGCAAA GCCTAAGTTT GGGTCATACT GGATTAAAGA TGGGAAAGTT GTGGGGGCGT TTCTGGAGGG TGGAACTCCT
GAAGAAAACA GTGCTATTGC TAAAGTTGCT AGGGCCCAGC CTCCGGTTGC GGATATAGAC CAGCTTGCTA AGGAAGGCCT
TTCCTTTGCT AGTAAAATAT AA

>Vigan.08G298400.01
MAKTFKYIIV GGGVAAGYAA REFAKQGVKP GELAIISKEA VAPYERPALS KAYLFPESPA RLPGFHVCVG SGGERLLPEW
YTEKGIELIL STEIVKADLA TKSLISASGE TFSYQTLIIA TGSTVIRLSD FGVEGADAKN IFYLREIDDA DKLYEAIKAK
KNGKAVVVGG GYIGLELSAV LKLNNIDVTM VYPEPWCMPR LFTADIAEFY EGYYANKGIN IIKGTVAVGF TSNSDGEVKE
VKLKDGRVLE ADIVVVGVGG RPQTALFKGQ VEEDKAGIKT DSFFKTNLSD VYAVGDVATF PLKLYGELRR VEHVDHSRKS
AEQAVKAIKA AEDGKTVEEY DYLPYFYSRA FDLSWQFYGD NVGDTVLFGD NKPTSAKPKF GSYWIKDGKV VGAFLEGGTP
EENSAIAKVA RAQPPVADID QLAKEGLSFA SKI*