GBrowse Details

Vigan.08G303700.01

Basic Information:
Name: Vigan.08G303700.01
Multiple alignment
Variant Information
Position: Chr08:38643694..38646168 (+ strand)
Length: 2475
Functional Information:
Description: Similar to Uncharacterized protein. [I1NED2, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: transferase activity, transferring acyl groups (GO:0016746)
InterPro: Phospholipid/glycerol acyltransferase (IPR002123)
HAD-like domain (IPR023214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.00,9.48,0.00,0.00,0.00,0.00,0.00
Arabidopsis thaliana homolog: AT1G01610.1, AT2G38110.1, AT4G00400.1
Automatic updates:
Name: KX774513 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula cultivar A17 RAM2 (RAM2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001405048 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula glycerol-3-phosphate acyltransferase RAM2-like (LOC11425164), mRNA.
PubMed ID: 31837401 NCBI(pubmed)
23122843 NCBI(pubmed)
12744459 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:38643694..38644112 (+ strand)
Length: 419
Type: five_prime_UTR
Position: Chr08:38644113..38644343 (+ strand)
Length: 231
Type: CDS
Position: Chr08:38644618..38644998 (+ strand)
Length: 381
Type: CDS
Position: Chr08:38645096..38646010 (+ strand)
Length: 915
Type: CDS
Position: Chr08:38646011..38646168 (+ strand)
Length: 158
Type: three_prime_UTR


>Vigan.08G303700.01
AATTTTTCTA GGCCTTTGAG TACTCAGATC CACTTAAAGA ACCTCTTCAA ATGAAAACAA ACATTTGAAT AAGCTATGTG
AATTGCAATG GGAAGTGAAG ATGGAAGACA AAACGTGACG GAGCAAACCA GGCACGAAAA CCTTACTTTA CCACCTTCTC
TTACCTTTCC AAAAACAAGA ATCGCAAACC CTCGTTTGTA TCGCACCTTT TACATCAATC AATTTCAATC GCTTTTGGAA
ATCTCGGAGC CACCATTGTC ATCGTTCACA TAGTCATTCA TACCAAACCA AAACTTGTCT CACATATCCC CTAGCTATGT
GACTAAGCGT ACATATATAT GCACCCACAG AACAAAAAAA CATGCACCAA ACCAATTAGT CTCCACCAAC GTTGATTTGC
TTGGTGGGTC TAGCAAAGCA TGGCTTTTTC AACATTCCCA AGTGTGAGTA AGTGCTCCTC CATCGGTAGG GAAAAAGACA
CTGTGGTTGC AGACATGGAT GGAACCTTAC TCATAGGTCG AAGCTCTTTC CCTTATTTTG CTCTTGTGGC CTTTGAAGCT
GGTGGGATCC TTCGGCTTTT GTTCTTTGTC TTGGCTTCTC CTATTGCTGC CCTTCTCTAC TACTTCATCT CTGAATCCGC
TGGTATTCAG GTTCTGATAT TTGCTGCAAT GGCGGGGATG AAGGTGTCGA GCATAGAATC AGTGGCGCGA GCGGTGCTTC
CGAAGTTCTA CGCGGATGAC GTTCACCCGG AGACGTGGCG GGTGTTCTCG TCGTGCGGGA AGCGGTGCGT GCTGACGGCG
AATCCGAGAG TGATGGTGGA ACCTTTCTTG AAGGAGTTTT TAGGTGCAGA CGTGGTTCTG GGCACTGAGA TCAGAACTTT
CAAGGGAAGA GCAACTGGGC TGGTGAGCAG GCCTGGGATA CTTGTTGGCA ACAAGAAAGC TGAGGCCCTC CTCAACACTT
TTGGAGATGA GAGACCAAAT GTTGGACTTG GTGATAGACA AACCGATGCT CCCTTCATGG CTTTGTGCAA GGAGGGTTAC
ATAGTCCCAC CCAAAAGTGA CGTGAAATCA GTTTCTACAG ACAAGCTTCC AAAGCCCATA ATCTTCCACG ATGGAAGACT
GGTGCAGAAA CCAACACCCC TCATTGCACT ACTCACCATT CTCTGGATCC CCGTAGGGTT CCCCTTAGCA TGCCTTCGAA
TTGCTGCAGG TTCCCTTCTG CCAATGCAAA TGGTCTACTA TGCCTTCTGG GCCCTAGGAG TTCGTGTCAT AATCAAGGGC
AACCCAACCC CAAAACTCAC AAAATCAAAC CCTGATCCTA ACACTTCCGG AGTTCTCTTT ATCTGCTCCC ACCGTACCCT
CCTCGACCCC ATCTTCCTCT CCGCCGCCCT CGGCCGCCCC ATCCCTGCCG TCACCTACTC CGTCTCCCGC CTCTCGGAGA
TAATCTCCCC CATCAAAACC GTCCGCCTCA GCCGCGACCG CGCCACCGAT GCCGCCATGA TAAAGAAGCT CCTCCAAGAG
GGTGACCTAG CAATCTGCCC AGAAGGCACA ACCTGCAGAG AGCCCTTCCT CCTTCGATTC TCCGCCCTGT TCGCGGAACT
CACCGACGAG CTCGTCCCCG TGGCCATGGT GAACCGTATG AGCATGTTCC ACGGCACAAC AGCAAGAGGG TGGAAGGGAA
TGGACCCGTT TTACTTCTTC ATGAACCCTA GTCCCGCTTA CGAAGTTACG TTCTTGAACA AATTGCCGAA AGAGTTGACT
TGTGGGTCAG GGAACAAGTC GAGCCATGAT GTTGCGAATT ACATACAGAG GGTGATTGCA TCGACATTGT CGTATGAGTG
CACTGGGTTT ACGAGGAAGG ATAAGTACAG GGCACTTGCG GGGAATGATG GGGTTGTGGT GGAGAAGGCT CATGTTGCTA
AGGCTAACAA AGTCATGGGT TGTTAAATTT AGGTTGTCGT TTTTTCTTCT ATGGTTTTGT AATGTTCATG GACTTTTTTT
TTTTTTTTTC AATTTCTTGC TTTGAAAGTG ACGGAGAAAT GAAAAAAAGA AAATGATATT CAACACAGAT ATGTTTCAGA
AATAAATGGA ATGATTTATA GGAA

>Vigan.08G303700.01
ATGGCTTTTT CAACATTCCC AAGTGTGAGT AAGTGCTCCT CCATCGGTAG GGAAAAAGAC ACTGTGGTTG CAGACATGGA
TGGAACCTTA CTCATAGGTC GAAGCTCTTT CCCTTATTTT GCTCTTGTGG CCTTTGAAGC TGGTGGGATC CTTCGGCTTT
TGTTCTTTGT CTTGGCTTCT CCTATTGCTG CCCTTCTCTA CTACTTCATC TCTGAATCCG CTGGTATTCA GGTTCTGATA
TTTGCTGCAA TGGCGGGGAT GAAGGTGTCG AGCATAGAAT CAGTGGCGCG AGCGGTGCTT CCGAAGTTCT ACGCGGATGA
CGTTCACCCG GAGACGTGGC GGGTGTTCTC GTCGTGCGGG AAGCGGTGCG TGCTGACGGC GAATCCGAGA GTGATGGTGG
AACCTTTCTT GAAGGAGTTT TTAGGTGCAG ACGTGGTTCT GGGCACTGAG ATCAGAACTT TCAAGGGAAG AGCAACTGGG
CTGGTGAGCA GGCCTGGGAT ACTTGTTGGC AACAAGAAAG CTGAGGCCCT CCTCAACACT TTTGGAGATG AGAGACCAAA
TGTTGGACTT GGTGATAGAC AAACCGATGC TCCCTTCATG GCTTTGTGCA AGGAGGGTTA CATAGTCCCA CCCAAAAGTG
ACGTGAAATC AGTTTCTACA GACAAGCTTC CAAAGCCCAT AATCTTCCAC GATGGAAGAC TGGTGCAGAA ACCAACACCC
CTCATTGCAC TACTCACCAT TCTCTGGATC CCCGTAGGGT TCCCCTTAGC ATGCCTTCGA ATTGCTGCAG GTTCCCTTCT
GCCAATGCAA ATGGTCTACT ATGCCTTCTG GGCCCTAGGA GTTCGTGTCA TAATCAAGGG CAACCCAACC CCAAAACTCA
CAAAATCAAA CCCTGATCCT AACACTTCCG GAGTTCTCTT TATCTGCTCC CACCGTACCC TCCTCGACCC CATCTTCCTC
TCCGCCGCCC TCGGCCGCCC CATCCCTGCC GTCACCTACT CCGTCTCCCG CCTCTCGGAG ATAATCTCCC CCATCAAAAC
CGTCCGCCTC AGCCGCGACC GCGCCACCGA TGCCGCCATG ATAAAGAAGC TCCTCCAAGA GGGTGACCTA GCAATCTGCC
CAGAAGGCAC AACCTGCAGA GAGCCCTTCC TCCTTCGATT CTCCGCCCTG TTCGCGGAAC TCACCGACGA GCTCGTCCCC
GTGGCCATGG TGAACCGTAT GAGCATGTTC CACGGCACAA CAGCAAGAGG GTGGAAGGGA ATGGACCCGT TTTACTTCTT
CATGAACCCT AGTCCCGCTT ACGAAGTTAC GTTCTTGAAC AAATTGCCGA AAGAGTTGAC TTGTGGGTCA GGGAACAAGT
CGAGCCATGA TGTTGCGAAT TACATACAGA GGGTGATTGC ATCGACATTG TCGTATGAGT GCACTGGGTT TACGAGGAAG
GATAAGTACA GGGCACTTGC GGGGAATGAT GGGGTTGTGG TGGAGAAGGC TCATGTTGCT AAGGCTAACA AAGTCATGGG
TTGTTAA

>Vigan.08G303700.01
MAFSTFPSVS KCSSIGREKD TVVADMDGTL LIGRSSFPYF ALVAFEAGGI LRLLFFVLAS PIAALLYYFI SESAGIQVLI
FAAMAGMKVS SIESVARAVL PKFYADDVHP ETWRVFSSCG KRCVLTANPR VMVEPFLKEF LGADVVLGTE IRTFKGRATG
LVSRPGILVG NKKAEALLNT FGDERPNVGL GDRQTDAPFM ALCKEGYIVP PKSDVKSVST DKLPKPIIFH DGRLVQKPTP
LIALLTILWI PVGFPLACLR IAAGSLLPMQ MVYYAFWALG VRVIIKGNPT PKLTKSNPDP NTSGVLFICS HRTLLDPIFL
SAALGRPIPA VTYSVSRLSE IISPIKTVRL SRDRATDAAM IKKLLQEGDL AICPEGTTCR EPFLLRFSAL FAELTDELVP
VAMVNRMSMF HGTTARGWKG MDPFYFFMNP SPAYEVTFLN KLPKELTCGS GNKSSHDVAN YIQRVIASTL SYECTGFTRK
DKYRALAGND GVVVEKAHVA KANKVMGC*