GBrowse Details

Vigan.08G322700.01

Basic Information:
Name: Vigan.08G322700.01
Multiple alignment
Variant Information
Position: Chr08:41586061..41591050 (+ strand)
Length: 4990
Functional Information:
Description: Similar to L-galactono-1,4-lactone dehydrogenase, mitochondrial-like. [XP_003535902.1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Cellular Component: membrane (GO:0016020)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: D-arabinono-1,4-lactone oxidase activity (GO:0003885)
Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614)
Molecular Function: galactonolactone dehydrogenase activity (GO:0016633)
Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor (GO:0016899)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
InterPro: FAD linked oxidase, N-terminal (IPR006094)
D-arabinono-1,4-lactone oxidase (IPR007173)
Galactonolactone dehydrogenase (IPR010029)
FAD-binding, type 2 (IPR016166)
FAD-binding, type 2, subdomain 1 (IPR016167)
CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (IPR016169)
L-gulonolactone/D-arabinono-1,4-lactone oxidase (IPR023595)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.60,33.25,10.25,13.49,12.21,16.08,17.03,12.38
Arabidopsis thaliana homolog: AT3G47930.1
Structure :
Position: Chr08:41586061..41586137 (+ strand)
Length: 77
Type: five_prime_UTR
Position: Chr08:41586138..41586737 (+ strand)
Length: 600
Type: CDS
Position: Chr08:41587397..41587647 (+ strand)
Length: 251
Type: CDS
Position: Chr08:41588134..41588319 (+ strand)
Length: 186
Type: CDS
Position: Chr08:41588845..41589259 (+ strand)
Length: 415
Type: CDS
Position: Chr08:41590061..41590201 (+ strand)
Length: 141
Type: CDS
Position: Chr08:41590369..41590527 (+ strand)
Length: 159
Type: CDS
Position: Chr08:41590528..41591050 (+ strand)
Length: 523
Type: three_prime_UTR


>Vigan.08G322700.01
TTTAGTAGAA TTTTAAAATG GATAATTAAC TCAAATTCCA TCACTTCTCT GTTTGCTCAT CATAGTTGAG CGCAGACATG
CTGAGAACAC TAGTTCTGAA GCGCACCGTC GCTCTCACTC GCCAACATTC GCACTCCGTG CTCTTCCGCC GATTTTCGGC
GGCGCCGGAA CCCGCCTCCT CCGCCGATGC AGAAACCCGC AAGTACGCGG GCTACGCGGC GCTGCTCCTC TTCTGCGGTG
CCGCCACCTA TTACAGCTTC CCCCTGCCGG ACGATGCCAA GCACAAGAAG GCGCAGATCT TCCGGTACGC GCCGTTGCCG
GAGGACCTGC ACACGGTGTC GAACTGGAGC GGGACGCACG AGGTGCACAC TCGCAACTTC TTCCAGCCGG AGAACGTGGA
ACAGCTGGAG CGCGTGGTGA GGGAGGCGAA CGAGAAGAGA GCCCGAATCC GTCCGGTCGG GTCGGGGCTG TCGCCGAACG
GGATTGGGCT TTCGAGGGTC GGAATGGTGA ACTTGGCGCT GATGGATGGG ATATTGGAAG TGGACAAGCA GAGTAAGACT
GTGAGGGTGC AGGCCGGGAT CAGAGTGCAG CAGCTTGTGG ATGGACTCAA GGACCACGGT CTTACCTTGC AGAATTTTGC
TTCCATTAGG GAGCAACAAA TTGGTGGCAT CATTCAGGTT GGTGCACATG GCACCGGTGC AAAGTTGCCT CCTATTGATG
AACAAGTGAT TGCCATGAAA TTGGTCACCC CTGCCAAAGG GACTATAGAA ATATCGAAAG ATAAAGATCC TGAGCTGTTT
TATCTTGCTC GATGTGGTCT TGGAGGACTT GGAGTTGTGG CTGAAGTCAC CCTTCAATGT GTTGATCGAC AGGAGCTTGT
GGAGCACACA TTTGTCTCAA CCATGAAGGA GATAAAGAGA AATCACAAGA AATTGTTGTC TGACAATAAG CATGTGAAGT
ACCTTTATAT CCCTTACACC GACACTGTTG TGGTTGTGCG GTGCAATCCT GTTTCAAAGT GGAAAGGTCC TCCCAAGTTT
AAACCACAGT ATACTAAAGA TGAAGCCATA CAGCATGTGC GTGACCTTTA CAGGGAGTCC CTCCAGAAAT ATGGAAGAGG
AGGATCTAGG GGTGAATCAG CAGAAGAACA AAAAATAGAT GAACTTTCTT TCACAGAATT AAGAGATAAA CTAATTGCCC
TGGATCCTCT CAATAAAAAG CACATCATCA GCATTAATCA AGCTGAGGCC GAGTTCTGGC GGAAGTCAGA AGGTTACAGG
GTTGGATGGA GTGATGAAAT ATTGGGCTTT GATTGTGGAG GCCAACAGTG GGTATCGGAG ACATGTTTCC CAGCTGGAAA
ACTAGCTAAT CCAAGCATGA AAGACCTTGA ATACATTGAA GAGCTGAAGC AACTTATAGA GAATGAAGAG ATACCTGCAC
CTGCTCCAAT TGAGCAACGT TGGACAGCGA GCAGTAGGAG TCCCTTGAGT CCTGCTTCAA GCCCATCTGA GGATGATATA
TTTTCTTGGG TGGGTATAAT CATGTACCTC CCTACCATGG ATGCTCGGCA GAGGAAGGAT ATAACAGAAG AATTCTTTCA
TTACAGGCAT CTGACTCAGG CGACATTATG GGATCGTTAC TCTGCATTTG AACACTGGGC TAAGATTGAG GTTCCAAAGG
ATAAGGAGGA ACTTGCAGCT CTCCAAGCAA GGCTAAGAAA GAGGTTTCCT GTGGATTCAT ACAATAAAGC AAGAAAGGAC
CTGGACCCCA ATAGGATCCT TTCAAATAAC ATGTTGGAAA AGCTCTTCGC GCAATCACAC ACCATATAAA TTCTGGGTTG
GTTATTTGTC TAAATTGTCC ATATTTTTCA CGTCGATTAC ACATTCAACC TTGATTTCTT GTCTGCAGTC ACATACATGT
TGGAACTTCG AGATGCAAAA TATCTGGTGC ACAATCTGGA CTATTATGCA TATTCAATTT TTCAGTTTAT TGCCTGCCTG
CCAGATGCAT TGGACTCGGA AGCTTAAAGA ATTGTGATGT ATGTACATAT AGAGGTGCTG AAAGAGGAAG CATAGAGAAA
GGGTGCTGGG GGGAACTGGA GGAGAAAATA TTTTGATATA GTTGTATGAA TTGCTGCCTG ATAAGCGTCA ATCATGGCCA
TCATACTTCA TTTTTTTGCG TTCAATTGTT ATTCCACAAC TTGTTTGAGA TTTCTAAAAA CATTTTTCTT GTCATGATAA
ACATCGGATG CAAGACCTTT CGAAAGAAAT AATGGGGATT ACTCCAATTG GTATCCATAT TTTTTTCTCA AGATATTAGT
ACCTTGGGTA TCAAACATAT ACTGTTTATT AA

>Vigan.08G322700.01
ATGCTGAGAA CACTAGTTCT GAAGCGCACC GTCGCTCTCA CTCGCCAACA TTCGCACTCC GTGCTCTTCC GCCGATTTTC
GGCGGCGCCG GAACCCGCCT CCTCCGCCGA TGCAGAAACC CGCAAGTACG CGGGCTACGC GGCGCTGCTC CTCTTCTGCG
GTGCCGCCAC CTATTACAGC TTCCCCCTGC CGGACGATGC CAAGCACAAG AAGGCGCAGA TCTTCCGGTA CGCGCCGTTG
CCGGAGGACC TGCACACGGT GTCGAACTGG AGCGGGACGC ACGAGGTGCA CACTCGCAAC TTCTTCCAGC CGGAGAACGT
GGAACAGCTG GAGCGCGTGG TGAGGGAGGC GAACGAGAAG AGAGCCCGAA TCCGTCCGGT CGGGTCGGGG CTGTCGCCGA
ACGGGATTGG GCTTTCGAGG GTCGGAATGG TGAACTTGGC GCTGATGGAT GGGATATTGG AAGTGGACAA GCAGAGTAAG
ACTGTGAGGG TGCAGGCCGG GATCAGAGTG CAGCAGCTTG TGGATGGACT CAAGGACCAC GGTCTTACCT TGCAGAATTT
TGCTTCCATT AGGGAGCAAC AAATTGGTGG CATCATTCAG GTTGGTGCAC ATGGCACCGG TGCAAAGTTG CCTCCTATTG
ATGAACAAGT GATTGCCATG AAATTGGTCA CCCCTGCCAA AGGGACTATA GAAATATCGA AAGATAAAGA TCCTGAGCTG
TTTTATCTTG CTCGATGTGG TCTTGGAGGA CTTGGAGTTG TGGCTGAAGT CACCCTTCAA TGTGTTGATC GACAGGAGCT
TGTGGAGCAC ACATTTGTCT CAACCATGAA GGAGATAAAG AGAAATCACA AGAAATTGTT GTCTGACAAT AAGCATGTGA
AGTACCTTTA TATCCCTTAC ACCGACACTG TTGTGGTTGT GCGGTGCAAT CCTGTTTCAA AGTGGAAAGG TCCTCCCAAG
TTTAAACCAC AGTATACTAA AGATGAAGCC ATACAGCATG TGCGTGACCT TTACAGGGAG TCCCTCCAGA AATATGGAAG
AGGAGGATCT AGGGGTGAAT CAGCAGAAGA ACAAAAAATA GATGAACTTT CTTTCACAGA ATTAAGAGAT AAACTAATTG
CCCTGGATCC TCTCAATAAA AAGCACATCA TCAGCATTAA TCAAGCTGAG GCCGAGTTCT GGCGGAAGTC AGAAGGTTAC
AGGGTTGGAT GGAGTGATGA AATATTGGGC TTTGATTGTG GAGGCCAACA GTGGGTATCG GAGACATGTT TCCCAGCTGG
AAAACTAGCT AATCCAAGCA TGAAAGACCT TGAATACATT GAAGAGCTGA AGCAACTTAT AGAGAATGAA GAGATACCTG
CACCTGCTCC AATTGAGCAA CGTTGGACAG CGAGCAGTAG GAGTCCCTTG AGTCCTGCTT CAAGCCCATC TGAGGATGAT
ATATTTTCTT GGGTGGGTAT AATCATGTAC CTCCCTACCA TGGATGCTCG GCAGAGGAAG GATATAACAG AAGAATTCTT
TCATTACAGG CATCTGACTC AGGCGACATT ATGGGATCGT TACTCTGCAT TTGAACACTG GGCTAAGATT GAGGTTCCAA
AGGATAAGGA GGAACTTGCA GCTCTCCAAG CAAGGCTAAG AAAGAGGTTT CCTGTGGATT CATACAATAA AGCAAGAAAG
GACCTGGACC CCAATAGGAT CCTTTCAAAT AACATGTTGG AAAAGCTCTT CGCGCAATCA CACACCATAT AA

>Vigan.08G322700.01
MLRTLVLKRT VALTRQHSHS VLFRRFSAAP EPASSADAET RKYAGYAALL LFCGAATYYS FPLPDDAKHK KAQIFRYAPL
PEDLHTVSNW SGTHEVHTRN FFQPENVEQL ERVVREANEK RARIRPVGSG LSPNGIGLSR VGMVNLALMD GILEVDKQSK
TVRVQAGIRV QQLVDGLKDH GLTLQNFASI REQQIGGIIQ VGAHGTGAKL PPIDEQVIAM KLVTPAKGTI EISKDKDPEL
FYLARCGLGG LGVVAEVTLQ CVDRQELVEH TFVSTMKEIK RNHKKLLSDN KHVKYLYIPY TDTVVVVRCN PVSKWKGPPK
FKPQYTKDEA IQHVRDLYRE SLQKYGRGGS RGESAEEQKI DELSFTELRD KLIALDPLNK KHIISINQAE AEFWRKSEGY
RVGWSDEILG FDCGGQQWVS ETCFPAGKLA NPSMKDLEYI EELKQLIENE EIPAPAPIEQ RWTASSRSPL SPASSPSEDD
IFSWVGIIMY LPTMDARQRK DITEEFFHYR HLTQATLWDR YSAFEHWAKI EVPKDKEELA ALQARLRKRF PVDSYNKARK
DLDPNRILSN NMLEKLFAQS HTI*