GBrowse Details

Vigan.08G329300.01

Basic Information:
Name: Vigan.08G329300.01
Multiple alignment
Variant Information
Position: Chr08:42500025..42511856 (+ strand)
Length: 11832
Functional Information:
Description: Similar to protein N-terminal glutamine amidohydrolase-like. [XP_004513858.1, Cicer arietinum]
GO: Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811)
InterPro: Protein N-terminal glutamine amidohydrolase, alpha beta roll (IPR023128)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.01,5.72,12.36,12.94,22.11,21.57,18.24,16.85
Arabidopsis thaliana homolog: AT2G41760.1
Automatic updates:
Name: NM_001254441 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein N-terminal glutamine amidohydrolase-like (LOC100806607), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:42500025..42500220 (+ strand)
Length: 196
Type: five_prime_UTR
Position: Chr08:42500221..42500273 (+ strand)
Length: 53
Type: CDS
Position: Chr08:42500614..42500719 (+ strand)
Length: 106
Type: CDS
Position: Chr08:42501271..42501348 (+ strand)
Length: 78
Type: CDS
Position: Chr08:42501484..42501611 (+ strand)
Length: 128
Type: CDS
Position: Chr08:42510976..42511100 (+ strand)
Length: 125
Type: CDS
Position: Chr08:42511464..42511630 (+ strand)
Length: 167
Type: CDS
Position: Chr08:42511631..42511856 (+ strand)
Length: 226
Type: three_prime_UTR


>Vigan.08G329300.01
TTAAAATTAT CAGAAATGTA TTAGTAAAAG ATTATAAAAA AGCATATAGT ATTCTTTTCT TACTCAACCT CGTATCATGT
AATGTATGTG CTGGTTTGGG TTTTGGGTTT TGTTGGCAGC AAACCTATAT CTTGGATCCC ATCAGGTTGG AACCTACACA
AAGGTTGTTG GTAACCGGTG AGTGTTGAAG AGAACGATGG CAACGTCAAC TATGGATGTT CTTCATTTCC AGCACACCCC
TTTTTACTGT GAGGAGAATG TATACTTGCT TTGCAAGAAG TTGTGCAGTG ATGGAATAGC AAAAGCTGAT GGATCTGATC
TTTTTGTTGT ATTCATTTCC AATGAAAAGA AACAGATCCC ACTATGGAAT CAAAAGGCTA GCAAAAGAGC TGATGGGGTG
ATTCTTTGGG ATTATCATGT AATTTGCATT CAGATAAAAC AAGGAAATAT CCCTCCACTT GTATGGGACT TAGATTCAAC
CCTTCCTTTT CCTTCACCTC TACCCTTATA CGTGTCTGAA ACTATACGAC CATCTTTTCA ACTTTTTTCT GATTATAACA
GATTATTCCG AGTTGTGCAT GCTCCACTAT TTCTTCGTAG TTTTGCATCT GATAGAAGAC ATATGAAAGA TTCTGGTGGA
AAGTGGATTG AAGAACCTCC TTCACATGAG CCTATAGTTG CAGAAGATGG AACATTGCAC AACCTGAATG AATACATTAA
CATATCTGTC GCTGATGCTA TCACTGATGT TACTATCAGT TCAGTCAAAG ATGTAATTTT TACCCAGAAA AATGGTGTGG
TGATAAAGGC TAATCAGCTT GTGGAATTCA TCTGTCAGTT ATCTTTAGAA TAGCCCCATT CATATGGCTC CCCTGGTTTG
TATATGTTCA GCTGCTATAC AAGATACTGT CAAATATTGT CTCCCTTTTA ATGGTTGTTG TAAAAATTCT TCTTTTGAAG
GTATCTTTTT GAGAGTGGTG TGCAAGGAAT GCAAGTTTAA GCTACATTTT TTACTGTAAT TCTTCAATAC TATCCGTGGT
TTATTACTAT ATGGTATGAA GAATGTTTCG TAATCTGAA

>Vigan.08G329300.01
ATGGCAACGT CAACTATGGA TGTTCTTCAT TTCCAGCACA CCCCTTTTTA CTGTGAGGAG AATGTATACT TGCTTTGCAA
GAAGTTGTGC AGTGATGGAA TAGCAAAAGC TGATGGATCT GATCTTTTTG TTGTATTCAT TTCCAATGAA AAGAAACAGA
TCCCACTATG GAATCAAAAG GCTAGCAAAA GAGCTGATGG GGTGATTCTT TGGGATTATC ATGTAATTTG CATTCAGATA
AAACAAGGAA ATATCCCTCC ACTTGTATGG GACTTAGATT CAACCCTTCC TTTTCCTTCA CCTCTACCCT TATACGTGTC
TGAAACTATA CGACCATCTT TTCAACTTTT TTCTGATTAT AACAGATTAT TCCGAGTTGT GCATGCTCCA CTATTTCTTC
GTAGTTTTGC ATCTGATAGA AGACATATGA AAGATTCTGG TGGAAAGTGG ATTGAAGAAC CTCCTTCACA TGAGCCTATA
GTTGCAGAAG ATGGAACATT GCACAACCTG AATGAATACA TTAACATATC TGTCGCTGAT GCTATCACTG ATGTTACTAT
CAGTTCAGTC AAAGATGTAA TTTTTACCCA GAAAAATGGT GTGGTGATAA AGGCTAATCA GCTTGTGGAA TTCATCTGTC
AGTTATCTTT AGAATAG

>Vigan.08G329300.01
MATSTMDVLH FQHTPFYCEE NVYLLCKKLC SDGIAKADGS DLFVVFISNE KKQIPLWNQK ASKRADGVIL WDYHVICIQI
KQGNIPPLVW DLDSTLPFPS PLPLYVSETI RPSFQLFSDY NRLFRVVHAP LFLRSFASDR RHMKDSGGKW IEEPPSHEPI
VAEDGTLHNL NEYINISVAD AITDVTISSV KDVIFTQKNG VVIKANQLVE FICQLSLE*