GBrowse Details

Vigan.08G360200.01

Basic Information:
Name: Vigan.08G360200.01
Multiple alignment
Variant Information
Position: Chr08:45932193..45934921 (+ strand)
Length: 2729
Functional Information:
Description: Similar to Phosphate transporter. [A4ZVI6, Phaseolus vulgaris]
GO: Biological Process: phosphate ion transport (GO:0006817)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315)
Molecular Function: transmembrane transporter activity (GO:0022857)
InterPro: Phosphate permease (IPR004738)
General substrate transporter (IPR005828)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Major facilitator superfamily domain (IPR020846)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.45,0.01,0.17,0.01,11.53,1.92,414.90,0.03
Arabidopsis thaliana homolog: AT2G32830.1, AT2G38940.1, AT3G54700.1, AT5G43340.1, AT5G43350.1, AT5G43360.1, AT5G43370.1
Automatic updates:
Name: NM_001254235 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic phosphate transporter 1-14 (PHT1-14), mRNA.
PubMed ID: 23510338 NCBI(pubmed)
22313769 NCBI(pubmed)
Status: Known Variant
Name: NM_001354467 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic phosphate transporter 1-3 (PHT1-3), mRNA.
PubMed ID: 23510338 NCBI(pubmed)
23133521 NCBI(pubmed)
22313769 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:45932193..45932962 (+ strand)
Length: 770
Type: five_prime_UTR
Position: Chr08:45932963..45933979 (+ strand)
Length: 1017
Type: CDS
Position: Chr08:45934057..45934650 (+ strand)
Length: 594
Type: CDS
Position: Chr08:45934651..45934921 (+ strand)
Length: 271
Type: three_prime_UTR


>Vigan.08G360200.01
TGAAGCTTCA TTCAATGCCA TGCCATATTC TTAAACCTTA CAAAGTACTT CTTCTACTCC TTCAGTCTGG TTTGGCAAGC
TGGTTTGTGT TCTCTCTCTA TCCCTCTTGG TTTGGTTTGA AAATTCTTCT GTTTTTTTTC TTTCATGTAA GGAAAGAGTT
TTCCTATAGC AAAAATATGT GTGATTTTGA GATCATTCTG ATATATTTCT GCATGATATG CAGTCACCAA ATTTTCAATG
GATGAAACTT GTCTGTGTGT AATATTAAAA TTTCTGCATC CACAACACAA TATTTTGGTC TCTGGACCTT CATCAGAGAC
ATTAGCTACA CCTGCATGCT ACAGTATATT TAGTTAGAAA TGATACAAAT GTATGAAAAC AAAAGATCCT TTTGACTGTA
TCTTCAATTC ATTGCTTTTA ATGAGCATAA AAAAATTTAA TAAAAAAACC TTCTTTCAAA ATATATCTAG TTCTTTATCC
AACATAAAAT AGTTGGCTTA ATTAGGACTG TTATGCCAGA TAATTTAGTG CAAGAATCAG TTCGTTTGAA TATGATCATC
ACTAAAGTTT TTAATTCAAA ATATCCATGT CTTACATCAG CTCTTGCAAA GGTCAAAATT AGCTGCAGCA GTTTCCCAAA
CTATCATTTA ACATAAGTAA ATTATAAGAA TCGTACAATT GTCTCTTCTT TATGCTGGAA TTGAGGTAGA AAGAAATTGA
AATTGTAAGA TATTTTGTTT GCATGTGCAG AAAGCTTGTA GTGAATAATA ATGGTAGGAG AACTCAGAGT GTTGACTGCA
CTTGATGTAG CGAAGACACA ATGGTACCAC TTCACAGCAA TTGTGATAGC AGGAATGGGT TTCTTCACTG ATGCCTATGA
CCTCTTCTGC ATTTCCCTGG TTACTAAGCT GTTAGGGAGA CTGTACTACA CAGAACCAGG TGCACCAAAG CCAGGAACTC
TTCCTCCAAG AGTTCAAGCT TCTGTCACTG GTGTTGCTCT CTGTGGCACC TTGGCTGGTC AACTATTCTT TGGTTGGCTT
GGTGACAAAT TGGGGAGAAA AAGGGTCTAT GGTCTCACTC TTGTGCTCAT GGTGGTGTGC TCCCTTGCCT CAGGACTCTC
CTTTGGCTCC ACTCCAAAGG GTGTCTTGGC CACACTTTGC TTCTTCAGGT TCTGGCTAGG GTTTGGGATT GGTGGTGACT
ACCCTCTTTC TGCCACAATC ATGTCTGAAT ACGCCAACAA AAAGACTCGT GGGGCATTCA TTGCAGCAGT GTTTGCCATG
CAAGGATTTG GAATCTTGGC TGGTGGAGTA GTCGCCTTGA TTGTTTCATA TGCGTATGAC CAAAAGTACA ACCTTCCCAC
ATACGAACAA AATCCAGAAG CCTCCATTGT GCCGTCATTT GACTATGTTT GGAGAATCAT TTTGATGTTT GGTGCAATTC
CGGCAGCACT CACCTACTAC TGGCGCATGA AAATGCCTGA GACTGCACGT TACACAGCCC TCGTGGCCAA GAATGCAAAA
CAAGCTGCTT CAGACATGTC TAAGGTGTTG CAAGTGGAAC TTGAAGCTGA AGAGGAGAAG GTGCAGAAAC TGACACAGGA
AAAGAGCCAC AGGTATGGTT TGTTCAGCAA GGAATTTCTC AGACGCCATG GCCTGCATTT GGTTGGAACC ACCACCACTT
GGTTCTTGTT GGACATAGCA TTCTACAGCC AGAACCTTTT CCAAAAAGAC ATCTTCAGTG CAATTGGGTG GATCCCTCCA
GCACAGACAA TGAATGCAAT TCATGAGGTA TACAAGATTT CAAGAGCACA AACACTGATA GCATTGTGCA GCACTGTGCC
AGGTTACTGG TTCACAGTGT TTCTGATTGA TTACATGGGC CGTTTTGCCA TCCAATTGAT GGGGTTCTTC TTCATGACAG
TATTCATGTT TGCTTTGGCT ATACCATATG ATCATTGGAC TAAGAAAGCA AACAGAATAG GGTTTGTGGT GATATACTCC
CTCACCTTTT TCTTTGCCAA CTTTGGTCCA AATTCCACCA CATTTGTTGT GCCAGCAGAG ATCTTCCCAG CAAGGCTTAG
GTCAACCTGT CATGGAATCT CTGCTGCTGC AGGAAAGGCT GGTGCAATTG TGGGAGCATT TGGGTTCCTA TATGCTGCAC
AAAGCAAGGA CCCTAAAAAG ACTGACGCAG GGTACCCTAC AGGAATTGGG ATTAAGAACT CACTCATTGT GCTTGGGGTT
ATCAACTTCT TTGGAATGTT GTTCACCTTG CTGGTTCCTG AATCAAAGGG TAAGTCACTG GAGGAGTTGA GTGGGGAGAA
TGATCGAAGT GCTGATGCTG ATGCTGAGCC TGAAGTTTCT GCTACGACAA GTCGTGTTTG ATTGAACTCT AATCTAAGTT
TGTGTATTCA AATTAATGTG TTATTTTGTA CATTTTAATA CTTGGTTATG GTTGTGAGAT ATGTTTGCAC ATGATTAATT
ATGTCGTGGA TGTGCTAGTT TGTATGTTTT TGTTTGTCTA AGATTGATAC ATGGTAATTG TACTTTTCCT TTTTGGATAA
AAATAACAGC AATAAACAAT ACAGAGTAAT ACTCTATTAC ACTGTCTTAA ATGCAATATA TGTTTGATAA TTGTCTTAAT
ATTTTTAGAA AA

>Vigan.08G360200.01
ATGGTAGGAG AACTCAGAGT GTTGACTGCA CTTGATGTAG CGAAGACACA ATGGTACCAC TTCACAGCAA TTGTGATAGC
AGGAATGGGT TTCTTCACTG ATGCCTATGA CCTCTTCTGC ATTTCCCTGG TTACTAAGCT GTTAGGGAGA CTGTACTACA
CAGAACCAGG TGCACCAAAG CCAGGAACTC TTCCTCCAAG AGTTCAAGCT TCTGTCACTG GTGTTGCTCT CTGTGGCACC
TTGGCTGGTC AACTATTCTT TGGTTGGCTT GGTGACAAAT TGGGGAGAAA AAGGGTCTAT GGTCTCACTC TTGTGCTCAT
GGTGGTGTGC TCCCTTGCCT CAGGACTCTC CTTTGGCTCC ACTCCAAAGG GTGTCTTGGC CACACTTTGC TTCTTCAGGT
TCTGGCTAGG GTTTGGGATT GGTGGTGACT ACCCTCTTTC TGCCACAATC ATGTCTGAAT ACGCCAACAA AAAGACTCGT
GGGGCATTCA TTGCAGCAGT GTTTGCCATG CAAGGATTTG GAATCTTGGC TGGTGGAGTA GTCGCCTTGA TTGTTTCATA
TGCGTATGAC CAAAAGTACA ACCTTCCCAC ATACGAACAA AATCCAGAAG CCTCCATTGT GCCGTCATTT GACTATGTTT
GGAGAATCAT TTTGATGTTT GGTGCAATTC CGGCAGCACT CACCTACTAC TGGCGCATGA AAATGCCTGA GACTGCACGT
TACACAGCCC TCGTGGCCAA GAATGCAAAA CAAGCTGCTT CAGACATGTC TAAGGTGTTG CAAGTGGAAC TTGAAGCTGA
AGAGGAGAAG GTGCAGAAAC TGACACAGGA AAAGAGCCAC AGGTATGGTT TGTTCAGCAA GGAATTTCTC AGACGCCATG
GCCTGCATTT GGTTGGAACC ACCACCACTT GGTTCTTGTT GGACATAGCA TTCTACAGCC AGAACCTTTT CCAAAAAGAC
ATCTTCAGTG CAATTGGGTG GATCCCTCCA GCACAGACAA TGAATGCAAT TCATGAGGTA TACAAGATTT CAAGAGCACA
AACACTGATA GCATTGTGCA GCACTGTGCC AGGTTACTGG TTCACAGTGT TTCTGATTGA TTACATGGGC CGTTTTGCCA
TCCAATTGAT GGGGTTCTTC TTCATGACAG TATTCATGTT TGCTTTGGCT ATACCATATG ATCATTGGAC TAAGAAAGCA
AACAGAATAG GGTTTGTGGT GATATACTCC CTCACCTTTT TCTTTGCCAA CTTTGGTCCA AATTCCACCA CATTTGTTGT
GCCAGCAGAG ATCTTCCCAG CAAGGCTTAG GTCAACCTGT CATGGAATCT CTGCTGCTGC AGGAAAGGCT GGTGCAATTG
TGGGAGCATT TGGGTTCCTA TATGCTGCAC AAAGCAAGGA CCCTAAAAAG ACTGACGCAG GGTACCCTAC AGGAATTGGG
ATTAAGAACT CACTCATTGT GCTTGGGGTT ATCAACTTCT TTGGAATGTT GTTCACCTTG CTGGTTCCTG AATCAAAGGG
TAAGTCACTG GAGGAGTTGA GTGGGGAGAA TGATCGAAGT GCTGATGCTG ATGCTGAGCC TGAAGTTTCT GCTACGACAA
GTCGTGTTTG A

>Vigan.08G360200.01
MVGELRVLTA LDVAKTQWYH FTAIVIAGMG FFTDAYDLFC ISLVTKLLGR LYYTEPGAPK PGTLPPRVQA SVTGVALCGT
LAGQLFFGWL GDKLGRKRVY GLTLVLMVVC SLASGLSFGS TPKGVLATLC FFRFWLGFGI GGDYPLSATI MSEYANKKTR
GAFIAAVFAM QGFGILAGGV VALIVSYAYD QKYNLPTYEQ NPEASIVPSF DYVWRIILMF GAIPAALTYY WRMKMPETAR
YTALVAKNAK QAASDMSKVL QVELEAEEEK VQKLTQEKSH RYGLFSKEFL RRHGLHLVGT TTTWFLLDIA FYSQNLFQKD
IFSAIGWIPP AQTMNAIHEV YKISRAQTLI ALCSTVPGYW FTVFLIDYMG RFAIQLMGFF FMTVFMFALA IPYDHWTKKA
NRIGFVVIYS LTFFFANFGP NSTTFVVPAE IFPARLRSTC HGISAAAGKA GAIVGAFGFL YAAQSKDPKK TDAGYPTGIG
IKNSLIVLGV INFFGMLFTL LVPESKGKSL EELSGENDRS ADADAEPEVS ATTSRV*