GBrowse Details

Vigan.09G044700.01

Basic Information:
Name: Vigan.09G044700.01
Multiple alignment
Variant Information
Position: Chr09:5535145..5540001 (- strand)
Length: 4857
Functional Information:
Description: Similar to Uncharacterized protein. [Q0PJJ4, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.00,31.38,0.00,0.00,0.00,0.00,0.00
Arabidopsis thaliana homolog: AT3G27810.1
Automatic updates:
Name: DQ822906 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB181 (MYB181) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001248770 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor MYB99 (MYB99), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001248921 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB181 (MYB181), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001248936 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB98 (MYB98), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001248950 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB182 (MYB182), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:5535145..5535789 (- strand)
Length: 645
Type: three_prime_UTR
Position: Chr09:5535790..5536129 (- strand)
Length: 340
Type: CDS
Position: Chr09:5538777..5538906 (- strand)
Length: 130
Type: CDS
Position: Chr09:5539050..5539188 (- strand)
Length: 139
Type: CDS
Position: Chr09:5539189..5540001 (- strand)
Length: 813
Type: five_prime_UTR


>Vigan.09G044700.01
GTGAATATAT AATGGTCTTT ACAAACAACG TCTTCAAATT TGTAGAGTTG GCAACTTTAC TTTTGTTCAA TAGGTCAATT
TGAACAATCT GAAATAAACT TTTCTACTTT AAATACTCAT GGGTGAACTC ATCGATACCG TATTGTACTT TTCAAATATG
TAGTGTAGAG ATGAAGTGTG GTGGGTCAGA TTTTAGGGTT ATAATAATAT AAACCACAAT TCCAACTCAT TATTTTCATT
GTTTGCATGG TATTGGATTC CGCTTTAACA TAATCTACTT TCAGGGCGAA AGTTTTGAAG AAAAATATTT TAAAATGAGC
TAGGGGGCCA ACTTTTTTGT TCGCATGGGA TGATGTAACC ATGGTGACAG ATAACTTGAA AATTTTCAAG TCTATTATGT
TCTTTTCTTT GTATTATAAT CCCTAAACTG CACTAATTGT TTAATAGCAC AGGGCTTAAA ATATTTATGA AATATCTACA
ATCCTCTCGT GTTTTGGTAA AAAAAATGAG TATAGACACC TGATATGATC TAGTGCATGT GCGTGACTTA AGAGTACGTA
GTGACACTAT TCTATTAAGT TTTAGTTTTG CCAAAGGAAA CCAAAAACAT AGTCATGCAT GCATGTGTTA ACATGATAAA
CACAGTTAGG TACGTAAAAT CTAGTTAACC CTAATAGAAA ATTTCATTAA AATTAACACA TTATTTATTC TTGCCTCTAT
TTAAACACTC CAACCCCCAT TATTAAGTTA TCGGTATTTC TCTTTCTCCC TCTTCCCCAC CCCATCTTTC TCTCTATCAC
AAACAAAAAC AAAATGGATA AAAAACAGTG CAATACGTCT CAAGATCCTG AAGTGAGAAA AGGGCCATGG ACAATGGAAG
AAGATTTGAT CTTGATCAAC TATATTTCGA ACCATGGGGA AGGTGTTTGG AACTCTTTGG CCAAAGCTGC CGGTCTTAAA
CGTACTGGAA AGAGTTGCCG ACTTAGGTGG CTAAACTACC TCCGTCCTGA TGTTAGAAGA GGGAATATTA CACCCGAGGA
ACAACTTTTG ATCATGGAGC TTCACGCAAA GTGGGGAAAC AGGTGGTCAA AAATTGCCAA GCATCTACCA GGAAGGACTG
ATAATGAGAT AAAAAACTAC TGGAGGACCA GGATTCAGAA GCACATCAAG CAAGCCGAGA ACTCTCAGCA ACAGAGTAAT
TCTAATTCTG AGATAAATGA CCATCAAGCT AGCACTAGCC AAGTGTCCAC CATGGCTGAG CCCATGGAGA CCTACTCTTC
ACCCTGTTAC CAAGGAATGT TAGAGCCATT TTCTACTCAG TTTCCCAATA TTCCAGATCA ATCCAGTTGT TGTACCAATG
AAAACAACAA TTATTGGAGC ATGGAGGATA TCTGGTCAAT GCAGTTACTG AACGGGGATT AAATAAATAA TAAATATTAT
AAAGATAAAC TAAGTGCTTA ATTAAGTTCC ATAAAGCTGG AATCTCTCCT GCTGAAAAAC ATATATCATT AGGTTTGTTT
ATATATAAAG TAGTTGGATG TTTGGTTTTT CGTACAATTA TATGTCAGAA TCTAATTAGT TATGTGCTGT AATATATACG
AGATCTTATA TTAAACTGTA TCTGCATGCT TTTATATCAA ATGAGATGCT TTGTGCATCA GATATGGTTG AGAACCACAA
AGTTTCCGAC GTCTAATATA ATCCCAGTGG GCGTCTTCTC TCTCTAGTTT CGTTCATTTT TCCTTTCGTT GATTGTCTAT
AAGATTAGTA CTTTTAACTA TTTGATAGAG TGTTTTCAGA AAAAAACAAA TCATGTTCTT ACAGGTATAT AGATCAAACA
TATGTAACCA GGTGGTTACG AACATCATAT ATTCACCATG TTGGTAAACT GTTCTTTCTT CTCTTTCTTA TTACGCTCTA
AAATGTTAAC CAAAATCTTT TAGCACTGTA GATTATGTAG CAGCCCGAGC GTAAGATGTG TTTGGGATGG TAAGATAGTA
GTGTCAAACT CACCTTCATA TAAACGGAAA GACAGCCAGA CAAGTATGGG CATGAACTTG CATTTAC

>Vigan.09G044700.01
ATGGATAAAA AACAGTGCAA TACGTCTCAA GATCCTGAAG TGAGAAAAGG GCCATGGACA ATGGAAGAAG ATTTGATCTT
GATCAACTAT ATTTCGAACC ATGGGGAAGG TGTTTGGAAC TCTTTGGCCA AAGCTGCCGG TCTTAAACGT ACTGGAAAGA
GTTGCCGACT TAGGTGGCTA AACTACCTCC GTCCTGATGT TAGAAGAGGG AATATTACAC CCGAGGAACA ACTTTTGATC
ATGGAGCTTC ACGCAAAGTG GGGAAACAGG TGGTCAAAAA TTGCCAAGCA TCTACCAGGA AGGACTGATA ATGAGATAAA
AAACTACTGG AGGACCAGGA TTCAGAAGCA CATCAAGCAA GCCGAGAACT CTCAGCAACA GAGTAATTCT AATTCTGAGA
TAAATGACCA TCAAGCTAGC ACTAGCCAAG TGTCCACCAT GGCTGAGCCC ATGGAGACCT ACTCTTCACC CTGTTACCAA
GGAATGTTAG AGCCATTTTC TACTCAGTTT CCCAATATTC CAGATCAATC CAGTTGTTGT ACCAATGAAA ACAACAATTA
TTGGAGCATG GAGGATATCT GGTCAATGCA GTTACTGAAC GGGGATTAA

>Vigan.09G044700.01
MDKKQCNTSQ DPEVRKGPWT MEEDLILINY ISNHGEGVWN SLAKAAGLKR TGKSCRLRWL NYLRPDVRRG NITPEEQLLI
MELHAKWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHIKQ AENSQQQSNS NSEINDHQAS TSQVSTMAEP METYSSPCYQ
GMLEPFSTQF PNIPDQSSCC TNENNNYWSM EDIWSMQLLN GD*