GBrowse Details

Vigan.09G047700.01

Basic Information:
Name: Vigan.09G047700.01
Multiple alignment
Variant Information
Position: Chr09:6325576..6331694 (+ strand)
Length: 6119
Functional Information:
Description: Similar to Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. [B9GQL5, Populus trichocarpa]
InterPro: Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 (IPR003397)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.57,4.87,5.75,4.95,10.85,5.33,7.53,6.11
Arabidopsis thaliana homolog: AT3G25120.1
Automatic updates:
Name: NM_001249071 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526920 (LOC100526920), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:6325576..6325721 (+ strand)
Length: 146
Type: five_prime_UTR
Position: Chr09:6325722..6325842 (+ strand)
Length: 121
Type: CDS
Position: Chr09:6326458..6326571 (+ strand)
Length: 114
Type: CDS
Position: Chr09:6330132..6330236 (+ strand)
Length: 105
Type: CDS
Position: Chr09:6331125..6331405 (+ strand)
Length: 281
Type: CDS
Position: Chr09:6331406..6331694 (+ strand)
Length: 289
Type: three_prime_UTR


>Vigan.09G047700.01
TCTTCACAAA GTTACCCTCT CACTAGAAAC TTGATTTGGG AGTGACACAG AGAAATCAAC CACTGCACCA TAAACCCTTC
AAATCAAATC GAACAAAACC TTACAACACA ATCGTGGATT GAAAACAAAT AATCCGAAAG AAAAAAATGG GCTCTAAGAA
TGAAGAAGCT TCAGACGAAG GACCTAGCAA TTCACCTCCT TCTTCTTCTT CGTCTCCTTC TTCTCATGCT TGGAAAACTC
GAATCGTTAT TCCAACCCTC CTCGCAGGGG TTGCTGGAGC TGGAATTGGG TTGATTTCAA AGCATCGAAA AACACTTGGT
CTTGCTAATG TGTGTTCTAG CTATGCTGCA AATTTCGCCA TCGTCACAGG GTGCTATTGT GGTGCACGAG AATTTGTGGC
TGCAACTAGA AAAACAGGAC CTGACGACAT ATGGAACTCT GGATTAGCTG GATTTGGAAC TGGTGCTCTT CTTGGGCGAC
TGCAAGGTGG TCAACTGGGT GCAATCCGGT ACTCTGTCGT CTTTGCTGTT GTGGGGACAG CGGCAGACTT TACTTATTTG
AAATCGAAAG ATGCTTTGAG AGATTACACT AAAACAATAT ACCAAGACAT TGAGAATTCA AAAAACAGTG GATCTTGGTT
AAAATTGCCA GAATGGTTTC CAGTTCAAGT ACTCGATGAG GAAGCCCTTG CTGCTAAACG AGCTCAGGAA GAGCAATTCC
TTCAACAAAG GGCAAGGATC CGCAACCTTA AAGAAGAAGA ACCTTGAGAA CTAAATTTTT GTGGATGTTT GCCTGATCCT
TGAGCGAGGC AAACTTTCAC CACGTAAAGC ATTTTGTATA CCCAATTTTA TTTTATTTTA TTGAGTTAGT TTGTAATAAT
GTACTTTTCA AGCTAAAAAG CAATGGCTTC AGCTGAGATT TTGAAAATGT TGAGATTGAA ATTCATGTAC TCATTTGGAT
TGTCTAATGA TTTTTCCCTT CTCAGGGTAG ACAATGTCCA ATTACTATGT GAGGAAAATC TATAAAAGTA TAAATGTTGT
AGTTTGACTT ATGCAA

>Vigan.09G047700.01
ATGGGCTCTA AGAATGAAGA AGCTTCAGAC GAAGGACCTA GCAATTCACC TCCTTCTTCT TCTTCGTCTC CTTCTTCTCA
TGCTTGGAAA ACTCGAATCG TTATTCCAAC CCTCCTCGCA GGGGTTGCTG GAGCTGGAAT TGGGTTGATT TCAAAGCATC
GAAAAACACT TGGTCTTGCT AATGTGTGTT CTAGCTATGC TGCAAATTTC GCCATCGTCA CAGGGTGCTA TTGTGGTGCA
CGAGAATTTG TGGCTGCAAC TAGAAAAACA GGACCTGACG ACATATGGAA CTCTGGATTA GCTGGATTTG GAACTGGTGC
TCTTCTTGGG CGACTGCAAG GTGGTCAACT GGGTGCAATC CGGTACTCTG TCGTCTTTGC TGTTGTGGGG ACAGCGGCAG
ACTTTACTTA TTTGAAATCG AAAGATGCTT TGAGAGATTA CACTAAAACA ATATACCAAG ACATTGAGAA TTCAAAAAAC
AGTGGATCTT GGTTAAAATT GCCAGAATGG TTTCCAGTTC AAGTACTCGA TGAGGAAGCC CTTGCTGCTA AACGAGCTCA
GGAAGAGCAA TTCCTTCAAC AAAGGGCAAG GATCCGCAAC CTTAAAGAAG AAGAACCTTG A

>Vigan.09G047700.01
MGSKNEEASD EGPSNSPPSS SSSPSSHAWK TRIVIPTLLA GVAGAGIGLI SKHRKTLGLA NVCSSYAANF AIVTGCYCGA
REFVAATRKT GPDDIWNSGL AGFGTGALLG RLQGGQLGAI RYSVVFAVVG TAADFTYLKS KDALRDYTKT IYQDIENSKN
SGSWLKLPEW FPVQVLDEEA LAAKRAQEEQ FLQQRARIRN LKEEEP*