GBrowse Details

Vigan.09G055400.01

Basic Information:
Name: Vigan.09G055400.01
Multiple alignment
Variant Information
Position: Chr09:7510569..7514203 (+ strand)
Length: 3635
Functional Information:
Description: Similar to Uncharacterized protein. [I1JLL6, Glycine max]
InterPro: Uncharacterised protein family UPF0497, trans-membrane plant (IPR006702)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.29,10.80,11.22,9.29,34.19,19.98,29.28,14.93
Arabidopsis thaliana homolog: AT3G53850.1
Automatic updates:
Name: NM_001248210 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MARVEL domain-containing protein (LOC100306188), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:7510569..7510878 (+ strand)
Length: 310
Type: five_prime_UTR
Position: Chr09:7510879..7511012 (+ strand)
Length: 134
Type: CDS
Position: Chr09:7512980..7513112 (+ strand)
Length: 133
Type: CDS
Position: Chr09:7513664..7513864 (+ strand)
Length: 201
Type: CDS
Position: Chr09:7513865..7514203 (+ strand)
Length: 339
Type: three_prime_UTR


>Vigan.09G055400.01
CCTCATTTCA ACTTTTTATC CCATAGTTAT TTTTGCATAA AGTAAAAAAA AAAGTGGGGG AAAGCAAAAA GATTCTGGAT
AACAGTAAGC AAGCATTAAC TTTTCCGTCG ATTCCCATCC ATTGCCACTA CTCTAAAGCT ATCTTCCCCA AATACTCATT
CTTTCGATTC TCATTCTCCT CTCTCTCAAA GCTGCTTTCA CAGAAACCCA ATTTACCTTG TCGGAGAGGG TGATAAACAG
AGGAAAATCT CCCCAATGGA AAGGCTCTGA AATTAGGGTT TTTTGGTTGA AGAAGAAGAA AAAGGAAGGG ATGATGAAGC
GGCTGTGGGG TGGGCCCGGA ACGATTAGCG GGTTCCTCTT GAGGTTTGGG CAATGTGCGT TTGGTGCCGC TTCAATTGCT
CTTATGGTCA CTGGTTTTGG CTTCTCTAGC TACACTGCTT TTTGTTATTT AATTGCATCA ATGGGACTTC AATTTCTTTG
GAGCTTTGGA CTTGCATGTC TTGATATTTA TGCCTTGAGG ACAAAGAGAG ACGTGCAAAA TCCAATTCTT GTCAGCCTGT
TTGTTGTAGG CGATTGGGTA ACAGCAACTT TATCACTAGC AGCTGCATGC TCGTCAGCGG GAGTTGTAGT ATTATACTCA
AGAGACCTTA ATATGTGTGC GACTACTAAG CGTCTCACAT GCAACAAGTA TCAGATTTCT GTAGCCATGG CTTTTGTCAC
CTGGGTTCTT ACAGCAATGT CATCGCATGT GATGTTCTGG ATCTTGGCCT CAGTCTAGCT TAACGTATTT CCTTTGCTAG
ATCCCAAGAC CACCATAGAT ATCAAGGTAT CTTGTTGTAA ATTTTGTTGT ATCAATACTT GCCACGACAT GTAGGCAAAT
TTTTCCATGT TTTCCCTTCT CAAAACTATG ATTGATTTTT CATTTTTCAA CCTTGCCACG CCAACCTCAG TCCTAGATAT
AGTTGCTGGT TTAATGTAAA AGCTTGGACA TGATTCCGTA AACTTACTTC CTTATTGTAA CCAAGATATT CTCCTTATGC
TGGGTGCATG CGTTTGTATA TAATCTTGTT CATTTACCAC CTCTAGCCAC ATTCCTTAGT ACTATAACTT AAAAACC

>Vigan.09G055400.01
ATGATGAAGC GGCTGTGGGG TGGGCCCGGA ACGATTAGCG GGTTCCTCTT GAGGTTTGGG CAATGTGCGT TTGGTGCCGC
TTCAATTGCT CTTATGGTCA CTGGTTTTGG CTTCTCTAGC TACACTGCTT TTTGTTATTT AATTGCATCA ATGGGACTTC
AATTTCTTTG GAGCTTTGGA CTTGCATGTC TTGATATTTA TGCCTTGAGG ACAAAGAGAG ACGTGCAAAA TCCAATTCTT
GTCAGCCTGT TTGTTGTAGG CGATTGGGTA ACAGCAACTT TATCACTAGC AGCTGCATGC TCGTCAGCGG GAGTTGTAGT
ATTATACTCA AGAGACCTTA ATATGTGTGC GACTACTAAG CGTCTCACAT GCAACAAGTA TCAGATTTCT GTAGCCATGG
CTTTTGTCAC CTGGGTTCTT ACAGCAATGT CATCGCATGT GATGTTCTGG ATCTTGGCCT CAGTCTAG

>Vigan.09G055400.01
MMKRLWGGPG TISGFLLRFG QCAFGAASIA LMVTGFGFSS YTAFCYLIAS MGLQFLWSFG LACLDIYALR TKRDVQNPIL
VSLFVVGDWV TATLSLAAAC SSAGVVVLYS RDLNMCATTK RLTCNKYQIS VAMAFVTWVL TAMSSHVMFW ILASV*