GBrowse Details

Vigan.09G068800.01

Basic Information:
Name: Vigan.09G068800.01
Multiple alignment
Variant Information
Position: Chr09:9351977..9355028 (+ strand)
Length: 3052
Functional Information:
Description: Similar to Uncharacterized protein. [G7JUJ2, Medicago truncatula]
GO: Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome b5-like heme/steroid binding domain (IPR001199)
Cytochrome b5, heme-binding site (IPR018506)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.14,2.32,74.78,66.53,93.87,58.98,132.27,162.66
Arabidopsis thaliana homolog: AT2G32720.1
Automatic updates:
Name: NM_001249859 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cytochrome b5 (LOC100500611), mRNA.
PubMed ID: 31212671 NCBI(pubmed)
Status: Known Variant
Name: NM_001251267 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative cytochrome B5 (LOC100306652), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:9351977..9352216 (+ strand)
Length: 240
Type: five_prime_UTR
Position: Chr09:9352217..9352306 (+ strand)
Length: 90
Type: CDS
Position: Chr09:9354384..9354450 (+ strand)
Length: 67
Type: CDS
Position: Chr09:9354559..9354809 (+ strand)
Length: 251
Type: CDS
Position: Chr09:9354810..9355028 (+ strand)
Length: 219
Type: three_prime_UTR


>Vigan.09G068800.01
TTTTTTTTCG ACCACAGTAT TGAAAAGTGT CTGGGTTTGG TTGGTTTGAA AAAACCTTCC ACCTCACCAA CCCATTACTA
TCGTGTGCCA ACCAACCAAC AACATTTTAC AATTCATTTC TCACCAACCA CGTTTTTCAA TTCACTTCTC ACCAACTACC
TCTTATTCAA ATCCTCTCAA CTCTACCTTT AGGATTTGCT GAGAGAATTA ACATCGAGAG CTGCTATTTT CTGCTCAACA
ATGGGAGGGG AGAGCAACAA GGTCTTCACT TTAGCTGAGG TTTCTCAGCA CAATAATGCC AAAGATTGTT GGCTTGTCAT
TCATGGCAAG GTTTATAATG TGACGAAGTT CTTGGAGGAC CACCCTGGTG GTGATGATGT CCTCTTGTCT TCCACAGGGA
AGGATGCAAG TAATGATTTT GATGATATTG GTCACAGCAC CAGTGCCGTA GCCATGATGG ATGAGTTCTA TGTTGGAGAC
ATTGATACAT CATCCATCCC CAGCAAGGTG GCGTACACTC CTCCCAACCA ACCTAAGTAT AACCAGGACA AGACACCAGA
GTTCATCATC AGGATCCTCC AGTTTCTAGT TCCCTTGCTT ATCTTGGGTT TGGCAGTTGG TATTCATTTC TACACCAAAT
CAAAATAATC ATATCCATCA ATGCCTTTGC AATAATGTGT TTCTGCAGCA ATGACGAGGG GATGTGGGAT ATCAATTGTG
CTGGTTTCCC TTTTCAATGT AATCCGTTGT TAAATATCCA CCGTCTTTCT GTCATTAGTT TTCTAAAGGA GTATTGTATG
TTCAGCCATT CAAACTTCTA AATTTTTTGG TGATTCTCAA ACTTGCTTTT TGAAGAAAAA AATGTTA

>Vigan.09G068800.01
ATGGGAGGGG AGAGCAACAA GGTCTTCACT TTAGCTGAGG TTTCTCAGCA CAATAATGCC AAAGATTGTT GGCTTGTCAT
TCATGGCAAG GTTTATAATG TGACGAAGTT CTTGGAGGAC CACCCTGGTG GTGATGATGT CCTCTTGTCT TCCACAGGGA
AGGATGCAAG TAATGATTTT GATGATATTG GTCACAGCAC CAGTGCCGTA GCCATGATGG ATGAGTTCTA TGTTGGAGAC
ATTGATACAT CATCCATCCC CAGCAAGGTG GCGTACACTC CTCCCAACCA ACCTAAGTAT AACCAGGACA AGACACCAGA
GTTCATCATC AGGATCCTCC AGTTTCTAGT TCCCTTGCTT ATCTTGGGTT TGGCAGTTGG TATTCATTTC TACACCAAAT
CAAAATAA

>Vigan.09G068800.01
MGGESNKVFT LAEVSQHNNA KDCWLVIHGK VYNVTKFLED HPGGDDVLLS STGKDASNDF DDIGHSTSAV AMMDEFYVGD
IDTSSIPSKV AYTPPNQPKY NQDKTPEFII RILQFLVPLL ILGLAVGIHF YTKSK*