GBrowse Details

Vigan.09G078200.01

Basic Information:
Name: Vigan.09G078200.01
Multiple alignment
Variant Information
Position: Chr09:11005860..11007041 (+ strand)
Length: 1182
Functional Information:
Description: Similar to Uncharacterized protein. [K7KDM7, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.92,20.42,33.19,31.40,0.84,17.35,0.34,24.06
Automatic updates:
Name: KM818428 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU5) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:11005860..11006012 (+ strand)
Length: 153
Type: five_prime_UTR
Position: Chr09:11006013..11006333 (+ strand)
Length: 321
Type: CDS
Position: Chr09:11006416..11006769 (+ strand)
Length: 354
Type: CDS
Position: Chr09:11006770..11007041 (+ strand)
Length: 272
Type: three_prime_UTR


>Vigan.09G078200.01
CTCTCCACCG CCAATTCTAC CAACCTCAGT TAATTAGTCT TACCTAAAAT TTCACACAAG AACGCTCCCT GTCGCAGTGT
TCAGACAGAA CCATTTAAAA TCCGCAGGTC AAGTTCACAG TTTGGCAGAG AAGGGAGAAA TTTTAAGCCT GCAATGGCGA
AAGAGTATGG AGAAGTTGAG TTGTTTGGTT TGAGGGGAAG CCCTTATGCT GGCAGGGTGC AGATAGCGCT GGAACTGAAG
GGGGTGAAAT ACAGATACGT TGAAGAAGAT CTTAGAAACA AGAGTGATCT TCTTCTGAAA TACAACCCTA TTCACAAGAA
GGTTCCTGTG CTTGTCCACA ACGGAAAACC TTTGGCTGAG TCCCTTGTCA TTCTTGAATA CATTGATGAG ATATGGCAGA
ACCATCCCAT CTTGCCGCAG CACCCCTATG ATAGATCTTT GGCTCGATTC TGGTCAAGGT TTATTGATGA CAAGTGTCTG
CCTGCAATAT CAAAGGCTGC ATTTACTGCA AATCAGGAGG AACGGGAGAA AGGCACTGAG GAATCACTTC ATGCTCTTCA
GTTTCTGGAG GATGAACTGA AACACAAGTT CTTTGGTGGT GAGAGTATTG GCCTAGTGGA CATAGCCGCC GGCTTCATAG
CTTTCTGGCT CCCTGCAATT CAAGAGGCTG TGGGGTTGAA ACTGCTCAGC TCTAAGAACT TTCCAAAGCT TTCTAAATGG
AGTGAAGAAT ACACCAACCA CCCCGTTGTC AAAGAGAACC TTCCCCAAAG AGAGAGAGTT GTGGGTTTTT TCAAAGCGCG
ATATGCATCC ATTATTGCTC AAAATTAGGT TAATTATAAG TATGATGGAG ACTCATGAGT CATGATTTAC CAGAAACAGA
AGCAACACTT TTCTTATGTT TTTAACTTTT CTTTTTTGCG TCCACTTTAA GCTCAATTGA CCACCCGAAG GTTTTAAATA
AAAAGTTGTT AGCATTCTAC TTTGGGTGGC TTCATTAAAG ATCTTTGGCT GAAATTTCTT GTAAACTTGT AGTGTTTTAT
CTTCCTATTG TGATAGAAAA CCAATTACCA TCATAAAGAA CATTATCGTT ATTATTTTGA 

>Vigan.09G078200.01
ATGGCGAAAG AGTATGGAGA AGTTGAGTTG TTTGGTTTGA GGGGAAGCCC TTATGCTGGC AGGGTGCAGA TAGCGCTGGA
ACTGAAGGGG GTGAAATACA GATACGTTGA AGAAGATCTT AGAAACAAGA GTGATCTTCT TCTGAAATAC AACCCTATTC
ACAAGAAGGT TCCTGTGCTT GTCCACAACG GAAAACCTTT GGCTGAGTCC CTTGTCATTC TTGAATACAT TGATGAGATA
TGGCAGAACC ATCCCATCTT GCCGCAGCAC CCCTATGATA GATCTTTGGC TCGATTCTGG TCAAGGTTTA TTGATGACAA
GTGTCTGCCT GCAATATCAA AGGCTGCATT TACTGCAAAT CAGGAGGAAC GGGAGAAAGG CACTGAGGAA TCACTTCATG
CTCTTCAGTT TCTGGAGGAT GAACTGAAAC ACAAGTTCTT TGGTGGTGAG AGTATTGGCC TAGTGGACAT AGCCGCCGGC
TTCATAGCTT TCTGGCTCCC TGCAATTCAA GAGGCTGTGG GGTTGAAACT GCTCAGCTCT AAGAACTTTC CAAAGCTTTC
TAAATGGAGT GAAGAATACA CCAACCACCC CGTTGTCAAA GAGAACCTTC CCCAAAGAGA GAGAGTTGTG GGTTTTTTCA
AAGCGCGATA TGCATCCATT ATTGCTCAAA ATTAG

>Vigan.09G078200.01
MAKEYGEVEL FGLRGSPYAG RVQIALELKG VKYRYVEEDL RNKSDLLLKY NPIHKKVPVL VHNGKPLAES LVILEYIDEI
WQNHPILPQH PYDRSLARFW SRFIDDKCLP AISKAAFTAN QEEREKGTEE SLHALQFLED ELKHKFFGGE SIGLVDIAAG
FIAFWLPAIQ EAVGLKLLSS KNFPKLSKWS EEYTNHPVVK ENLPQRERVV GFFKARYASI IAQN*