GBrowse Details

Vigan.09G088600.01

Basic Information:
Name: Vigan.09G088600.01
Multiple alignment
Variant Information
Position: Chr09:12615770..12628795 (+ strand)
Length: 13026
Functional Information:
Description: Similar to Uncharacterized protein. [I1JL94, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
Molecular Function: chaperone binding (GO:0051087)
InterPro: Ubiquitin domain (IPR000626)
BAG domain (IPR003103)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:20.66,12.54,13.78,15.20,17.20,17.79,14.81,13.92
Arabidopsis thaliana homolog: AT3G51780.1
Automatic updates:
Name: NM_001255534 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max BAG and ubiquitin domain-containing protein (LOC100799120), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:12615770..12615841 (+ strand)
Length: 72
Type: five_prime_UTR
Position: Chr09:12615842..12615992 (+ strand)
Length: 151
Type: CDS
Position: Chr09:12619207..12619463 (+ strand)
Length: 257
Type: CDS
Position: Chr09:12619551..12619697 (+ strand)
Length: 147
Type: CDS
Position: Chr09:12628251..12628448 (+ strand)
Length: 198
Type: CDS
Position: Chr09:12628449..12628795 (+ strand)
Length: 347
Type: three_prime_UTR


>Vigan.09G088600.01
CCTCAATCAA CAACCTGCGC TTAGGGTCAA GTTCAGTCCA CACTGTAACT CAAATTTCTT TGCTCCCTTT CGATGAATAA
CGCCGCAGAC TCCGCCAGCG AGATCTCACC AGAGATGAGG GCCGCCGAGA GTGACAGTGG TGGGCCCAGG CCCACGATCA
AGCTTAACGT TTCGTACGGT ACCTCCCACC ATGAAGTTCA CCTCCCGGCC CAATCAACTT TCGGGGATGT TAAGAAACTA
CTTGTCAATA AAACTGGTTT AGAGCCTGAA GAGCAACGAC TTTTCTTCAG AGGGATAGAA AAAGGTGATA ATCAGCATTT
GCACCTCGAA GGTGTAAAGG ACAAGTCAAA GATTTTACTT TTGGAGGGAA ATGCTAGCAA AGAGAGGAAA CTTGAGGAAA
CCAGAAAACA AAATGAGATG TCTAAAGCTT TTGAGGCTAT TGCTAGTGTT AGAGCTGAGG TGGACAAGCT CTCAAATAGG
GTCACTGCCA TAGAAGTAGC TATAAATGGT GGGAATAAAG CTGCTGAGAA AGAGTTTCTT GTGTTGGCAG AGTTGCTTAT
GAGTCAATTG CTAAAACTGG ACAGTATTGA TGCTGAAGGT GAAGCAAAGT TGCAGAGAAA AGCTGAGGTG CGTCGTGTGC
AGACCTTAGT GGATAAATTA GATTCTCTAA AGGCAAGAAA CTCCAATCCT TTTATCAACA GTAGCAGCGC TGTCAAGGTA
ACAACCCAAT GGGAAACCTT TGACTCTGGA ATGGAAAGCT CGGGTACGCG ATCAGATAAC TCACCTTCAA CAAAAATATC
TCAAGATTGG GAGCGATTTG AGTAGGCTCA GAAATTGTTT TGGAACATTG AAGTTATAAC TCTTGTATAA CCTGCCCATC
CTTGTTCCAG ATTCATTTTT TATGTTTGCT TGAACTCTTG GCGCAACGGC AAGATCGTTG CTTTCTGATA TGGTACGCAG
AAGTTTTAAT AGCAGAAATA TTCTCTCAAA GCTAAAGTGG CATGTGTTAA GTCTATCCTT TGCACTTGAT TTTAGGCGAA
ACATGTATAT GAAACTGTAT TTATACTTGA ATATTATTGC ATCCTTAGAT AAGTTTTTTG TCTTCTGTTT GTGAAGTTGT
TAATAGTTTA TGCTGTTAAT GGTGACAACA AACCTAAGAT TAAATGCAAT AT

>Vigan.09G088600.01
ATGAATAACG CCGCAGACTC CGCCAGCGAG ATCTCACCAG AGATGAGGGC CGCCGAGAGT GACAGTGGTG GGCCCAGGCC
CACGATCAAG CTTAACGTTT CGTACGGTAC CTCCCACCAT GAAGTTCACC TCCCGGCCCA ATCAACTTTC GGGGATGTTA
AGAAACTACT TGTCAATAAA ACTGGTTTAG AGCCTGAAGA GCAACGACTT TTCTTCAGAG GGATAGAAAA AGGTGATAAT
CAGCATTTGC ACCTCGAAGG TGTAAAGGAC AAGTCAAAGA TTTTACTTTT GGAGGGAAAT GCTAGCAAAG AGAGGAAACT
TGAGGAAACC AGAAAACAAA ATGAGATGTC TAAAGCTTTT GAGGCTATTG CTAGTGTTAG AGCTGAGGTG GACAAGCTCT
CAAATAGGGT CACTGCCATA GAAGTAGCTA TAAATGGTGG GAATAAAGCT GCTGAGAAAG AGTTTCTTGT GTTGGCAGAG
TTGCTTATGA GTCAATTGCT AAAACTGGAC AGTATTGATG CTGAAGGTGA AGCAAAGTTG CAGAGAAAAG CTGAGGTGCG
TCGTGTGCAG ACCTTAGTGG ATAAATTAGA TTCTCTAAAG GCAAGAAACT CCAATCCTTT TATCAACAGT AGCAGCGCTG
TCAAGGTAAC AACCCAATGG GAAACCTTTG ACTCTGGAAT GGAAAGCTCG GGTACGCGAT CAGATAACTC ACCTTCAACA
AAAATATCTC AAGATTGGGA GCGATTTGAG TAG

>Vigan.09G088600.01
MNNAADSASE ISPEMRAAES DSGGPRPTIK LNVSYGTSHH EVHLPAQSTF GDVKKLLVNK TGLEPEEQRL FFRGIEKGDN
QHLHLEGVKD KSKILLLEGN ASKERKLEET RKQNEMSKAF EAIASVRAEV DKLSNRVTAI EVAINGGNKA AEKEFLVLAE
LLMSQLLKLD SIDAEGEAKL QRKAEVRRVQ TLVDKLDSLK ARNSNPFINS SSAVKVTTQW ETFDSGMESS GTRSDNSPST
KISQDWERFE *