GBrowse Details

Vigan.09G107800.01

Basic Information:
Name: Vigan.09G107800.01
Multiple alignment
Variant Information
Position: Chr09:16169193..16171084 (- strand)
Length: 1892
Functional Information:
Description: Similar to Uncharacterized protein. [I1J7M4, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.19,0.00,5.90,0.29,44.45,0.00
Automatic updates:
Name: BT099065 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-16F24 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:16169193..16169594 (- strand)
Length: 402
Type: three_prime_UTR
Position: Chr09:16169595..16170146 (- strand)
Length: 552
Type: CDS
Position: Chr09:16170294..16170488 (- strand)
Length: 195
Type: CDS
Position: Chr09:16170631..16170846 (- strand)
Length: 216
Type: CDS
Position: Chr09:16170847..16171084 (- strand)
Length: 238
Type: five_prime_UTR


>Vigan.09G107800.01
TCGTTTTCTA CGATATTTTT ATTTCTGCAT TAAACCTACT ATGTACTTTT CTTCAAGGTG AAACGGTCTT TCTCATGGCT
CAGTCCACAA ATTACATGGT ATGATACGGT GCAGTTTAAT TTATGGTATT TCTTCACCTG CTCCAGTGCC TCTATAAATA
CAACAATGGG GCAATAGCAG TTAATCCAAA CAAATTCATA TACAACTTGA TCAATCACTC ATTGCATATT AACATAGAAT
GGCATTGCGT GGATATTACT TCGTTCTTCT TCATGCCCTT GTGTTTGCTG CTCTTGCAAC CTCAGCCTTC TCAAAATTGT
CATCTCATTA CTATGACTAT TCTTGCCCCA AAGCTTTGAG CACCATCAAA ACTGTCGTCG AGGCTGCAGT GCAGAAAGAA
CGCCGTATGG GAGCATCCTT GACACGCCTG CACTTCCATG ATTGTTTTGT TAACGGCTGC GATGGTTCAA TTCTTCTAGA
TTCAACATCC TCCATTGACA GCGAGAAGAA TTCAAATGCT AATTTCCAAT CTGCTAGAGG GTTTGAAGTG GTGGATGAGA
TCAAGCAGGC TGTGGACGAA GCATGTGGGA AACCTGTTGT TTCTTGCGCA GACATATTGG CTGTTGCAGC TCGTGACTCT
GTCGTTGCGT TAGGTGGGCC AACATGGAAG GTGAAACTGG GGAGAAGAGA CTCCACCACA GCAAGTCGTG CAGCAGCAGA
TGCAAACATT CCAGCACCAT TTTTCAGCCT CTCTGAACTC ATCACCAACT TCAGGAACCA TGGTCTTGAT GAGAAGGACC
TTGTTGTTCT AAGTGGAGGC CACTCCATCG GATATGCAAG TTGTGCTACC TTTAGGGCTC ATATCTACAA CGACTCCAAC
ATCGATTCCG ACTTTGCAAA AAATCTCAAA TACATTTGCC CTACAGCTGG TGGTGACTCC AACCTTTCTC CTTTGGACTC
AACTCCTGCT CAATTTGACA AAAACTACTA CTCGAATTTG GTCCAAAAGA AAGGGCTTCT TCACTCTGAT CAAGAACTCT
TCAATGGTGG TTCCACTGAT GATCTTGTCA AAGAGTACAG CTACGACACT GATGATTTCT TCGAAGATTT CGCAGATTCG
ATGATTAAGA TGGGAAATAT TCAGCCTCTC ACAGGGAATC AAGGTGAAAT TCGTGTTAAT TGCAGGAAAG TAAACCAATG
AGTGTGTATC ATACATACAG AATAATCTTG AAGGTGTGAC AGTGTTGCAC TAGTATGACT TATAATTTAT ATATGAATGT
ATGTCTTCTT TACCATATAA TTTGTTTGTT TGAAAACGGA TTCTGAAGAG GTACAACTTC TTTAGATCTC GAGTTCTTTT
CAAGATTCTT CATAAATAAA GAAAGAAAAA GGTTACGCAC CTTCTACCAA ATATACGAAT GATTACACTA TAACTGCAGA
GATAGAAGAA CATCAAACAG TTCGATCTGT AAACGAAGAT AATTCAATTT CATTCAAAAC GATTAAAGTA AAAGTGGAGA
AAAGTTTATG TATGTTTACA GTTATTATTA TAAAATCCGA AAGAGTGTAA TTATGGGTAT AATTAGATTG TGGTGAATCT
AGA

>Vigan.09G107800.01
ATGGCATTGC GTGGATATTA CTTCGTTCTT CTTCATGCCC TTGTGTTTGC TGCTCTTGCA ACCTCAGCCT TCTCAAAATT
GTCATCTCAT TACTATGACT ATTCTTGCCC CAAAGCTTTG AGCACCATCA AAACTGTCGT CGAGGCTGCA GTGCAGAAAG
AACGCCGTAT GGGAGCATCC TTGACACGCC TGCACTTCCA TGATTGTTTT GTTAACGGCT GCGATGGTTC AATTCTTCTA
GATTCAACAT CCTCCATTGA CAGCGAGAAG AATTCAAATG CTAATTTCCA ATCTGCTAGA GGGTTTGAAG TGGTGGATGA
GATCAAGCAG GCTGTGGACG AAGCATGTGG GAAACCTGTT GTTTCTTGCG CAGACATATT GGCTGTTGCA GCTCGTGACT
CTGTCGTTGC GTTAGGTGGG CCAACATGGA AGGTGAAACT GGGGAGAAGA GACTCCACCA CAGCAAGTCG TGCAGCAGCA
GATGCAAACA TTCCAGCACC ATTTTTCAGC CTCTCTGAAC TCATCACCAA CTTCAGGAAC CATGGTCTTG ATGAGAAGGA
CCTTGTTGTT CTAAGTGGAG GCCACTCCAT CGGATATGCA AGTTGTGCTA CCTTTAGGGC TCATATCTAC AACGACTCCA
ACATCGATTC CGACTTTGCA AAAAATCTCA AATACATTTG CCCTACAGCT GGTGGTGACT CCAACCTTTC TCCTTTGGAC
TCAACTCCTG CTCAATTTGA CAAAAACTAC TACTCGAATT TGGTCCAAAA GAAAGGGCTT CTTCACTCTG ATCAAGAACT
CTTCAATGGT GGTTCCACTG ATGATCTTGT CAAAGAGTAC AGCTACGACA CTGATGATTT CTTCGAAGAT TTCGCAGATT
CGATGATTAA GATGGGAAAT ATTCAGCCTC TCACAGGGAA TCAAGGTGAA ATTCGTGTTA ATTGCAGGAA AGTAAACCAA
TGA

>Vigan.09G107800.01
MALRGYYFVL LHALVFAALA TSAFSKLSSH YYDYSCPKAL STIKTVVEAA VQKERRMGAS LTRLHFHDCF VNGCDGSILL
DSTSSIDSEK NSNANFQSAR GFEVVDEIKQ AVDEACGKPV VSCADILAVA ARDSVVALGG PTWKVKLGRR DSTTASRAAA
DANIPAPFFS LSELITNFRN HGLDEKDLVV LSGGHSIGYA SCATFRAHIY NDSNIDSDFA KNLKYICPTA GGDSNLSPLD
STPAQFDKNY YSNLVQKKGL LHSDQELFNG GSTDDLVKEY SYDTDDFFED FADSMIKMGN IQPLTGNQGE IRVNCRKVNQ
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