GBrowse Details

Vigan.09G132800.01

Basic Information:
Name: Vigan.09G132800.01
Multiple alignment
Variant Information
Position: Chr09:24514734..24519373 (- strand)
Length: 4640
Functional Information:
Description: Similar to NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like. [XP_004510934.1, Cicer arietinum]
InterPro: CHCH (IPR010625)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.33,9.26,22.96,13.23,43.46,43.88,40.19,21.42
Arabidopsis thaliana homolog: AT5G18800.1
Automatic updates:
Name: NM_001249329 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527451 (LOC100527451), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250951 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527561 (LOC100527561), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:24514734..24515252 (- strand)
Length: 519
Type: three_prime_UTR
Position: Chr09:24515253..24515385 (- strand)
Length: 133
Type: CDS
Position: Chr09:24518895..24519082 (- strand)
Length: 188
Type: CDS
Position: Chr09:24519083..24519373 (- strand)
Length: 291
Type: five_prime_UTR


>Vigan.09G132800.01
CTTATATGTT ACCAGTAGTA ATATAATGCT ACTGTGGAAT TAATTTTCAT ATTAACAGTA AATTGGTAGC TTATTTCTTA
ACCAAATTAC GAGAGCATCC TTTTGATCTT GTCCACTTCG CTTCTTCCCA ACAACCACGG GTAAGGGCAA TGTCGTAAAT
GCCTTTCCGT TCTCCATTTT CTATTTCCCT CATTTTCCCA GTAATTTACT TTCATTTTTT CAGGAACTTA ACGACGCTGA
TCGAATTGCG CTTTCTCTTT TTTGTTGTGG CTAACAAGTA TTGAACTGCA CATGGCGAGC GCAGTAGATT CCTCGGGAAA
TCCAATCCCA TCGTCGTCGG TGTTGATGGC ATCATCGAAG CACATTGGGA TCCGGTGCCA CTCTGAGAAC TTGGATTTTC
TGAAGTGCAA GAAGAAGGAT CCTAACCCTG AAAAGTGTCT TGACAAGGGT CGCGATGTTA CCCGCTGTGT CCTTGGACTT
TTGAAAGATC TTCATCAGAA GTGCACAAAG GAGATGGATG ATTATGTTGG CTGCATGTAC TACCATACAA ATGAATTTGA
CTTGTGTCGC AAAGAGCAGC AAGCATTTGA GAAAAAGTGT TCTTTGGAAT GAAACTATCC ACTGTTGTCG AAAATAATAA
TGAAGGCGAT TTGGAGTGAG ACAATGCATT TGTTTTCCAT AAAATCATTA ATCTTTTTTG CTTTTACGAC AGTGTGGAAT
ATTTGTCATT GACAATGTTC GCCCTCTAAA TTTTTCTAGA GAAATGCATG CAACCAGTAC AATAACAAAC TCTTCAAACA
TAACTCACAA GAATTATTTT CTGTTGGAAC ATGGTTGTAA TTTGGTTTCT GTGCTCAAAA TGCATATTTC TGATGCCTTC
GTTGTTCCTG ACAACTGAAG TAGGAAGTAA AACACTAAGC ACCCAACAAG TAGCACACCA AAATCTGGCA ATTGTATGAT
TTTCATCTAT CAAAATTCAC TTATGCTAAT TGGACGAGTG AAGTTTTTTC TTATTTACAA CGTTGTCCCT GTATCCTAAT
TTCATCAAAT ATTCAATGAG ATTGTGATGA GATAAACTGG GTATAACATG ACAATGAGTA AAGAAATTGT ATAAATCCAT
GTTCATCTAA A

>Vigan.09G132800.01
ATGGCGAGCG CAGTAGATTC CTCGGGAAAT CCAATCCCAT CGTCGTCGGT GTTGATGGCA TCATCGAAGC ACATTGGGAT
CCGGTGCCAC TCTGAGAACT TGGATTTTCT GAAGTGCAAG AAGAAGGATC CTAACCCTGA AAAGTGTCTT GACAAGGGTC
GCGATGTTAC CCGCTGTGTC CTTGGACTTT TGAAAGATCT TCATCAGAAG TGCACAAAGG AGATGGATGA TTATGTTGGC
TGCATGTACT ACCATACAAA TGAATTTGAC TTGTGTCGCA AAGAGCAGCA AGCATTTGAG AAAAAGTGTT CTTTGGAATG
A

>Vigan.09G132800.01
MASAVDSSGN PIPSSSVLMA SSKHIGIRCH SENLDFLKCK KKDPNPEKCL DKGRDVTRCV LGLLKDLHQK CTKEMDDYVG
CMYYHTNEFD LCRKEQQAFE KKCSLE*