GBrowse Details

Vigan.09G147300.01

Basic Information:
Name: Vigan.09G147300.01
Multiple alignment
Variant Information
Position: Chr09:28168876..28171390 (+ strand)
Length: 2515
Functional Information:
Description: Similar to Uncharacterized protein. [G7LCN6, Medicago truncatula]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: C2 domain (IPR000008)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.52,0.66,20.18,11.93,87.52,153.29,64.85,56.04
Automatic updates:
Name: NM_001248580 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500006 (LOC100500006), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:28168876..28169141 (+ strand)
Length: 266
Type: five_prime_UTR
Position: Chr09:28169142..28169208 (+ strand)
Length: 67
Type: CDS
Position: Chr09:28169778..28169843 (+ strand)
Length: 66
Type: CDS
Position: Chr09:28169939..28170065 (+ strand)
Length: 127
Type: CDS
Position: Chr09:28170689..28170803 (+ strand)
Length: 115
Type: CDS
Position: Chr09:28171070..28171144 (+ strand)
Length: 75
Type: CDS
Position: Chr09:28171145..28171390 (+ strand)
Length: 246
Type: three_prime_UTR


>Vigan.09G147300.01
TTAATATTAA CTGGAAGCTG GCGTTTAGTC CAAGTCGTGT AATAATTTCT TGGGTTAACG GCAACCTTTT GAAATAAAGG
AGAGAAACGT TTTGAGGAAA GTTGGATCCA GGAAAAATCC ATCTCCAATT GGCACTATTC GGTTCAGGCA CTTTCTGGTA
CAGTGATTTT CACCATTTTT TCAACTATAT TAAGACTTCA CAGAAGAAGC ATCTTGAGTC AAATAGAATC TGTCAAGTGT
TGTGTGTCCA AACTTCAATT TCAAAGATGC CTCGTGGAAC GCTTGAAGTT ATTTTGATCA GCGCAAAAGG CCTTGATGAC
AATGATTTTC TCTCCAGCAT AGATCCTTAT GTGATTCTCA CATACAGGAC ACAGGAGCAC AAGAGCACTG TGCAAGAAGA
TTCTGGATCC AAACCTCAAT GGAACGAGAG CTTTCTTTTC ACTGTTTCTG ACAGTACTTC TGAACTGAAT CTCAAGATCA
TGGATAAAGA TAACTTTACT CAGGATGATT CTCTTGGCGA GACAAACATT GATTTAGGTC CACTGTTTGA AGTGGGTAGC
CTTCCAGAAA CTGTTCACAA GGTTGTGAAG GACGAAGAAT ATTGTGGAGA GATTAAGGTG GCTCTCACTT TCACTCCTGA
GAGAAACGAA GAGCAGGAAT ACAGTGTAGG AGATGAGAGC TATGGTGGAT GGAAAGAATC AAGTGGGGAA TTCTAGAGTG
AAAGAAATGC TTACATACTT CTTTGGTTTG GCGCATAATT AATTTTACAA TGAGAAACAA AGCATTTTTG GGTCACATTT
TGGAAATTTT AATTATTGTG CTTTCTGGTG TGAAAATCCA ATGGTGTTTT GCTGTTTGCT TGCCTTTCTG CCATACAAAA
ATACATTTTG CTTGACATGT TTTCTTTTAT GCAGTTAACA TTTTAAGAGC AATGTTATTT TCATTATAAT GATTATTATT
AA

>Vigan.09G147300.01
ATGCCTCGTG GAACGCTTGA AGTTATTTTG ATCAGCGCAA AAGGCCTTGA TGACAATGAT TTTCTCTCCA GCATAGATCC
TTATGTGATT CTCACATACA GGACACAGGA GCACAAGAGC ACTGTGCAAG AAGATTCTGG ATCCAAACCT CAATGGAACG
AGAGCTTTCT TTTCACTGTT TCTGACAGTA CTTCTGAACT GAATCTCAAG ATCATGGATA AAGATAACTT TACTCAGGAT
GATTCTCTTG GCGAGACAAA CATTGATTTA GGTCCACTGT TTGAAGTGGG TAGCCTTCCA GAAACTGTTC ACAAGGTTGT
GAAGGACGAA GAATATTGTG GAGAGATTAA GGTGGCTCTC ACTTTCACTC CTGAGAGAAA CGAAGAGCAG GAATACAGTG
TAGGAGATGA GAGCTATGGT GGATGGAAAG AATCAAGTGG GGAATTCTAG 

>Vigan.09G147300.01
MPRGTLEVIL ISAKGLDDND FLSSIDPYVI LTYRTQEHKS TVQEDSGSKP QWNESFLFTV SDSTSELNLK IMDKDNFTQD
DSLGETNIDL GPLFEVGSLP ETVHKVVKDE EYCGEIKVAL TFTPERNEEQ EYSVGDESYG GWKESSGEF*