GBrowse Details

Vigan.09G175100.01

Basic Information:
Name: Vigan.09G175100.01
Multiple alignment
Variant Information
Position: Chr09:31792925..31794464 (- strand)
Length: 1540
Functional Information:
Description: Similar to Uncharacterized protein. [I1KHT7, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:17.34,6.25,0.40,0.38,4.50,0.12,25.30,0.07
Automatic updates:
Name: BT096397 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-20P11 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:31792925..31793285 (- strand)
Length: 361
Type: three_prime_UTR
Position: Chr09:31793286..31794022 (- strand)
Length: 737
Type: CDS
Position: Chr09:31794197..31794329 (- strand)
Length: 133
Type: CDS
Position: Chr09:31794330..31794464 (- strand)
Length: 135
Type: five_prime_UTR


>Vigan.09G175100.01
CTTCTGCACT TTCCACCTTC CCATAGAGTT ACAAAGAGGA CCTTTCGTTC TCTCTCTATC TCTCTCTCTC TCTCTCTCTC
TTTCTCTCTC TCTTGCATAG TTCAAGTAAG AACCCTAATT TTACAGAGCC AAAAAATGGG AAGAGCTCCT TGTTGTTCTA
AAGTAGGGTT GCACAAAGGT CCATGGACTC CTAAAGAAGA TGCATTGCTT ACAAAGTATA TCCAAGCTCA TGGAGAAGGC
CAATGGAAAT CACTACCCAA AAAAGCTGGG CTTCTTAGAT GTGGGAAAAG TTGCAGATTG AGATGGATGA ATTATCTGAG
ACCTGATATA AAGAGAGGAA ACATAACCCC AGAAGAAGAT GATCTTATAA TCAGAATGCA TTCACTTTTG GGGAATAGAT
GGTCCCTCAT AGCAGGAAGA TTACCAGGCA GAACCGACAA TGAAATAAAG AACTATTGGA ACACCCATCT CTGCAAAAAG
CTGAAAAATC AAACAGGAGA AGATACTGAG ACACCCAATT CCTTGGAGAG TCCTCAGCAA GAACCTGCAA GTGGCAGCAA
AAAGAAGAAG AACGGTGGCA AAAAGAAGAA CAAGCAGAAG AACAAAGGAG ACAAAGATAA TGCAGAGCCA CCAAAGACAC
AAGTTTACCT ACCAAAACCA ATCAGAGTGA AGGCTTTGTA TTTGCCAAGA ACAGATAGTA ATAACACATA CACCTTTGAT
TCCAACTCGG CAAGTGCATC AACAAACCAA GAAAAGGAAG AAAGCCCCTT GACAAAAGAA TCAAACTTGG CTAGTGAATT
TAGAAATGTG GGAGAAAGTG ATGATTTTGG CTTCTTCAGT GAGGACCATG ACCTGGTCAA TGCCTCTGAT ATGGAATGCC
ACTCTTATTT TCCTTCAGAT CATGGCTCTC TGCAACAACT GTATGAAGAA TATTACCACC TCCTGAACAT GGATCATAGC
CAATTCATCG AAATGAGTTC ATTTGGGGAA TCTCTATTCA CTTGATAAAG ATGAGACTCA TCTCTCATCA TACTCGTACA
AGAGTTACAA TTTTACTGTT CATGTGAAAA AAACATTGTT GGTAAATAAT TTGTAAGTAA TTCTGTGACT GTGTTTACTG
AGTCTTGAGA AACTTTGACT ATGATGAATC TGCAACACTC GTCACAGTTA AACATTTTTA GAAAAAAGAT ATATATATAT
ATATTAGTTA AAGAATAATG CTGAGCATAT TGATCAACCA CTCATGTTAC TTTATACTTT TATAATTTAT ATTGTCTATC
GTATCTAATC TCATCTTGGT TTTTGCACAA TTAAAAATTC AGTCACTTGT GTATGATGCA CTCCATAAAC AATTGCCATT
CACTGA

>Vigan.09G175100.01
ATGGGAAGAG CTCCTTGTTG TTCTAAAGTA GGGTTGCACA AAGGTCCATG GACTCCTAAA GAAGATGCAT TGCTTACAAA
GTATATCCAA GCTCATGGAG AAGGCCAATG GAAATCACTA CCCAAAAAAG CTGGGCTTCT TAGATGTGGG AAAAGTTGCA
GATTGAGATG GATGAATTAT CTGAGACCTG ATATAAAGAG AGGAAACATA ACCCCAGAAG AAGATGATCT TATAATCAGA
ATGCATTCAC TTTTGGGGAA TAGATGGTCC CTCATAGCAG GAAGATTACC AGGCAGAACC GACAATGAAA TAAAGAACTA
TTGGAACACC CATCTCTGCA AAAAGCTGAA AAATCAAACA GGAGAAGATA CTGAGACACC CAATTCCTTG GAGAGTCCTC
AGCAAGAACC TGCAAGTGGC AGCAAAAAGA AGAAGAACGG TGGCAAAAAG AAGAACAAGC AGAAGAACAA AGGAGACAAA
GATAATGCAG AGCCACCAAA GACACAAGTT TACCTACCAA AACCAATCAG AGTGAAGGCT TTGTATTTGC CAAGAACAGA
TAGTAATAAC ACATACACCT TTGATTCCAA CTCGGCAAGT GCATCAACAA ACCAAGAAAA GGAAGAAAGC CCCTTGACAA
AAGAATCAAA CTTGGCTAGT GAATTTAGAA ATGTGGGAGA AAGTGATGAT TTTGGCTTCT TCAGTGAGGA CCATGACCTG
GTCAATGCCT CTGATATGGA ATGCCACTCT TATTTTCCTT CAGATCATGG CTCTCTGCAA CAACTGTATG AAGAATATTA
CCACCTCCTG AACATGGATC ATAGCCAATT CATCGAAATG AGTTCATTTG GGGAATCTCT ATTCACTTGA 

>Vigan.09G175100.01
MGRAPCCSKV GLHKGPWTPK EDALLTKYIQ AHGEGQWKSL PKKAGLLRCG KSCRLRWMNY LRPDIKRGNI TPEEDDLIIR
MHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLCKKLKNQT GEDTETPNSL ESPQQEPASG SKKKKNGGKK KNKQKNKGDK
DNAEPPKTQV YLPKPIRVKA LYLPRTDSNN TYTFDSNSAS ASTNQEKEES PLTKESNLAS EFRNVGESDD FGFFSEDHDL
VNASDMECHS YFPSDHGSLQ QLYEEYYHLL NMDHSQFIEM SSFGESLFT*