GBrowse Details

Vigan.09G175400.01

Basic Information:
Name: Vigan.09G175400.01
Multiple alignment
Variant Information
Position: Chr09:31839862..31846174 (- strand)
Length: 6313
Functional Information:
Description: Similar to ORM1-like protein 3-like. [XP_004510647.1, Cicer arietinum]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: ORMDL (IPR007203)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:354.06,165.53,51.23,63.45,63.84,152.29,72.41,55.91
Arabidopsis thaliana homolog: AT5G42000.1
Automatic updates:
Name: NM_001251583 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527600 (LOC100527600), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001252883 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100813346 (LOC100813346), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:31839862..31840387 (- strand)
Length: 526
Type: three_prime_UTR
Position: Chr09:31840388..31840526 (- strand)
Length: 139
Type: CDS
Position: Chr09:31843731..31843879 (- strand)
Length: 149
Type: CDS
Position: Chr09:31845686..31845871 (- strand)
Length: 186
Type: CDS
Position: Chr09:31845872..31846174 (- strand)
Length: 303
Type: five_prime_UTR


>Vigan.09G175400.01
TTATTTACGA GTAAAAACCA ATTTAAGCTT TCAATTTCAA TTCCTCCACA CACAGAAACA CACGCCATCC ATCATCCCTG
ATATTTTAAT AAAAGAGAGA GAGAGAGAGG GAGAGAGACA AGGAGAAGGA GAAAGAGAGA GAAAGAGAAG AGGGTGTGTT
TCTGGGTTTT GAAATTTTGA GGCCCCATCA ATCAAAGCCC CATCAAATTG TCCAAGCATT TGAAAGGTGG AAACTTTTGC
ATCTGGGATC GTGTAATTGG GGTTTTGCGT CAAAAGGGTA TCTATCAATC TATATTGGGT TTGATGGCAA ATCTGTACGT
GAAGGCGGTG CCACCGGCGG ATCTGAACCG GAACACGGAG TGGTTTACGT ACCCTGGCGT CTGGACCACC TACATCCTCA
TCCTTTTCTT TTCTTGGATC CTCGTTCTCT CCGTCTTCGG TTGCTCCCCT GGCATCGCAT GGACCATCGT TAATCTCGCA
CATTTTGCTG TAACATATCA CTTTTTTCAC TGGAAGAAAG GAACTCCATT TGCAGAGGAC CAAGGCATCT ACAATAGATT
GACATGGTGG GAGCAGGTAG ACAATGGAAA GCAGCTTACT CGTAACAGGA AGTTTCTAAC AGTTGTTCCT TTGGTCCTGT
ACTTGATAGC CTCCCACACA ACCGACTATC AGAATCCAAT GCTGTTCTTC AATACTGTTG CTGTGATTGT GCTGGTTGTT
GCAAAGTTCC CCCACATGCA CAAGGTGAGG ATTTTTGGAA TCAATGCTGA TAAGTGAAAT GTTGAAAACC TGGTCACCTG
CTCAAGAGCC TCTTGTCCTT TTGTTCTGGA AAAAGGTCAC ACCTTTGTAT AGAAGGCAGA AGTGGAAGGA TACTCAAGTA
ATGTTTTGTT GCCAACTGCC TTTTAAGCTG CTTCTAAAGT ATTATTAAAC AAATAAATAT GTTGAGTTAT TTCTGTACAG
TAGAGAAGTA TATGTATCGA ATTATAACGG TGCTTTTAAA ATGTACCTTT CTTTTCTTGC CTTTTTCCTT TTATTCATGC
CTCCGAACTG AGATATACAA GAATCATCCT TTGCATTGGT ATCCAAGTTT ATTGGTATAA CCTTCTCTTT TCAAAATAAA
GGTCTTTGTC ATCATGAGCA TAAGTGGAAT ACTTACCTTA GACGTCATCT GAAATTTGAC AAGTCAAATG CTGAGTTTTG
GCCACAAAAA GAAAGTAAAG ACATTCTCGT ATGAGAGAAA AGTTTTATGA ATGATCTTGT GGAAATTTGA AAACCCATGT
CACACTATGT TGAAAACTCA AAG

>Vigan.09G175400.01
ATGGCAAATC TGTACGTGAA GGCGGTGCCA CCGGCGGATC TGAACCGGAA CACGGAGTGG TTTACGTACC CTGGCGTCTG
GACCACCTAC ATCCTCATCC TTTTCTTTTC TTGGATCCTC GTTCTCTCCG TCTTCGGTTG CTCCCCTGGC ATCGCATGGA
CCATCGTTAA TCTCGCACAT TTTGCTGTAA CATATCACTT TTTTCACTGG AAGAAAGGAA CTCCATTTGC AGAGGACCAA
GGCATCTACA ATAGATTGAC ATGGTGGGAG CAGGTAGACA ATGGAAAGCA GCTTACTCGT AACAGGAAGT TTCTAACAGT
TGTTCCTTTG GTCCTGTACT TGATAGCCTC CCACACAACC GACTATCAGA ATCCAATGCT GTTCTTCAAT ACTGTTGCTG
TGATTGTGCT GGTTGTTGCA AAGTTCCCCC ACATGCACAA GGTGAGGATT TTTGGAATCA ATGCTGATAA GTGA

>Vigan.09G175400.01
MANLYVKAVP PADLNRNTEW FTYPGVWTTY ILILFFSWIL VLSVFGCSPG IAWTIVNLAH FAVTYHFFHW KKGTPFAEDQ
GIYNRLTWWE QVDNGKQLTR NRKFLTVVPL VLYLIASHTT DYQNPMLFFN TVAVIVLVVA KFPHMHKVRI FGINADK*