GBrowse Details

Vigan.09G187000.01

Basic Information:
Name: Vigan.09G187000.01
Multiple alignment
Variant Information
Position: Chr09:33244416..33245803 (+ strand)
Length: 1388
Functional Information:
Description: Similar to uncharacterized LOC101211901. [XP_004155895.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.29,0.17,29.50,7.03,59.73,6.70,142.68,5.91
Automatic updates:
Name: NM_001250474 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306604 (LOC100306604), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251758 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527099 (LOC100527099), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:33244416..33244594 (+ strand)
Length: 179
Type: five_prime_UTR
Position: Chr09:33244595..33244759 (+ strand)
Length: 165
Type: CDS
Position: Chr09:33244926..33245047 (+ strand)
Length: 122
Type: CDS
Position: Chr09:33245355..33245484 (+ strand)
Length: 130
Type: CDS
Position: Chr09:33245485..33245803 (+ strand)
Length: 319
Type: three_prime_UTR


>Vigan.09G187000.01
TGAGCAAAGC CCACCAAACC AATGCTCACT ATTAATAACT AAATGATTTT GTGACGTTAT CATTGTACTA TTACTATATA
TCAATAAGCC ATCCATCAAT ACTTTTATTC CTTTTCTTCT TCTTCTTCTT CATCTTATCT TCTACTTTTC TTCATGTTCT
TCTTGAAGAA TTAGAATTGA TGGCAGTTAA CAGCTATTCT TCAGCTCAAA TCTCACTTCA GAAACATGGT TCATTTCTGA
AATATGCCAG CAAAGATTTG AAGTCCAAAC ACTGCTCTGT CCCACAGAAA AAAGCACCAG TTGGTCCAGT AGCATTTAGA
ATCACAGCAT CCATCAAGAA CAAGATTTAT GAGGACAAAT CTCAGGGCAT AATTTGCTAT GAAGATGAGA GTGGAGAAAT
AATTTGTGAA GGATATGATG AAGGGCCTCG TTATCAACGA ATTCCAAGGC CAACCCATCA TCCAAGGGAT GTTGAAATCA
TGAATCTTGT GCAACAACAA AGTTGGCTGC AGATTGTTAA AGGGGAAGAA ATCAACCATT TAGCAAAAGG AGTTATTCGT
CAACAAGAGG ATTTAAACTA CAACAGATGG CTTTAACTTG TCCAAAACCA ATCAGGCTTT TGTCACACTC AAAAACCTTA
ACAGTTACAT GCAGTGCTAA TTTGTAGCAG AAAGGAATAA TAGCACAAAT ATATGCTGTA ATTGGTTAAT CAAATAGGAC
AAGTTCTTTC CTCAGAACAA AGTTCATGAA AGTTGTAAAA ATTGACAGTG GTGAATGGAG ATGCTTTTCT TTTTCAATCT
GTTCATACAG TTTCACATCA GAATTTTATT ATCTGATAGA TGAAAGGAAG TTAAGTAATT ATGATTCACA GAGCAGCAAG
CAAGGAATTT GGCTTTATAA TAATACTTAC ATCCG

>Vigan.09G187000.01
ATGGCAGTTA ACAGCTATTC TTCAGCTCAA ATCTCACTTC AGAAACATGG TTCATTTCTG AAATATGCCA GCAAAGATTT
GAAGTCCAAA CACTGCTCTG TCCCACAGAA AAAAGCACCA GTTGGTCCAG TAGCATTTAG AATCACAGCA TCCATCAAGA
ACAAGATTTA TGAGGACAAA TCTCAGGGCA TAATTTGCTA TGAAGATGAG AGTGGAGAAA TAATTTGTGA AGGATATGAT
GAAGGGCCTC GTTATCAACG AATTCCAAGG CCAACCCATC ATCCAAGGGA TGTTGAAATC ATGAATCTTG TGCAACAACA
AAGTTGGCTG CAGATTGTTA AAGGGGAAGA AATCAACCAT TTAGCAAAAG GAGTTATTCG TCAACAAGAG GATTTAAACT
ACAACAGATG GCTTTAA

>Vigan.09G187000.01
MAVNSYSSAQ ISLQKHGSFL KYASKDLKSK HCSVPQKKAP VGPVAFRITA SIKNKIYEDK SQGIICYEDE SGEIICEGYD
EGPRYQRIPR PTHHPRDVEI MNLVQQQSWL QIVKGEEINH LAKGVIRQQE DLNYNRWL*