GBrowse Details

Vigan.09G193900.01

Basic Information:
Name: Vigan.09G193900.01
Multiple alignment
Variant Information
Position: Chr09:33987115..33990238 (+ strand)
Length: 3124
Functional Information:
Description: Similar to mitochondrial intermembrane space import and assembly protein 40-like isoform X4. [XP_004510474.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.46,3.46,10.41,4.25,11.64,13.21,12.37,5.42
Arabidopsis thaliana homolog: AT5G23395.1
Automatic updates:
Name: NM_001349684 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max hypothetical protein (LOC100305988), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:33987115..33987249 (+ strand)
Length: 135
Type: five_prime_UTR
Position: Chr09:33987250..33987349 (+ strand)
Length: 100
Type: CDS
Position: Chr09:33987454..33987485 (+ strand)
Length: 32
Type: CDS
Position: Chr09:33987573..33987698 (+ strand)
Length: 126
Type: CDS
Position: Chr09:33989824..33990003 (+ strand)
Length: 180
Type: CDS
Position: Chr09:33990004..33990238 (+ strand)
Length: 235
Type: three_prime_UTR


>Vigan.09G193900.01
TAGAGAAGCA ATCTCAGAAT TTCACTTTCC GTGTAGAGAG GAGATACCAA TTCAGAATTG GCTTCAAAGT TTGAATTTTT
AACGCACCAG AAAACCAGAG GTTCAGAATT GAGGACTCAG AAATTAGGAT TCACGATGGG TCAAATTGAA AGCGCAGAAG
CTGCGGCGGA GACTCAAACC ACCATCATCA CCACCGACAC CTCCAAACCA ACTTCCTTGG AATCCGCGCT CGCAGAAGCT
GCAGAATATG GAAGTCAACA TACTGAGTCC ATCGAGGCAA TGGCTCAGAA AGCTCTCGAA TGCCCCTGCA TTGCTGATTT
GCGAACTGGT TCCTGTGGCT CTCAGTTCTC AGAGGCATTT CTGTGTTTTC TCAAGAGTAC CTCTGAAGAA AAGGGCTCAG
ACTGCGTACA CCCGTTCATT GCTCTGCAGA GCTGCATCAA GGCCAATCCA GATGCATTCT CTAAGGACAT TTTAGGCGAA
GAAGAAAGCA ATGAGTTGGG GCCAGTCCTA GAATATGAAA TACTTCCTCC CAGATGGGCT AAGGAATCTG AAAGACCAAA
ATCCAATCTT TAAGGGAAAA GTTGGACTCT CGTTCGGCAA CTTCTTGGAG AAGGTTGTGT TAGATTAATA ATGAATTTGT
ATTAGTGTTG CCTGCTTAGA AAAGTGACAT GATGTATCTC TTCCACAAAA TGCTTCATCT CGTGCAATGG CTTTATACCA
CAAAATATAA TTTATTTTCT ATATAGTTTT GGGAATACAC TCAAATGCTT GCATCTTTCT TTCTATCTAC TGGAAACCTT
TAAAAGAG

>Vigan.09G193900.01
ATGGGTCAAA TTGAAAGCGC AGAAGCTGCG GCGGAGACTC AAACCACCAT CATCACCACC GACACCTCCA AACCAACTTC
CTTGGAATCC GCGCTCGCAG AAGCTGCAGA ATATGGAAGT CAACATACTG AGTCCATCGA GGCAATGGCT CAGAAAGCTC
TCGAATGCCC CTGCATTGCT GATTTGCGAA CTGGTTCCTG TGGCTCTCAG TTCTCAGAGG CATTTCTGTG TTTTCTCAAG
AGTACCTCTG AAGAAAAGGG CTCAGACTGC GTACACCCGT TCATTGCTCT GCAGAGCTGC ATCAAGGCCA ATCCAGATGC
ATTCTCTAAG GACATTTTAG GCGAAGAAGA AAGCAATGAG TTGGGGCCAG TCCTAGAATA TGAAATACTT CCTCCCAGAT
GGGCTAAGGA ATCTGAAAGA CCAAAATCCA ATCTTTAA

>Vigan.09G193900.01
MGQIESAEAA AETQTTIITT DTSKPTSLES ALAEAAEYGS QHTESIEAMA QKALECPCIA DLRTGSCGSQ FSEAFLCFLK
STSEEKGSDC VHPFIALQSC IKANPDAFSK DILGEEESNE LGPVLEYEIL PPRWAKESER PKSNL*