GBrowse Details

Vigan.09G201600.01

Basic Information:
Name: Vigan.09G201600.01
Multiple alignment
Variant Information
Position: Chr09:34797392..34801997 (- strand)
Length: 4606
Functional Information:
Description: Similar to Uncharacterized protein. [I1KUR4, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:164.83,70.71,35.46,48.00,31.99,27.08,45.66,30.91
Arabidopsis thaliana homolog: AT1G03930.1, AT1G04440.1, AT1G72710.1, AT2G19470.1, AT3G23340.1, AT4G14340.1, AT4G26100.1, AT4G28540.1, AT5G43320.1, AT5G44100.1, AT5G57015.1
Automatic updates:
Name: NM_001255670 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max casein kinase I (LOC100795570), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:34797392..34797766 (- strand)
Length: 375
Type: three_prime_UTR
Position: Chr09:34797767..34798072 (- strand)
Length: 306
Type: CDS
Position: Chr09:34798722..34798864 (- strand)
Length: 143
Type: CDS
Position: Chr09:34799082..34799145 (- strand)
Length: 64
Type: CDS
Position: Chr09:34799229..34799311 (- strand)
Length: 83
Type: CDS
Position: Chr09:34799450..34799576 (- strand)
Length: 127
Type: CDS
Position: Chr09:34799672..34799756 (- strand)
Length: 85
Type: CDS
Position: Chr09:34799835..34799898 (- strand)
Length: 64
Type: CDS
Position: Chr09:34799994..34800055 (- strand)
Length: 62
Type: CDS
Position: Chr09:34800559..34800629 (- strand)
Length: 71
Type: CDS
Position: Chr09:34800710..34800805 (- strand)
Length: 96
Type: CDS
Position: Chr09:34800892..34801040 (- strand)
Length: 149
Type: CDS
Position: Chr09:34801148..34801217 (- strand)
Length: 70
Type: CDS
Position: Chr09:34801573..34801613 (- strand)
Length: 41
Type: CDS
Position: Chr09:34801716..34801791 (- strand)
Length: 76
Type: CDS
Position: Chr09:34801792..34801997 (- strand)
Length: 206
Type: five_prime_UTR


>Vigan.09G201600.01
CACACAACGA TCATTCTCAC TCTCTTTGTG TCCGTTTTCT TTTATCCGTT TCTCTTTCCC GATTTTGACC TTGTTTTTTC
CTGTTTCCCG ATTTTGCCCT CTTCTTCTTC TCCCATGACC TACTTCAACT CGTAGCTAGC TACACTCCGC GTTTGCTTTT
CCAATTCCAA ATTTCAGTTT CCCAAACCTC TTAGGGTTTC GGCCGAATGG AAACTCGAGT TGGGAACAAG TTCCGTCTCG
GTCGGAAAAT TGGCAGCGGA TCCTTCGGAG AGATCTATCT CGGAACTAAT TTTCAGACGA ATGAAGAGGT TGCGATTAAG
CTTGAAAGTG TGAAAACCAA GCACCCTCAA CTGTTGTATG AATCGAAGCT GTATAAAATT CTGCAAGGAG GAAATGGGAT
TCCAAATGTG AAATGGTACG GTGTTGAAGG AGAGTACAAC GTGCTCGTGA TGGATTTACT TGGCCCTAGT CTTGAGGATT
TATTCAACTT CTGTAGTCGG AAATTGTCTC TCAAAACTGT TCTTATGCTT GCTGATCAGA TGATAAATCG AGTTGAATTT
GTTCATTCCA AATCATTTTT ACATCGCGAC ATCAAACCAG ACAACTTCCT TATGGGTTTA GGAAGGCGTG CAAATCAAGT
GTATATCATT GACTTTGGCC TTGCTAAGAA ATATAGAGAC ACCTCTACCC ATCAGCATAT CCCATACAGA GAGAACAAGA
ATTTGACAGG AACTGCTAGG TATGCTAGTA TGAATACTCA TCTGGGAATT GAGCAAAGCC GCAGGGATGA TTTAGAGTCA
CTTGGATATG TTCTTATGTA CTTTTTAAGA GGAAGTCTGC CTTGGCAGGG ATTGAAAGCT GGTACTAAGA AGCAGAAGTA
CGAGAAGATT AGTGAGAAGA AAGTTTCTAC TTCTATTGAG TCTCTCTGTC GTGGCTATCC CTCAGAATTT GCTTCATACT
TCCATTACTG CCGGTCACTG AGGTTTGATG ACAAACCAGA TTATGCTTAT TTGAAAAGAC TTCTGCGTGA CCTTTTCATT
CGTGAAGGGT TCCAGTTTGA TTATGTCTTT GATTGGACCA TTTTGAAATA TCAGCAATCT CAAAGTGCCA CTGCCCCTGC
CCGTGCTATT GGTCCTGCTG CTGGACCAAG TTCAGGCGTG CCACCACTAG CGGCAAATAC TGATGGACAG TTAGGTGGAG
AGGATGGTAG GCATAATAAT TGGTCTTCAT CAGATCCTAC TCGTAGGAGA AACCCTGTAC CTTTTGCTAA TGATGGCGTG
TTATCGAGAC AAAAGGGCCC AGTTACATAT GACTCAACTC AATCTAAAGA TGTTATGTTG TCAAGCTCTA ATTTTTTCCG
GCCAAGTGGA TCTGCAAGGC GAGGGGCTGT CTCAGGCAGC CGAGAATCCC GTGATGTAGT TGTTGGCAGT GAGACTGAGG
CTTCTCGTCC TCTAACTCTG GATTCAAGTC AGGGAGCACT TCGTAAAATG TCTGTTCCTG GTGCTCAGAG AAGTTCAGCA
ATCACGTCTT CTGAGCACAA CCGTACATCC TCTGGCAGAA ACACATCGAA TATAAAGAAT TTGGAGACAA CTCTTAGGGG
TATTGAGAGC CTACATTTCA ATGAAGAGAG GGTACATTAT TAGTAGCTAC CACTCTCGAT GATAACCTTT CTTTGTAAAT
TCTAAAAGGC TTATACTCTT TTTGATGAAC TGAGGAGTGG AATGTTGTCT ATGCATTGTG TTGAAGAAAA GCTGCGAACT
AGTAGGGAAG AATTATGACT TATTCCCCTT AAGTATACAA TAAAAAGATA TGTGTAGGCA GCTTCCTAAC TAAACTGACC
TTGTAAAAGG CTTCGTCTGT TCATACGGTT TGTGTCATAC TGACAAATGT TTTGCTTCTT CTCATTTGCA TCGTTTTCCC
TTATTGGTTT GATATTTGGT CATGTATGGT TCTCTTTTAA GCTACACTTT GGGAATAAAG CATATCATAT AATTTCATTG
ATAAACTATT AGTTGGGG

>Vigan.09G201600.01
ATGGAAACTC GAGTTGGGAA CAAGTTCCGT CTCGGTCGGA AAATTGGCAG CGGATCCTTC GGAGAGATCT ATCTCGGAAC
TAATTTTCAG ACGAATGAAG AGGTTGCGAT TAAGCTTGAA AGTGTGAAAA CCAAGCACCC TCAACTGTTG TATGAATCGA
AGCTGTATAA AATTCTGCAA GGAGGAAATG GGATTCCAAA TGTGAAATGG TACGGTGTTG AAGGAGAGTA CAACGTGCTC
GTGATGGATT TACTTGGCCC TAGTCTTGAG GATTTATTCA ACTTCTGTAG TCGGAAATTG TCTCTCAAAA CTGTTCTTAT
GCTTGCTGAT CAGATGATAA ATCGAGTTGA ATTTGTTCAT TCCAAATCAT TTTTACATCG CGACATCAAA CCAGACAACT
TCCTTATGGG TTTAGGAAGG CGTGCAAATC AAGTGTATAT CATTGACTTT GGCCTTGCTA AGAAATATAG AGACACCTCT
ACCCATCAGC ATATCCCATA CAGAGAGAAC AAGAATTTGA CAGGAACTGC TAGGTATGCT AGTATGAATA CTCATCTGGG
AATTGAGCAA AGCCGCAGGG ATGATTTAGA GTCACTTGGA TATGTTCTTA TGTACTTTTT AAGAGGAAGT CTGCCTTGGC
AGGGATTGAA AGCTGGTACT AAGAAGCAGA AGTACGAGAA GATTAGTGAG AAGAAAGTTT CTACTTCTAT TGAGTCTCTC
TGTCGTGGCT ATCCCTCAGA ATTTGCTTCA TACTTCCATT ACTGCCGGTC ACTGAGGTTT GATGACAAAC CAGATTATGC
TTATTTGAAA AGACTTCTGC GTGACCTTTT CATTCGTGAA GGGTTCCAGT TTGATTATGT CTTTGATTGG ACCATTTTGA
AATATCAGCA ATCTCAAAGT GCCACTGCCC CTGCCCGTGC TATTGGTCCT GCTGCTGGAC CAAGTTCAGG CGTGCCACCA
CTAGCGGCAA ATACTGATGG ACAGTTAGGT GGAGAGGATG GTAGGCATAA TAATTGGTCT TCATCAGATC CTACTCGTAG
GAGAAACCCT GTACCTTTTG CTAATGATGG CGTGTTATCG AGACAAAAGG GCCCAGTTAC ATATGACTCA ACTCAATCTA
AAGATGTTAT GTTGTCAAGC TCTAATTTTT TCCGGCCAAG TGGATCTGCA AGGCGAGGGG CTGTCTCAGG CAGCCGAGAA
TCCCGTGATG TAGTTGTTGG CAGTGAGACT GAGGCTTCTC GTCCTCTAAC TCTGGATTCA AGTCAGGGAG CACTTCGTAA
AATGTCTGTT CCTGGTGCTC AGAGAAGTTC AGCAATCACG TCTTCTGAGC ACAACCGTAC ATCCTCTGGC AGAAACACAT
CGAATATAAA GAATTTGGAG ACAACTCTTA GGGGTATTGA GAGCCTACAT TTCAATGAAG AGAGGGTACA TTATTAG

>Vigan.09G201600.01
METRVGNKFR LGRKIGSGSF GEIYLGTNFQ TNEEVAIKLE SVKTKHPQLL YESKLYKILQ GGNGIPNVKW YGVEGEYNVL
VMDLLGPSLE DLFNFCSRKL SLKTVLMLAD QMINRVEFVH SKSFLHRDIK PDNFLMGLGR RANQVYIIDF GLAKKYRDTS
THQHIPYREN KNLTGTARYA SMNTHLGIEQ SRRDDLESLG YVLMYFLRGS LPWQGLKAGT KKQKYEKISE KKVSTSIESL
CRGYPSEFAS YFHYCRSLRF DDKPDYAYLK RLLRDLFIRE GFQFDYVFDW TILKYQQSQS ATAPARAIGP AAGPSSGVPP
LAANTDGQLG GEDGRHNNWS SSDPTRRRNP VPFANDGVLS RQKGPVTYDS TQSKDVMLSS SNFFRPSGSA RRGAVSGSRE
SRDVVVGSET EASRPLTLDS SQGALRKMSV PGAQRSSAIT SSEHNRTSSG RNTSNIKNLE TTLRGIESLH FNEERVHY*