GBrowse Details

Vigan.09G208400.01

Basic Information:
Name: Vigan.09G208400.01
Multiple alignment
Variant Information
Position: Chr09:35347079..35349132 (- strand)
Length: 2054
Functional Information:
Description: Similar to phosphatase. [A4ZVI5, Phaseolus vulgaris]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: HAD-superfamily hydrolase, subfamily IB, PSPase-like (IPR006383)
Pyridoxal phosphate phosphatase-related (IPR006384)
Phosphatase PHOSPHO-type (IPR016965)
HAD-like domain (IPR023214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.51,96.03,44.75,10.26,37.24,3.34,1.87,3.25
Arabidopsis thaliana homolog: AT1G17710.1
Automatic updates:
Name: NM_001254485 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inorganic pyrophosphatase 2-like (LOC100785878), mRNA.
PubMed ID: 27815671 NCBI(pubmed)
Status: Known Variant
Name: NM_001353626 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max acid phosphatase ACP1 (ACP1), mRNA.
PubMed ID: 24391523 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr09:35347079..35347228 (- strand)
Length: 150
Type: three_prime_UTR
Position: Chr09:35347229..35347582 (- strand)
Length: 354
Type: CDS
Position: Chr09:35348117..35348318 (- strand)
Length: 202
Type: CDS
Position: Chr09:35348432..35348553 (- strand)
Length: 122
Type: CDS
Position: Chr09:35348790..35348927 (- strand)
Length: 138
Type: CDS
Position: Chr09:35348928..35349132 (- strand)
Length: 205
Type: five_prime_UTR


>Vigan.09G208400.01
ACGAACTATC CCTGTAATAT TCCTTCGGAA TCAAAGATTC CTTTTTTTTT TCTTCTTTCA CTCATATTCA CTATAAATAC
CCTTTTTCTC TTCCGAATGC AAAACCAAGC CAAGAACCAC CAATCTTGAA AGCACTTTAT ACACACCCAA ACAGAGCATT
AAGTTTTTTT TTTTTGTATT TTTTTCTCCA TTCCCAAAAC AGATTATGTC TGGAATCGTG ATTGTTTTCG ACTTTGACAA
AACCATTGTC GATGTCGACA GCGACAACTG GGTCGTCGAC GAATTGGGTT TTACCGATTT GTTCAACCAG CTTCTTCCGA
CCATGCCTTG GAACACTCTC ATGGACACAA TGATGATGGA GCTTCATTCA AATGGTAAAA CCATTAAGGA CATTGAAGAG
GTTCTGCGTA AGATTCCCTT GCACCCAAGA GTAATACCTG CTATCAAGGC AGCTCATGCT TTAGGGTGTG ATTTGAGGAT
TGTGAGTGAT GCAAACACGT TTTTCATTGA GACTATTTTG AAGCATTTGG GAATTAGAGA GTATTTCTCA GAAATCAATA
CAAACCCCGG TTATGTGAAT GAAGAAGGAA GGTTAAGGAT TCTGCCTTAC CATGACTTCA ACAAAGCTTC CCATGGCTGC
AATTTGTGTC CTCCAAACAT GTGCAAGGGT TTAGTGATAG AGAGAATTCA AGATTCAATA TCAGAAGAGG ATAAGAAGTT
CATCTATCTT GGAGATGGAA GTGGAGACTA TTGTCCAAGT TTGAGGTTGA AAGAGAAGGA CTTTATGATG CCAAGGAAGA
ACTTTCCGGT GTGGGATTTG ATATGCAGAG ATCCTTCACT TGTTAAGGCT GAGATTCATG GGTGGAGTGA TGGAGAAGAA
CTTGAACAAG TTTTGCTGCA CTTGATCAAC AAAGTATCAA TGGAGCAAAA TTCTCCCTTC ATTTCCTCTG ATTGCAAACT
TCAGACTCTG TCAGTCTCTG CTTTGGAGGC TTTGCCCAAA GTTCTACCAG TTCGGCCATA AACAGTTCTT AGTTTAGTGT
ATAAGAAAAA TGTATCATAA TAACTTTAAG GTTTTTTGTT TTTTCCGTTG ATTAACCTTC TCCAAAGCTA CACTAATGTT
GCTAATGTTG TAACTGGTCT AAGATGTGGA CCACTATAAT TTCTATCAAA T

>Vigan.09G208400.01
ATGTCTGGAA TCGTGATTGT TTTCGACTTT GACAAAACCA TTGTCGATGT CGACAGCGAC AACTGGGTCG TCGACGAATT
GGGTTTTACC GATTTGTTCA ACCAGCTTCT TCCGACCATG CCTTGGAACA CTCTCATGGA CACAATGATG ATGGAGCTTC
ATTCAAATGG TAAAACCATT AAGGACATTG AAGAGGTTCT GCGTAAGATT CCCTTGCACC CAAGAGTAAT ACCTGCTATC
AAGGCAGCTC ATGCTTTAGG GTGTGATTTG AGGATTGTGA GTGATGCAAA CACGTTTTTC ATTGAGACTA TTTTGAAGCA
TTTGGGAATT AGAGAGTATT TCTCAGAAAT CAATACAAAC CCCGGTTATG TGAATGAAGA AGGAAGGTTA AGGATTCTGC
CTTACCATGA CTTCAACAAA GCTTCCCATG GCTGCAATTT GTGTCCTCCA AACATGTGCA AGGGTTTAGT GATAGAGAGA
ATTCAAGATT CAATATCAGA AGAGGATAAG AAGTTCATCT ATCTTGGAGA TGGAAGTGGA GACTATTGTC CAAGTTTGAG
GTTGAAAGAG AAGGACTTTA TGATGCCAAG GAAGAACTTT CCGGTGTGGG ATTTGATATG CAGAGATCCT TCACTTGTTA
AGGCTGAGAT TCATGGGTGG AGTGATGGAG AAGAACTTGA ACAAGTTTTG CTGCACTTGA TCAACAAAGT ATCAATGGAG
CAAAATTCTC CCTTCATTTC CTCTGATTGC AAACTTCAGA CTCTGTCAGT CTCTGCTTTG GAGGCTTTGC CCAAAGTTCT
ACCAGTTCGG CCATAA

>Vigan.09G208400.01
MSGIVIVFDF DKTIVDVDSD NWVVDELGFT DLFNQLLPTM PWNTLMDTMM MELHSNGKTI KDIEEVLRKI PLHPRVIPAI
KAAHALGCDL RIVSDANTFF IETILKHLGI REYFSEINTN PGYVNEEGRL RILPYHDFNK ASHGCNLCPP NMCKGLVIER
IQDSISEEDK KFIYLGDGSG DYCPSLRLKE KDFMMPRKNF PVWDLICRDP SLVKAEIHGW SDGEELEQVL LHLINKVSME
QNSPFISSDC KLQTLSVSAL EALPKVLPVR P*