GBrowse Details

Vigan.09G210500.01

Basic Information:
Name: Vigan.09G210500.01
Multiple alignment
Variant Information
Position: Chr09:35557086..35562175 (+ strand)
Length: 5090
Functional Information:
Description: Similar to Glucose-6-phosphate 1-dehydrogenase. [V7ASK1, Phaseolus vulgaris]
GO: Biological Process: glucose metabolic process (GO:0006006)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: glucose-6-phosphate dehydrogenase activity (GO:0004345)
Molecular Function: NADP binding (GO:0050661)
InterPro: Glucose-6-phosphate dehydrogenase (IPR001282)
NAD(P)-binding domain (IPR016040)
Glucose-6-phosphate dehydrogenase, active site (IPR019796)
Glucose-6-phosphate dehydrogenase, NAD-binding (IPR022674)
Glucose-6-phosphate dehydrogenase, C-terminal (IPR022675)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.10,0.10,9.04,82.64,3.14,12.03,1.78,25.58
Arabidopsis thaliana homolog: AT1G09420.2, AT1G24280.1, AT5G13110.1, AT5G35790.1
Automatic updates:
Name: MN339556 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar SN14 chloroplast NADP+-dependent glucose-6-phosphate dehydrogenase 8 (G6PDH8) mRNA, complete cds; nuclear gene for chloroplast product.
PubMed ID: 32174950 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr09:35557086..35557319 (+ strand)
Length: 234
Type: five_prime_UTR
Position: Chr09:35557320..35557530 (+ strand)
Length: 211
Type: CDS
Position: Chr09:35558468..35558658 (+ strand)
Length: 191
Type: CDS
Position: Chr09:35558790..35558884 (+ strand)
Length: 95
Type: CDS
Position: Chr09:35559119..35559233 (+ strand)
Length: 115
Type: CDS
Position: Chr09:35559794..35559999 (+ strand)
Length: 206
Type: CDS
Position: Chr09:35560070..35560219 (+ strand)
Length: 150
Type: CDS
Position: Chr09:35560320..35560440 (+ strand)
Length: 121
Type: CDS
Position: Chr09:35560595..35560824 (+ strand)
Length: 230
Type: CDS
Position: Chr09:35560922..35561122 (+ strand)
Length: 201
Type: CDS
Position: Chr09:35561414..35561663 (+ strand)
Length: 250
Type: CDS
Position: Chr09:35561664..35562175 (+ strand)
Length: 512
Type: three_prime_UTR


>Vigan.09G210500.01
AGCAACCTTC CAATTTGAAG TGGTCCTTTC ACATATCCAA AGGCAATTTT GGCATGATGT CGCATTCATA AATCATAACA
CTAAAGATTT TAACCCTTTT ATTTTTCATC AACAATTAAC TATATTAACT GAACTCCCAC ACCTTGTTCA ACTTACTGTT
TCTGATCTTG GATTTTTACT TTGTTGCTCA GTTCTTATGG TTTTCTTCTG AAATCTTCAG TACCAACTTC TTGCATGGCC
AGTATTCTAG GTCCTTCTTT AAGCATAGTC AGGGCCTATG CATTAAGAAA TGAGCCACTA ATTGTCTCTA AAATCACTGC
AGTAGGAGAA AACTCTCATT CACCACTATG GTTTTCATGC ACTCGCGCTA GAAAATCTGC TAGAAACCAT TTCCAGCTCA
AATCCTCAAA TGGGCTTCCA CTGAATGCTG TCTCTTCAAA TGATGGTTTA GCTGGAACTT CGTTGGCTAA AGAAGATAGC
AAGCTCCAAC CACTTCCTGA ACTATTTCCA TTGTCAGACT CAGAATGTAC AGGATCCAAT CTTAGTATAA CAGTTGTTGG
AGCTTCTGGA GACCTTGCCA AAAAGAAGAT TTTTCCAGCA CTCTTTGCAC TCTTTTATGA AGATTGGCTA CCTGAGAATT
TTATTGTTTT TGGATTTGCT CGGACTAAAA TGACCGATGA AGAATTAAGG AACATGATTA GCAAAACCTT AACATGCAGA
ATTGACAAAA GAGAAAATTG CGAAGACAAA ATGGATCAGT TCTTAAAAAG ATGCTTTTAC CATTCTGGTC AATATAATTC
TGAGGAGCAC TTTTCAGAAT TGGATATCAA GCTGAAAGAG AAAGAGGGTG GAAAATTATC AAACAGATTG TTTTATTTGT
CAATACCTCC AAACATATTT GTGGATGTGG TGAGATGCGC TAGCCAAAAG GCTTCTTCCA GAGATGGATG GACAAGGGTT
ATCGTTGAAA AGCCATTTGG CCGTGACTCG GAATCATCTA GTGAGCTAAC AAAATGCTTG AAGCAGTACC TCACTGAAGA
CCAAATATTC AGGATTGACC ATTACTTGGG TAAGGAGCTT GTGGAGAATC TATCAGTGCT TCGCTTTTCA AATCTTGTTT
TTGAGCCTCT ATGGTCCCGG AATTACATTC GCAATGTGCA GATCATATTT TCTGAAGATT TTGGAACTGA AGGAAGAGGA
GGTTATTTTG ATCACTACGG AATCATTCGG GATATAATGC AAAATCATCT TCTGCAAATA CTAGCTTTGT TTGCAATGGA
AACACCAGTC AGCTTAGCTG CTGAGGACAT CAGAAATGAA AAGGTGAAGG TTCTGAGATC AATGAGACCA CTGCAGCTTG
AAAATGCTGT TGTTGGTCAA TACAAGGGCC ACAACAAGGG TGGAAAATCA TATCCTGCTT ATACGGATGA TGCAACTGTT
CCAACGGGTA GTCTTACTCC AACATTTGCA GCAGCAGCTC TTTTTATAGA CAATGCCAGA TGGGATGGGG TTCCTTTTCT
CATGAAAGCT GGCAAGGCTC TCCATACTAA ACGTGCAGAA ATCAGAGTAC AATTCAGACA CGTCCCAGGT AACTTGTACA
AGAGGAATTT TGGAACTGAT CTAGACAAGG CTACGAATGA GCTTGTGCTT CGTGTACAAC CTGATGAAGC TATATATTTG
AAAATCAACA ATAAAGTGCC AGGTCTGGGA ATGAGATTAG ACAGAAGTGA CTTGAATTTG CTTTTCCGAG CAAGGTATCC
AAGTGAAATA CCAGATGCAT ATGAGAGGTT ACTCCTAGAT GCCATTGAAG GAGAGCGAAG GCTGTTCATT AGAAGTGATG
AGCTTGATGC AGCTTGGGCA CTGTTCACTC CTTTGCTAAA AGAACTTGAA AACAAGAAGA TTGCTCCAGA GCTCTACCCC
TATGGTAGCA GAGGACCGGT TGGAGCACAT TACCTTGCTG CAAGGCACAA TGTTAGATGG GGAGATCTTG GTAATGAAGA
CTAATAAATG GCAGAGCTCT CCCATGATCA AGAACATTCA TTATCAATAC CTTTTCCATC ACATTATAGG ACAGCTACAC
AGCTTGTCTC ACTGATTGAA CTTATACAGT TGCATCAAGT TCATACAAAA ACCAAGTTCT CCTAATGTAG TTTACGGAAA
GACTCGGGTG TCAAATCCAA AGAGATGGGA TGAAATTTTA AATGATTTGT TTGTATAGAT TCAGTCCTAA AAAATAGAAG
CAAAGATGGG GGAATGATAA AATGAATTAA AATGCATGTA AACTAATATT TCTAATTCAA GGACTATTCC TAAAATGAGC
TATCACAGAA CAGTGTGCAT ATGCACTAAG TTGATGGCTA ATGCATTATG AAATGATGTT AGACTGGTTA GAAAATCAGA
ATGATTACTT AAAACTGTTA GAATGATGTA ATGTAATATG CTGGAATGCT TAGAATTATG AAAAACTATG CCTAATTACA
AAATCTCAAA CTGTTTGATG AAATGCTTGA TTGAAC

>Vigan.09G210500.01
ATGGCCAGTA TTCTAGGTCC TTCTTTAAGC ATAGTCAGGG CCTATGCATT AAGAAATGAG CCACTAATTG TCTCTAAAAT
CACTGCAGTA GGAGAAAACT CTCATTCACC ACTATGGTTT TCATGCACTC GCGCTAGAAA ATCTGCTAGA AACCATTTCC
AGCTCAAATC CTCAAATGGG CTTCCACTGA ATGCTGTCTC TTCAAATGAT GGTTTAGCTG GAACTTCGTT GGCTAAAGAA
GATAGCAAGC TCCAACCACT TCCTGAACTA TTTCCATTGT CAGACTCAGA ATGTACAGGA TCCAATCTTA GTATAACAGT
TGTTGGAGCT TCTGGAGACC TTGCCAAAAA GAAGATTTTT CCAGCACTCT TTGCACTCTT TTATGAAGAT TGGCTACCTG
AGAATTTTAT TGTTTTTGGA TTTGCTCGGA CTAAAATGAC CGATGAAGAA TTAAGGAACA TGATTAGCAA AACCTTAACA
TGCAGAATTG ACAAAAGAGA AAATTGCGAA GACAAAATGG ATCAGTTCTT AAAAAGATGC TTTTACCATT CTGGTCAATA
TAATTCTGAG GAGCACTTTT CAGAATTGGA TATCAAGCTG AAAGAGAAAG AGGGTGGAAA ATTATCAAAC AGATTGTTTT
ATTTGTCAAT ACCTCCAAAC ATATTTGTGG ATGTGGTGAG ATGCGCTAGC CAAAAGGCTT CTTCCAGAGA TGGATGGACA
AGGGTTATCG TTGAAAAGCC ATTTGGCCGT GACTCGGAAT CATCTAGTGA GCTAACAAAA TGCTTGAAGC AGTACCTCAC
TGAAGACCAA ATATTCAGGA TTGACCATTA CTTGGGTAAG GAGCTTGTGG AGAATCTATC AGTGCTTCGC TTTTCAAATC
TTGTTTTTGA GCCTCTATGG TCCCGGAATT ACATTCGCAA TGTGCAGATC ATATTTTCTG AAGATTTTGG AACTGAAGGA
AGAGGAGGTT ATTTTGATCA CTACGGAATC ATTCGGGATA TAATGCAAAA TCATCTTCTG CAAATACTAG CTTTGTTTGC
AATGGAAACA CCAGTCAGCT TAGCTGCTGA GGACATCAGA AATGAAAAGG TGAAGGTTCT GAGATCAATG AGACCACTGC
AGCTTGAAAA TGCTGTTGTT GGTCAATACA AGGGCCACAA CAAGGGTGGA AAATCATATC CTGCTTATAC GGATGATGCA
ACTGTTCCAA CGGGTAGTCT TACTCCAACA TTTGCAGCAG CAGCTCTTTT TATAGACAAT GCCAGATGGG ATGGGGTTCC
TTTTCTCATG AAAGCTGGCA AGGCTCTCCA TACTAAACGT GCAGAAATCA GAGTACAATT CAGACACGTC CCAGGTAACT
TGTACAAGAG GAATTTTGGA ACTGATCTAG ACAAGGCTAC GAATGAGCTT GTGCTTCGTG TACAACCTGA TGAAGCTATA
TATTTGAAAA TCAACAATAA AGTGCCAGGT CTGGGAATGA GATTAGACAG AAGTGACTTG AATTTGCTTT TCCGAGCAAG
GTATCCAAGT GAAATACCAG ATGCATATGA GAGGTTACTC CTAGATGCCA TTGAAGGAGA GCGAAGGCTG TTCATTAGAA
GTGATGAGCT TGATGCAGCT TGGGCACTGT TCACTCCTTT GCTAAAAGAA CTTGAAAACA AGAAGATTGC TCCAGAGCTC
TACCCCTATG GTAGCAGAGG ACCGGTTGGA GCACATTACC TTGCTGCAAG GCACAATGTT AGATGGGGAG ATCTTGGTAA
TGAAGACTAA 

>Vigan.09G210500.01
MASILGPSLS IVRAYALRNE PLIVSKITAV GENSHSPLWF SCTRARKSAR NHFQLKSSNG LPLNAVSSND GLAGTSLAKE
DSKLQPLPEL FPLSDSECTG SNLSITVVGA SGDLAKKKIF PALFALFYED WLPENFIVFG FARTKMTDEE LRNMISKTLT
CRIDKRENCE DKMDQFLKRC FYHSGQYNSE EHFSELDIKL KEKEGGKLSN RLFYLSIPPN IFVDVVRCAS QKASSRDGWT
RVIVEKPFGR DSESSSELTK CLKQYLTEDQ IFRIDHYLGK ELVENLSVLR FSNLVFEPLW SRNYIRNVQI IFSEDFGTEG
RGGYFDHYGI IRDIMQNHLL QILALFAMET PVSLAAEDIR NEKVKVLRSM RPLQLENAVV GQYKGHNKGG KSYPAYTDDA
TVPTGSLTPT FAAAALFIDN ARWDGVPFLM KAGKALHTKR AEIRVQFRHV PGNLYKRNFG TDLDKATNEL VLRVQPDEAI
YLKINNKVPG LGMRLDRSDL NLLFRARYPS EIPDAYERLL LDAIEGERRL FIRSDELDAA WALFTPLLKE LENKKIAPEL
YPYGSRGPVG AHYLAARHNV RWGDLGNED*