GBrowse Details

Vigan.09G224400.01

Basic Information:
Name: Vigan.09G224400.01
Multiple alignment
Variant Information
Position: Chr09:36610131..36611374 (- strand)
Length: 1244
Functional Information:
Description: Similar to Uncharacterized protein. [I1KH12, Glycine max]
InterPro: LURP1-like domain (IPR007612)
Tubby C-terminal-like domain (IPR025659)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:29.02,9.56,14.65,4.40,6.15,39.62,2.82,32.33
Automatic updates:
Name: NM_001317519 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein LURP-one-related (LOC100789078), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:36610131..36610300 (- strand)
Length: 170
Type: three_prime_UTR
Position: Chr09:36610301..36610735 (- strand)
Length: 435
Type: CDS
Position: Chr09:36610883..36611107 (- strand)
Length: 225
Type: CDS
Position: Chr09:36611108..36611374 (- strand)
Length: 267
Type: five_prime_UTR


>Vigan.09G224400.01
GTTTATGATG AGATAGTAGA AAAAATGAAA CCTTGCAGGG ATAAAATAAA ATAAAATAAG AAGCAGTGGT AATTACTGAA
AAGAAGAAAA CAACAAAAAC ACGAGTATGG TTCATTGATA CCTTTCCTTT TCCATTGCAA CTCAATTCTG CTTTCCGACT
ATATATATAT ATATAGATGA GAGTGAAAAA GTGAAAGGAA CATGGTCTTC TTCTCCATTC TCCATTCTCC GTTGTCGCAC
ATTCTGAAAT TCTGAAGAGA GAGAAGAATG GGAGAGGAAT TGGTGATGCA AGAAGGCTAC GTTGCCAATG AAGAGAGGTA
CCTCACAGTG CTTAAAACCT CTCTCTTCTT CAACGGTGAT GGCTTCGCTG TCTACGATTC CAAGGGTCAA CTCGTTTTCC
GCTTCGACTC CTATGGTCCA CGGTCACGTG ACAAAGACGA GCTTGTTCTC ATGGATCCCA ATGGCCGTTC TCTTCTTACT
CTGCGCCGGA AGAAGCCGAG TCTTCATCAG CGGTGGGAAG GGTTCAGAGG GGAGAGAAGG GAGGGAGAGA GAGCCGTTTT
CAGCGTGAAG AGATCGTCGA TCATCGGACG GTCGCGGACG AGCGTGGCGG TAGAGGTGTA CGATAGGGCT GGTGTGGAGT
ACCTGATCGA AGGGTGTTTC CGGCAGCGGT GGTGCAAGGT TTTGAATGCG GGGAAGGAAA CGGTGGCCGA GATTCGTCGC
AAGGTGGACC CCACCACTAG CGTTATGCTG GGGAAGGAAG TGTTTTGGCT TTGCGTGAAG CCTGGTTTTG ATGCGGCCTT
CGCCATGGGA TTGGTGTTGG TGCTTGATGA GATGAACGGT GAGAATTACT TTGACGATAG AATGGAAGAG CCTGTGGTGC
GCTCTGCCGC AGAGGATCCG GGACTGGTTT CACCTCTTCC AGTTTGAGAG AAATGCGTGT TTATTCTGAT GCTGACGTTA
TACTCACTCA TATTAGAAAC GTTTTTTTTT TAAATAATAA TGATAATGTT GTGGATGAAA TCACTTGGCA ATGTAGTACA
TTGTCATTTG CAAAGAACAC AAGGAAGAAC TGATCCTAAT TTCCCTTGTT ATTTCTC

>Vigan.09G224400.01
ATGGGAGAGG AATTGGTGAT GCAAGAAGGC TACGTTGCCA ATGAAGAGAG GTACCTCACA GTGCTTAAAA CCTCTCTCTT
CTTCAACGGT GATGGCTTCG CTGTCTACGA TTCCAAGGGT CAACTCGTTT TCCGCTTCGA CTCCTATGGT CCACGGTCAC
GTGACAAAGA CGAGCTTGTT CTCATGGATC CCAATGGCCG TTCTCTTCTT ACTCTGCGCC GGAAGAAGCC GAGTCTTCAT
CAGCGGTGGG AAGGGTTCAG AGGGGAGAGA AGGGAGGGAG AGAGAGCCGT TTTCAGCGTG AAGAGATCGT CGATCATCGG
ACGGTCGCGG ACGAGCGTGG CGGTAGAGGT GTACGATAGG GCTGGTGTGG AGTACCTGAT CGAAGGGTGT TTCCGGCAGC
GGTGGTGCAA GGTTTTGAAT GCGGGGAAGG AAACGGTGGC CGAGATTCGT CGCAAGGTGG ACCCCACCAC TAGCGTTATG
CTGGGGAAGG AAGTGTTTTG GCTTTGCGTG AAGCCTGGTT TTGATGCGGC CTTCGCCATG GGATTGGTGT TGGTGCTTGA
TGAGATGAAC GGTGAGAATT ACTTTGACGA TAGAATGGAA GAGCCTGTGG TGCGCTCTGC CGCAGAGGAT CCGGGACTGG
TTTCACCTCT TCCAGTTTGA 

>Vigan.09G224400.01
MGEELVMQEG YVANEERYLT VLKTSLFFNG DGFAVYDSKG QLVFRFDSYG PRSRDKDELV LMDPNGRSLL TLRRKKPSLH
QRWEGFRGER REGERAVFSV KRSSIIGRSR TSVAVEVYDR AGVEYLIEGC FRQRWCKVLN AGKETVAEIR RKVDPTTSVM
LGKEVFWLCV KPGFDAAFAM GLVLVLDEMN GENYFDDRME EPVVRSAAED PGLVSPLPV*