GBrowse Details

Vigan.09G226100.01

Basic Information:
Name: Vigan.09G226100.01
Multiple alignment
Variant Information
Position: Chr09:36714525..36717318 (- strand)
Length: 2794
Functional Information:
Description: Similar to Glycerol kinase. [Q6RUF8, Glycine max]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: glycerol-3-phosphate metabolic process (GO:0006072)
Molecular Function: glycerol kinase activity (GO:0004370)
Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773)
InterPro: Glycerol kinase (IPR005999)
Carbohydrate kinase, FGGY, conserved site (IPR018483)
Carbohydrate kinase, FGGY, N-terminal (IPR018484)
Carbohydrate kinase, FGGY, C-terminal (IPR018485)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:40.93,30.15,33.96,17.84,13.78,18.38,33.20,23.89
Arabidopsis thaliana homolog: AT1G80460.1
Automatic updates:
Name: NM_001250374 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glycerol kinase (GK), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:36714525..36714765 (- strand)
Length: 241
Type: three_prime_UTR
Position: Chr09:36714766..36715011 (- strand)
Length: 246
Type: CDS
Position: Chr09:36715223..36716174 (- strand)
Length: 952
Type: CDS
Position: Chr09:36716650..36717005 (- strand)
Length: 356
Type: CDS
Position: Chr09:36717006..36717318 (- strand)
Length: 313
Type: five_prime_UTR


>Vigan.09G226100.01
CATATATTTT CTGTTTGAAT CCATGGATCT TCTTGATTTT TCCCTTTAAT GCGGAAATGC TTGGTGTAAC AAATAGGATA
ATATAATATA ATATGGAGGG ATAAATTCTG GAACCGATGA TCCAATTTTC TAAAAACAAG GACAGCTTTC CGAGGAACCC
GTGTTGGATG TGGCGTTCTG GTCAACTCTG ATAAATCAAT CAAAGTGAAA AAACGCAGAG GCATTTGATT TGTTTGGCAG
TGGCAAAGGT TTTGTGTTGT GTTTTTTGTG TTGTGTTCTT TTGAGTTGAT AAGCATCGAC AACATCGAAA ACGATGTCGT
GCGAGGATGT GTTCATTGGC GCCATCGACC AAGGTACGAC CAGCAGCAGG TTCATAATCT ACGACGGGTC GAGTAAAGCC
ATCGGAATCC ACCACGTGGA GTTCACGCAG TTCTACCCGC AACCCGGGTG GGTGGAGCAT GACCCGATGG AGATCTTGGA
GAGCGTGAAG GTGTGCGTGG CCAAAGCAGT CGACAAGGCC ACCGCCGATG GCTTCAACGT CGACAAGGGA CTCAAGGCCA
TCGGTCTCAC CAATCAGAGA GAAACCGCTC TCGTCTGGAG CAAATCCACC GGTCTCCCTT TCTACAACGC CATCGTTTGG
ATGGATGGTC GTACTTCTTC CATTTGCAGG AGACTGGAAA AAGAGTTATC CGGCGGTAGA ACCCATTTTG TGGAGAAGTG
TGGCTTGCCT ATTAGCACAT ACTTTAGTGC AGTGAAATTA CTGTGGCTGA TAGAAAATGT GAGTGCCGTG AAGGAGGCTA
TAGAGAAAAA GGATGCGCTG TTTGGAACTA TAGATACTTG GTTGATATGG AATTTAACTG GTGGGGTAAA GGGGGGATTG
CATGTTACTG ATGTTTCTAA CGCATCTCGT ACAATGTTCA TGAATCTAAG AACCCTGCAG TGGGACGAAA CTATATTGGA
AACTCTTAAA ATTCCTGCTG AAATTTTGCC TAAAATTGTT AGTAATTCTG AAGTTATAGG AGATATTGCG GCTGGATGGC
CAATTACTGG TATCCCTATT GCTGGATGTT TAGGGGATCA GCATGCTGCC ATGTTAGGAC AATCATGCCG TAAGGGGGAG
GCTAAAAGCA CTTATGGCAC AGGTGCTTTT ATATTACTGA ATACTGGTGA AGGGATAGTT AAATCAAAAC ACGGTCTTCT
AACCACATTA GCCTACAAGC TTGGCCCAAA TGCTCCAACC AATTATGCAT TGGAAGGATC AGTTGCTATT GCTGGAGCTG
CAGTGCAATG GCTTAGAGAC GGTCTTGGCC TCATTTCCTC TGCTTCGGAG ATAGAGGAGC TGGCATCACA GGTTGATTCC
ACTGGTGGGA TTTACTTTGT TCCTGCTTTT AGTGGATTGT TTGCTCCATG GTGGCGTGAT GATGCTCGTG GTGTTATTGT
TGGAATGACA AGGATCACAA ACAAAGCCCA CATTGCTCGA GCCGTGCTTG AGAGCATGTG TTTCCAAGTG AAAGATGTCT
TGGATTCAAT GCACAAAGAT TCAACACAAG ATTCCAAAGA GGAATCCTTG CTTAGAGTGG ATGGTGGTGC AACTGTTAAC
AACCTCTTGA TGCAGACTCA GGCAGATTTG TTGGGAAGTT CAGTAGTTAG ACCTGTTGAC ATAGAGACCA CAGCACTTGG
AGCAGCCTAT GCTGCAGGGT TGGCTATTGG GGTTTGGAAA GAAGATCATA TTTTCAATTC CCAGGAAAAG ATGAAGAATG
CTAAAGTTTT CCGTCCCATA ATGTCTGAGG AAGTAAGGAA AAAGAAATTT GAATCTTGGT GCAAAGCTGT TAGTAAAACT
TTTGACTTAG CTGATCTTGC TCTTTGATTG TCTTTTTACC ATTTATCTTT TTAAATGTCC TTCACTTCTG CTTATAAGTT
GAAGGGAACA ATTATGTTAA TTATCAAATA AATTTTACAT TACTTTTCTA TGTTGTTCTT GTATTTTGGA GAAGAAATAA
AAACATTATA TAAAATAGAA TAGAAGATTT AGAGGAGAGT GGTAGTTTCT TAATAATGTT TTCTATTTAG CTCTGAAAAT
TCTGGAATCA GCATTTAAGG AAATGACA

>Vigan.09G226100.01
ATGTCGTGCG AGGATGTGTT CATTGGCGCC ATCGACCAAG GTACGACCAG CAGCAGGTTC ATAATCTACG ACGGGTCGAG
TAAAGCCATC GGAATCCACC ACGTGGAGTT CACGCAGTTC TACCCGCAAC CCGGGTGGGT GGAGCATGAC CCGATGGAGA
TCTTGGAGAG CGTGAAGGTG TGCGTGGCCA AAGCAGTCGA CAAGGCCACC GCCGATGGCT TCAACGTCGA CAAGGGACTC
AAGGCCATCG GTCTCACCAA TCAGAGAGAA ACCGCTCTCG TCTGGAGCAA ATCCACCGGT CTCCCTTTCT ACAACGCCAT
CGTTTGGATG GATGGTCGTA CTTCTTCCAT TTGCAGGAGA CTGGAAAAAG AGTTATCCGG CGGTAGAACC CATTTTGTGG
AGAAGTGTGG CTTGCCTATT AGCACATACT TTAGTGCAGT GAAATTACTG TGGCTGATAG AAAATGTGAG TGCCGTGAAG
GAGGCTATAG AGAAAAAGGA TGCGCTGTTT GGAACTATAG ATACTTGGTT GATATGGAAT TTAACTGGTG GGGTAAAGGG
GGGATTGCAT GTTACTGATG TTTCTAACGC ATCTCGTACA ATGTTCATGA ATCTAAGAAC CCTGCAGTGG GACGAAACTA
TATTGGAAAC TCTTAAAATT CCTGCTGAAA TTTTGCCTAA AATTGTTAGT AATTCTGAAG TTATAGGAGA TATTGCGGCT
GGATGGCCAA TTACTGGTAT CCCTATTGCT GGATGTTTAG GGGATCAGCA TGCTGCCATG TTAGGACAAT CATGCCGTAA
GGGGGAGGCT AAAAGCACTT ATGGCACAGG TGCTTTTATA TTACTGAATA CTGGTGAAGG GATAGTTAAA TCAAAACACG
GTCTTCTAAC CACATTAGCC TACAAGCTTG GCCCAAATGC TCCAACCAAT TATGCATTGG AAGGATCAGT TGCTATTGCT
GGAGCTGCAG TGCAATGGCT TAGAGACGGT CTTGGCCTCA TTTCCTCTGC TTCGGAGATA GAGGAGCTGG CATCACAGGT
TGATTCCACT GGTGGGATTT ACTTTGTTCC TGCTTTTAGT GGATTGTTTG CTCCATGGTG GCGTGATGAT GCTCGTGGTG
TTATTGTTGG AATGACAAGG ATCACAAACA AAGCCCACAT TGCTCGAGCC GTGCTTGAGA GCATGTGTTT CCAAGTGAAA
GATGTCTTGG ATTCAATGCA CAAAGATTCA ACACAAGATT CCAAAGAGGA ATCCTTGCTT AGAGTGGATG GTGGTGCAAC
TGTTAACAAC CTCTTGATGC AGACTCAGGC AGATTTGTTG GGAAGTTCAG TAGTTAGACC TGTTGACATA GAGACCACAG
CACTTGGAGC AGCCTATGCT GCAGGGTTGG CTATTGGGGT TTGGAAAGAA GATCATATTT TCAATTCCCA GGAAAAGATG
AAGAATGCTA AAGTTTTCCG TCCCATAATG TCTGAGGAAG TAAGGAAAAA GAAATTTGAA TCTTGGTGCA AAGCTGTTAG
TAAAACTTTT GACTTAGCTG ATCTTGCTCT TTGA

>Vigan.09G226100.01
MSCEDVFIGA IDQGTTSSRF IIYDGSSKAI GIHHVEFTQF YPQPGWVEHD PMEILESVKV CVAKAVDKAT ADGFNVDKGL
KAIGLTNQRE TALVWSKSTG LPFYNAIVWM DGRTSSICRR LEKELSGGRT HFVEKCGLPI STYFSAVKLL WLIENVSAVK
EAIEKKDALF GTIDTWLIWN LTGGVKGGLH VTDVSNASRT MFMNLRTLQW DETILETLKI PAEILPKIVS NSEVIGDIAA
GWPITGIPIA GCLGDQHAAM LGQSCRKGEA KSTYGTGAFI LLNTGEGIVK SKHGLLTTLA YKLGPNAPTN YALEGSVAIA
GAAVQWLRDG LGLISSASEI EELASQVDST GGIYFVPAFS GLFAPWWRDD ARGVIVGMTR ITNKAHIARA VLESMCFQVK
DVLDSMHKDS TQDSKEESLL RVDGGATVNN LLMQTQADLL GSSVVRPVDI ETTALGAAYA AGLAIGVWKE DHIFNSQEKM
KNAKVFRPIM SEEVRKKKFE SWCKAVSKTF DLADLAL*