GBrowse Details

Vigan.09G234000.01

Basic Information:
Name: Vigan.09G234000.01
Multiple alignment
Variant Information
Position: Chr09:37228899..37236874 (- strand)
Length: 7976
Functional Information:
Description: Similar to beta-amyrin synthase isoform X1. [XP_006582958.1, Glycine max]
GO: Molecular Function: catalytic activity (GO:0003824)
Molecular Function: intramolecular transferase activity (GO:0016866)
InterPro: Prenyltransferase/squalene oxidase (IPR001330)
Terpene synthase, conserved site (IPR002365)
Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid (IPR008930)
Squalene cyclase (IPR018333)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.09,0.07,57.12,19.67,16.43,30.07,29.04,22.70
Arabidopsis thaliana homolog: AT1G66960.1, AT1G78500.1, AT1G78950.1, AT1G78955.1, AT1G78960.1, AT1G78970.2, AT2G07050.1, AT3G29255.1, AT3G45130.1, AT4G15340.1, AT4G15370.1, AT5G36150.1, AT5G42600.1, AT5G48010.2
Automatic updates:
Name: OP795925 NCBI(nuccore)
Organism: Vigna unguiculata
Description: Vigna unguiculata beta-amyrin synthase (bAS) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:37228899..37229253 (- strand)
Length: 355
Type: three_prime_UTR
Position: Chr09:37229254..37229370 (- strand)
Length: 117
Type: CDS
Position: Chr09:37229497..37229580 (- strand)
Length: 84
Type: CDS
Position: Chr09:37229696..37229776 (- strand)
Length: 81
Type: CDS
Position: Chr09:37229866..37230234 (- strand)
Length: 369
Type: CDS
Position: Chr09:37230320..37230376 (- strand)
Length: 57
Type: CDS
Position: Chr09:37230489..37230587 (- strand)
Length: 99
Type: CDS
Position: Chr09:37230668..37230790 (- strand)
Length: 123
Type: CDS
Position: Chr09:37230909..37231028 (- strand)
Length: 120
Type: CDS
Position: Chr09:37231115..37231228 (- strand)
Length: 114
Type: CDS
Position: Chr09:37231332..37231523 (- strand)
Length: 192
Type: CDS
Position: Chr09:37231613..37231779 (- strand)
Length: 167
Type: CDS
Position: Chr09:37231859..37231943 (- strand)
Length: 85
Type: CDS
Position: Chr09:37232048..37232245 (- strand)
Length: 198
Type: CDS
Position: Chr09:37232403..37232492 (- strand)
Length: 90
Type: CDS
Position: Chr09:37236212..37236397 (- strand)
Length: 186
Type: CDS
Position: Chr09:37236568..37236768 (- strand)
Length: 201
Type: CDS
Position: Chr09:37236769..37236874 (- strand)
Length: 106
Type: five_prime_UTR


>Vigan.09G234000.01
GCATGAGATG GAAGAAAGAG GTTGAGGAAG CGAAGGGAAG GAAGTATAAT GGAATCACTG TGATAGATTT GATTTGAATA
GAATTGAATT GAATTGTTGT GAGAGGATGT GGAGACTGAA GGTGGCAGAT GGTGGAAAGG ATCCTTACAT TTTCAGCACA
AACAATTTCG TAGGAAGACA GATATGGGAG TATGATCCAG ACGCCGGTAG CAGCGAGGAA CGCGCCGAGG TGGAGGCAGC
CAGAAACAAT TTCTACCAAA ATCGCTTCAA GGTCAAGCCC TGTGCTGACC TCCTTTGGCG CTTTCAGGTT CTGAGAGAGA
ATAACTTCAA ACAAACAATT CCTAATGTGA AGATAGAAGA CGGAGAAGAA ATAACTTACG AGAAAGTGAC GGCAGCTGTT
AAAAGAGGCG CATATCATCT ATCAGCATTG CAGACCAGTG ATGGCCATTG GCCTGCGCAA ATTGCAGGTC CTCTGTTTTT
CCTTCCTCCT CTCGTATTCT GCATGTATAT TACAGGGCAT CTGGAATCAG TATTTCCAGA AGAGCATCAG AAAGAAATTC
TCCGCTATAT ATACTATCAC CAGAATGAAG ATGGAGGATG GGGACTACAT ATTGAGGGTC ACAGCACCAT GTTTTGTACT
GCACTGAATT ATATATGTAT GCGGATTCTT GGAGAAGGAC CCAATGGAGG TCATGACAAT GCTTGTGCTA GGGCAAGAAA
GTGGATTCAA GATCATGGAA GTGTAACACA CATACCTTCA TGGGGGAAAA CTTGGCTTTC GATACTTGGT GTATTTGATT
GGTGTGGAAG TAACCCAATG CCTCCAGAGT TTTGGATCCT TCCTTCCTTT CTTCCTATGC ATCCGGCTAA GATGTGGTGT
TACTGTCGAT TGGTGTACAT GCCTATGTCT TACTTATATG GAAAGAGGTT TGTTGGTCCA ATTACGCCTC TCATTTTACA
ATTGAGAGAA GAACTATTTA CAGAACCCTA TGAAAAAGTT AACTGGAAGA AAGCGCGTCA CCAATGTGCA AAGGAAGATC
TATACTATCC TCATCCTTTG ATACAAGATC TAATATGGGA CAGTTTATAC ATATTTACGG AGCCATTACT AACTCGTTGG
CCTTTCAACA AGCTGGTTAG AGAAAAAGCT CTTCAGGTGA CAATGAAACA TATTCATTAC GAAGATGAGA CCAGTCGATA
CATTACCATT GGTTGCGTGG AAAAGGTTTT ATGCATGCTT GCTTGTTGGG TGGAAGATCC AAATGGAGAT GCTTTCAAGA
AGCATCTTGC AAGGGTGCCA GATTACTTGT GGATGTCTGA AGATGGAATG ACCATGCAGA GTTTTGGCAG TCAAGAATGG
GATGCTGGTT TTGCAGTTCA AGCTTTGCTT GCCACTAACC TAGTTGAGGA AATTGGTCCA GCACTAGCAA AAGGGCATTA
TTTCATTAAG GAGTCTCAGG TAAGGGATAA CCCTTTTGGA GATTTCAAGG GTATGTATCG TCATATTTCA AAAGGATCTT
GGACATTCTC TGATCAAGAC CATGGATGGC AAGTTTCTGA TTGCACAGCG GAAGGCTTGA AGTGTTGTCT ACTTCTATCC
ATGTTGCCAC CAGAGATTGT GGGAGAAAAG ATGGAACCCC AAAGGTTATA TGATTCAGTC AATGTCCTAT TGTCGCTTCA
GAGTAAAAAG GGTGGTTTAG CTGCATGGGA GCCTCCGGGA GCTCAAGATT GGTTAGAATT ACTGAATCCG ACGGAATTTT
TTGCGGACAT TGTGGTTGAA CACGAATACG TTGAGTGCAC TGGATCTGCA ATTCAAGCTT TAGTTTTGTT CAAGAAGTTG
TATCCAGGGC ATAGGAAGAA AGAGATAGAG AATTTCATAA TCAACGCAGT TCGATTCCTG GAAAATACAC AAACAGGTGA
TGGTTCGTGG TACGGAAATT GGGGAGTTTG CTTCACTTAC GGTTCTTGGT TCGCACTTGG AGGTCTATCA GCTGCTGGCA
AGACTTACAC CAATTGTGCT GCTATTCGTA AAGCCGTTAA ATTTCTGCTC ACAACACAGA GGGAGGACGG TGGATGGGGG
GAGAGTTATC TTTCAAGCCC AAAAAAGATT TATGTACCGC TAGAAGGAAG TCGATCAAAT GTTGTTCATA CAGCATGGGC
TCTCATGGGA CTCATTCATG CTGGACAGGC AGACAGAGAC CCTACTCCTC TTCATCGTGC TGCAAAGTTG CTCATCAATT
CTCAGTTGGA AGAGGGTGAT TGGCCCCAAC AGGAAATCAC TGGAGTATTC ATGAAAAATT GCATGTTGCA TTATCCAATG
TACAGAGATA TTTATCCAAT GTGGGCTTTA GCTGAATATC GTAGACGAGT TTCGTTGCCT TCCGATTAAG CATAAAAAAG
ACATTCATAT CGATGAAGAC TGTGGCAAGA AAAATCAAAG AGTTGCGCAA TCAGGCTTAA TCAATTTTCT CCTTGGCACA
ATTTTTTATT TCATGTTGGT TTGAATATGT ATAGATGCTC TTCAATGTTC CTCCTACGAT GCAAACATAA ATTTATTACA
ATAATGTGCA TCTACCATCA GAGGGCTATG AAGAACATAA AAATGTCACT AAGGTAATTC ATTTTTCATT CATGCCCAAT
AAATAATGCA GAGCCTACAT TAACTACGCC ATCCTCTACA AATAACATTA TATAAATTCA AAATATATTT TTAATAAAAT
AATACATTTC AGATTATCCA ATAC

>Vigan.09G234000.01
ATGTGGAGAC TGAAGGTGGC AGATGGTGGA AAGGATCCTT ACATTTTCAG CACAAACAAT TTCGTAGGAA GACAGATATG
GGAGTATGAT CCAGACGCCG GTAGCAGCGA GGAACGCGCC GAGGTGGAGG CAGCCAGAAA CAATTTCTAC CAAAATCGCT
TCAAGGTCAA GCCCTGTGCT GACCTCCTTT GGCGCTTTCA GGTTCTGAGA GAGAATAACT TCAAACAAAC AATTCCTAAT
GTGAAGATAG AAGACGGAGA AGAAATAACT TACGAGAAAG TGACGGCAGC TGTTAAAAGA GGCGCATATC ATCTATCAGC
ATTGCAGACC AGTGATGGCC ATTGGCCTGC GCAAATTGCA GGTCCTCTGT TTTTCCTTCC TCCTCTCGTA TTCTGCATGT
ATATTACAGG GCATCTGGAA TCAGTATTTC CAGAAGAGCA TCAGAAAGAA ATTCTCCGCT ATATATACTA TCACCAGAAT
GAAGATGGAG GATGGGGACT ACATATTGAG GGTCACAGCA CCATGTTTTG TACTGCACTG AATTATATAT GTATGCGGAT
TCTTGGAGAA GGACCCAATG GAGGTCATGA CAATGCTTGT GCTAGGGCAA GAAAGTGGAT TCAAGATCAT GGAAGTGTAA
CACACATACC TTCATGGGGG AAAACTTGGC TTTCGATACT TGGTGTATTT GATTGGTGTG GAAGTAACCC AATGCCTCCA
GAGTTTTGGA TCCTTCCTTC CTTTCTTCCT ATGCATCCGG CTAAGATGTG GTGTTACTGT CGATTGGTGT ACATGCCTAT
GTCTTACTTA TATGGAAAGA GGTTTGTTGG TCCAATTACG CCTCTCATTT TACAATTGAG AGAAGAACTA TTTACAGAAC
CCTATGAAAA AGTTAACTGG AAGAAAGCGC GTCACCAATG TGCAAAGGAA GATCTATACT ATCCTCATCC TTTGATACAA
GATCTAATAT GGGACAGTTT ATACATATTT ACGGAGCCAT TACTAACTCG TTGGCCTTTC AACAAGCTGG TTAGAGAAAA
AGCTCTTCAG GTGACAATGA AACATATTCA TTACGAAGAT GAGACCAGTC GATACATTAC CATTGGTTGC GTGGAAAAGG
TTTTATGCAT GCTTGCTTGT TGGGTGGAAG ATCCAAATGG AGATGCTTTC AAGAAGCATC TTGCAAGGGT GCCAGATTAC
TTGTGGATGT CTGAAGATGG AATGACCATG CAGAGTTTTG GCAGTCAAGA ATGGGATGCT GGTTTTGCAG TTCAAGCTTT
GCTTGCCACT AACCTAGTTG AGGAAATTGG TCCAGCACTA GCAAAAGGGC ATTATTTCAT TAAGGAGTCT CAGGTAAGGG
ATAACCCTTT TGGAGATTTC AAGGGTATGT ATCGTCATAT TTCAAAAGGA TCTTGGACAT TCTCTGATCA AGACCATGGA
TGGCAAGTTT CTGATTGCAC AGCGGAAGGC TTGAAGTGTT GTCTACTTCT ATCCATGTTG CCACCAGAGA TTGTGGGAGA
AAAGATGGAA CCCCAAAGGT TATATGATTC AGTCAATGTC CTATTGTCGC TTCAGAGTAA AAAGGGTGGT TTAGCTGCAT
GGGAGCCTCC GGGAGCTCAA GATTGGTTAG AATTACTGAA TCCGACGGAA TTTTTTGCGG ACATTGTGGT TGAACACGAA
TACGTTGAGT GCACTGGATC TGCAATTCAA GCTTTAGTTT TGTTCAAGAA GTTGTATCCA GGGCATAGGA AGAAAGAGAT
AGAGAATTTC ATAATCAACG CAGTTCGATT CCTGGAAAAT ACACAAACAG GTGATGGTTC GTGGTACGGA AATTGGGGAG
TTTGCTTCAC TTACGGTTCT TGGTTCGCAC TTGGAGGTCT ATCAGCTGCT GGCAAGACTT ACACCAATTG TGCTGCTATT
CGTAAAGCCG TTAAATTTCT GCTCACAACA CAGAGGGAGG ACGGTGGATG GGGGGAGAGT TATCTTTCAA GCCCAAAAAA
GATTTATGTA CCGCTAGAAG GAAGTCGATC AAATGTTGTT CATACAGCAT GGGCTCTCAT GGGACTCATT CATGCTGGAC
AGGCAGACAG AGACCCTACT CCTCTTCATC GTGCTGCAAA GTTGCTCATC AATTCTCAGT TGGAAGAGGG TGATTGGCCC
CAACAGGAAA TCACTGGAGT ATTCATGAAA AATTGCATGT TGCATTATCC AATGTACAGA GATATTTATC CAATGTGGGC
TTTAGCTGAA TATCGTAGAC GAGTTTCGTT GCCTTCCGAT TAA

>Vigan.09G234000.01
MWRLKVADGG KDPYIFSTNN FVGRQIWEYD PDAGSSEERA EVEAARNNFY QNRFKVKPCA DLLWRFQVLR ENNFKQTIPN
VKIEDGEEIT YEKVTAAVKR GAYHLSALQT SDGHWPAQIA GPLFFLPPLV FCMYITGHLE SVFPEEHQKE ILRYIYYHQN
EDGGWGLHIE GHSTMFCTAL NYICMRILGE GPNGGHDNAC ARARKWIQDH GSVTHIPSWG KTWLSILGVF DWCGSNPMPP
EFWILPSFLP MHPAKMWCYC RLVYMPMSYL YGKRFVGPIT PLILQLREEL FTEPYEKVNW KKARHQCAKE DLYYPHPLIQ
DLIWDSLYIF TEPLLTRWPF NKLVREKALQ VTMKHIHYED ETSRYITIGC VEKVLCMLAC WVEDPNGDAF KKHLARVPDY
LWMSEDGMTM QSFGSQEWDA GFAVQALLAT NLVEEIGPAL AKGHYFIKES QVRDNPFGDF KGMYRHISKG SWTFSDQDHG
WQVSDCTAEG LKCCLLLSML PPEIVGEKME PQRLYDSVNV LLSLQSKKGG LAAWEPPGAQ DWLELLNPTE FFADIVVEHE
YVECTGSAIQ ALVLFKKLYP GHRKKEIENF IINAVRFLEN TQTGDGSWYG NWGVCFTYGS WFALGGLSAA GKTYTNCAAI
RKAVKFLLTT QREDGGWGES YLSSPKKIYV PLEGSRSNVV HTAWALMGLI HAGQADRDPT PLHRAAKLLI NSQLEEGDWP
QQEITGVFMK NCMLHYPMYR DIYPMWALAE YRRRVSLPSD *